Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.87■■■□□ 2.53
LRRTM3Q86VH5 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
LRRTM3Q86VH5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.85■■■□□ 2.53
LRRTM3Q86VH5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
LRRTM3Q86VH5 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
LRRTM3Q86VH5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
LRRTM3Q86VH5 AL031258.1-201ENST00000623562 325 ntBASIC30.75■■■□□ 2.51
LRRTM3Q86VH5 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
LRRTM3Q86VH5 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
LRRTM3Q86VH5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
LRRTM3Q86VH5 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.72■■■□□ 2.51
LRRTM3Q86VH5 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
LRRTM3Q86VH5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
LRRTM3Q86VH5 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.71■■■□□ 2.51
LRRTM3Q86VH5 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
LRRTM3Q86VH5 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LRRTM3Q86VH5 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.66■■■□□ 2.5
LRRTM3Q86VH5 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.64■■■□□ 2.5
LRRTM3Q86VH5 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LRRTM3Q86VH5 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
LRRTM3Q86VH5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
LRRTM3Q86VH5 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
LRRTM3Q86VH5 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
LRRTM3Q86VH5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.55■■■□□ 2.48
LRRTM3Q86VH5 AC145285.7-201ENST00000614819 1539 ntBASIC30.54■■■□□ 2.48
LRRTM3Q86VH5 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
LRRTM3Q86VH5 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
LRRTM3Q86VH5 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
LRRTM3Q86VH5 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
LRRTM3Q86VH5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.46
LRRTM3Q86VH5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.42■■■□□ 2.46
LRRTM3Q86VH5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.42■■■□□ 2.46
LRRTM3Q86VH5 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.41■■■□□ 2.46
LRRTM3Q86VH5 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.41■■■□□ 2.46
LRRTM3Q86VH5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.4■■■□□ 2.46
LRRTM3Q86VH5 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
LRRTM3Q86VH5 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
LRRTM3Q86VH5 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
LRRTM3Q86VH5 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.37■■■□□ 2.45
LRRTM3Q86VH5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.35■■■□□ 2.45
LRRTM3Q86VH5 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
LRRTM3Q86VH5 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
LRRTM3Q86VH5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
LRRTM3Q86VH5 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.29■■■□□ 2.44
LRRTM3Q86VH5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
LRRTM3Q86VH5 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
LRRTM3Q86VH5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
LRRTM3Q86VH5 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.22■■■□□ 2.43
LRRTM3Q86VH5 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
LRRTM3Q86VH5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.2■■■□□ 2.43
LRRTM3Q86VH5 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
LRRTM3Q86VH5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.16■■■□□ 2.42
LRRTM3Q86VH5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
LRRTM3Q86VH5 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
LRRTM3Q86VH5 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
LRRTM3Q86VH5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.11■■■□□ 2.41
LRRTM3Q86VH5 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
LRRTM3Q86VH5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.1■■■□□ 2.41
LRRTM3Q86VH5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
LRRTM3Q86VH5 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
LRRTM3Q86VH5 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.09■■■□□ 2.41
LRRTM3Q86VH5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
LRRTM3Q86VH5 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
LRRTM3Q86VH5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
LRRTM3Q86VH5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
LRRTM3Q86VH5 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
LRRTM3Q86VH5 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
LRRTM3Q86VH5 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.01■■■□□ 2.4
LRRTM3Q86VH5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.01■■■□□ 2.39
LRRTM3Q86VH5 RARRES2P7-201ENST00000567349 469 ntBASIC30.01■■■□□ 2.39
LRRTM3Q86VH5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.01■■■□□ 2.39
LRRTM3Q86VH5 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.98■■■□□ 2.39
LRRTM3Q86VH5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.98■■■□□ 2.39
LRRTM3Q86VH5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.97■■■□□ 2.39
LRRTM3Q86VH5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
LRRTM3Q86VH5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
LRRTM3Q86VH5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.93■■■□□ 2.38
LRRTM3Q86VH5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.93■■■□□ 2.38
LRRTM3Q86VH5 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
LRRTM3Q86VH5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
LRRTM3Q86VH5 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.88■■■□□ 2.37
LRRTM3Q86VH5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.86■■■□□ 2.37
LRRTM3Q86VH5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.86■■■□□ 2.37
LRRTM3Q86VH5 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
LRRTM3Q86VH5 SETD8P1-201ENST00000623146 1180 ntBASIC29.82■■■□□ 2.36
LRRTM3Q86VH5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.81■■■□□ 2.36
LRRTM3Q86VH5 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
LRRTM3Q86VH5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
LRRTM3Q86VH5 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
LRRTM3Q86VH5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
LRRTM3Q86VH5 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
LRRTM3Q86VH5 AC097358.2-201ENST00000607541 1159 ntBASIC29.76■■■□□ 2.35
LRRTM3Q86VH5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.76■■■□□ 2.35
LRRTM3Q86VH5 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
LRRTM3Q86VH5 AC136428.2-201ENST00000563187 214 ntBASIC29.75■■■□□ 2.35
LRRTM3Q86VH5 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.72■■■□□ 2.35
LRRTM3Q86VH5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.69■■■□□ 2.34
LRRTM3Q86VH5 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
LRRTM3Q86VH5 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.67■■■□□ 2.34
LRRTM3Q86VH5 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.66■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms