Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.66■■■□□ 2.5
TTC30AQ86WT1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TTC30AQ86WT1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TTC30AQ86WT1 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.61■■■□□ 2.49
TTC30AQ86WT1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TTC30AQ86WT1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.57■■■□□ 2.48
TTC30AQ86WT1 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
TTC30AQ86WT1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.53■■■□□ 2.48
TTC30AQ86WT1 AP002365.1-201ENST00000603448 772 ntBASIC30.52■■■□□ 2.48
TTC30AQ86WT1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
TTC30AQ86WT1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
TTC30AQ86WT1 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
TTC30AQ86WT1 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.38■■■□□ 2.45
TTC30AQ86WT1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
TTC30AQ86WT1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TTC30AQ86WT1 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.37■■■□□ 2.45
TTC30AQ86WT1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.37■■■□□ 2.45
TTC30AQ86WT1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TTC30AQ86WT1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TTC30AQ86WT1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TTC30AQ86WT1 DYNLL1-208ENST00000550178 581 ntBASIC30.35■■■□□ 2.45
TTC30AQ86WT1 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.35■■■□□ 2.45
TTC30AQ86WT1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.35■■■□□ 2.45
TTC30AQ86WT1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TTC30AQ86WT1 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.34■■■□□ 2.45
TTC30AQ86WT1 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TTC30AQ86WT1 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
TTC30AQ86WT1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.32■■■□□ 2.44
TTC30AQ86WT1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.32■■■□□ 2.44
TTC30AQ86WT1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TTC30AQ86WT1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.31■■■□□ 2.44
TTC30AQ86WT1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
TTC30AQ86WT1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
TTC30AQ86WT1 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
TTC30AQ86WT1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.24■■■□□ 2.43
TTC30AQ86WT1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.23■■■□□ 2.43
TTC30AQ86WT1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
TTC30AQ86WT1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.22■■■□□ 2.43
TTC30AQ86WT1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
TTC30AQ86WT1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
TTC30AQ86WT1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
TTC30AQ86WT1 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
TTC30AQ86WT1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
TTC30AQ86WT1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.17■■■□□ 2.42
TTC30AQ86WT1 AL031258.1-201ENST00000623562 325 ntBASIC30.14■■■□□ 2.42
TTC30AQ86WT1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
TTC30AQ86WT1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.08■■■□□ 2.41
TTC30AQ86WT1 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
TTC30AQ86WT1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
TTC30AQ86WT1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TTC30AQ86WT1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
TTC30AQ86WT1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30■■■□□ 2.39
TTC30AQ86WT1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
TTC30AQ86WT1 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.99■■■□□ 2.39
TTC30AQ86WT1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
TTC30AQ86WT1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.98■■■□□ 2.39
TTC30AQ86WT1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.98■■■□□ 2.39
TTC30AQ86WT1 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
TTC30AQ86WT1 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
TTC30AQ86WT1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
TTC30AQ86WT1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.93■■■□□ 2.38
TTC30AQ86WT1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
TTC30AQ86WT1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
TTC30AQ86WT1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.91■■■□□ 2.38
TTC30AQ86WT1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
TTC30AQ86WT1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.87■■■□□ 2.37
TTC30AQ86WT1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
TTC30AQ86WT1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.86■■■□□ 2.37
TTC30AQ86WT1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.86■■■□□ 2.37
TTC30AQ86WT1 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.85■■■□□ 2.37
TTC30AQ86WT1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TTC30AQ86WT1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
TTC30AQ86WT1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.8■■■□□ 2.36
TTC30AQ86WT1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TTC30AQ86WT1 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TTC30AQ86WT1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.79■■■□□ 2.36
TTC30AQ86WT1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.79■■■□□ 2.36
TTC30AQ86WT1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
TTC30AQ86WT1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
TTC30AQ86WT1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TTC30AQ86WT1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.73■■■□□ 2.35
TTC30AQ86WT1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TTC30AQ86WT1 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
TTC30AQ86WT1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.68■■■□□ 2.34
TTC30AQ86WT1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.67■■■□□ 2.34
TTC30AQ86WT1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
TTC30AQ86WT1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
TTC30AQ86WT1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
TTC30AQ86WT1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
TTC30AQ86WT1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
TTC30AQ86WT1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
TTC30AQ86WT1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
TTC30AQ86WT1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
TTC30AQ86WT1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
TTC30AQ86WT1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.55■■■□□ 2.32
TTC30AQ86WT1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TTC30AQ86WT1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TTC30AQ86WT1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TTC30AQ86WT1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.53■■■□□ 2.32
TTC30AQ86WT1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.53■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms