Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
KDM3BQ7LBC6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC37.78■■■■□ 3.64
KDM3BQ7LBC6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC37.72■■■■□ 3.63
KDM3BQ7LBC6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
KDM3BQ7LBC6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC37.67■■■■□ 3.62
KDM3BQ7LBC6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC37.62■■■■□ 3.61
KDM3BQ7LBC6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
KDM3BQ7LBC6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
KDM3BQ7LBC6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC37.55■■■■□ 3.6
KDM3BQ7LBC6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
KDM3BQ7LBC6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
KDM3BQ7LBC6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC37.52■■■■□ 3.6
KDM3BQ7LBC6 AL031258.1-201ENST00000623562 325 ntBASIC37.51■■■■□ 3.6
KDM3BQ7LBC6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
KDM3BQ7LBC6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
KDM3BQ7LBC6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC37.47■■■■□ 3.59
KDM3BQ7LBC6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC37.47■■■■□ 3.59
KDM3BQ7LBC6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
KDM3BQ7LBC6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC37.44■■■■□ 3.58
KDM3BQ7LBC6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC37.44■■■■□ 3.58
KDM3BQ7LBC6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC37.43■■■■□ 3.58
KDM3BQ7LBC6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC37.39■■■■□ 3.58
KDM3BQ7LBC6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC37.38■■■■□ 3.58
KDM3BQ7LBC6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC37.38■■■■□ 3.57
KDM3BQ7LBC6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
KDM3BQ7LBC6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.57
KDM3BQ7LBC6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC37.3■■■■□ 3.56
KDM3BQ7LBC6 AC145285.7-201ENST00000614819 1539 ntBASIC37.29■■■■□ 3.56
KDM3BQ7LBC6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC37.27■■■■□ 3.56
KDM3BQ7LBC6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC37.19■■■■□ 3.54
KDM3BQ7LBC6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
KDM3BQ7LBC6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
KDM3BQ7LBC6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
KDM3BQ7LBC6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC37.16■■■■□ 3.54
KDM3BQ7LBC6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC37.15■■■■□ 3.54
KDM3BQ7LBC6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC37.13■■■■□ 3.53
KDM3BQ7LBC6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC37.11■■■■□ 3.53
KDM3BQ7LBC6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC37.11■■■■□ 3.53
KDM3BQ7LBC6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
KDM3BQ7LBC6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
KDM3BQ7LBC6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC37.1■■■■□ 3.53
KDM3BQ7LBC6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC37.07■■■■□ 3.52
KDM3BQ7LBC6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC37.04■■■■□ 3.52
KDM3BQ7LBC6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
KDM3BQ7LBC6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
KDM3BQ7LBC6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC37.01■■■■□ 3.51
KDM3BQ7LBC6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC36.92■■■■□ 3.5
KDM3BQ7LBC6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC36.91■■■■□ 3.5
KDM3BQ7LBC6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
KDM3BQ7LBC6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC36.89■■■■□ 3.5
KDM3BQ7LBC6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC36.89■■■■□ 3.5
KDM3BQ7LBC6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC36.87■■■■□ 3.49
KDM3BQ7LBC6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC36.86■■■■□ 3.49
KDM3BQ7LBC6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC36.86■■■■□ 3.49
KDM3BQ7LBC6 RARRES2P7-201ENST00000567349 469 ntBASIC36.84■■■■□ 3.49
KDM3BQ7LBC6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
KDM3BQ7LBC6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
KDM3BQ7LBC6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC36.8■■■■□ 3.48
KDM3BQ7LBC6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC36.79■■■■□ 3.48
KDM3BQ7LBC6 MVK-208ENST00000539696 608 ntTSL 5 BASIC36.78■■■■□ 3.48
KDM3BQ7LBC6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
KDM3BQ7LBC6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC36.76■■■■□ 3.48
KDM3BQ7LBC6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC36.74■■■■□ 3.47
KDM3BQ7LBC6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
KDM3BQ7LBC6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC36.69■■■■□ 3.46
KDM3BQ7LBC6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC36.68■■■■□ 3.46
KDM3BQ7LBC6 AC136428.2-201ENST00000563187 214 ntBASIC36.68■■■■□ 3.46
KDM3BQ7LBC6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC36.67■■■■□ 3.46
KDM3BQ7LBC6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC36.66■■■■□ 3.46
KDM3BQ7LBC6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC36.66■■■■□ 3.46
KDM3BQ7LBC6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC36.64■■■■□ 3.46
KDM3BQ7LBC6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
KDM3BQ7LBC6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC36.63■■■■□ 3.46
KDM3BQ7LBC6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC36.61■■■■□ 3.45
KDM3BQ7LBC6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC36.61■■■■□ 3.45
KDM3BQ7LBC6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
KDM3BQ7LBC6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC36.59■■■■□ 3.45
KDM3BQ7LBC6 SETD8P1-201ENST00000623146 1180 ntBASIC36.58■■■■□ 3.45
KDM3BQ7LBC6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC36.55■■■■□ 3.44
KDM3BQ7LBC6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC36.55■■■■□ 3.44
KDM3BQ7LBC6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
KDM3BQ7LBC6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
KDM3BQ7LBC6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC36.54■■■■□ 3.44
KDM3BQ7LBC6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC36.54■■■■□ 3.44
KDM3BQ7LBC6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC36.51■■■■□ 3.44
KDM3BQ7LBC6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC36.5■■■■□ 3.43
KDM3BQ7LBC6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
KDM3BQ7LBC6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
KDM3BQ7LBC6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC36.46■■■■□ 3.43
KDM3BQ7LBC6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
KDM3BQ7LBC6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
KDM3BQ7LBC6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC36.45■■■■□ 3.43
KDM3BQ7LBC6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC36.44■■■■□ 3.42
KDM3BQ7LBC6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC36.4■■■■□ 3.42
KDM3BQ7LBC6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC36.4■■■■□ 3.42
KDM3BQ7LBC6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
KDM3BQ7LBC6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC36.38■■■■□ 3.41
KDM3BQ7LBC6 AC097358.2-201ENST00000607541 1159 ntBASIC36.37■■■■□ 3.41
KDM3BQ7LBC6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
KDM3BQ7LBC6 SUZ12P1-203ENST00000578195 985 ntBASIC36.33■■■■□ 3.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms