Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
PPP4R3CPQ6ZMV5 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
PPP4R3CPQ6ZMV5 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.07■■■□□ 2.72
PPP4R3CPQ6ZMV5 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PPP4R3CPQ6ZMV5 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
PPP4R3CPQ6ZMV5 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
PPP4R3CPQ6ZMV5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
PPP4R3CPQ6ZMV5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
PPP4R3CPQ6ZMV5 AC145285.7-201ENST00000614819 1539 ntBASIC32.01■■■□□ 2.72
PPP4R3CPQ6ZMV5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.98■■■□□ 2.71
PPP4R3CPQ6ZMV5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.98■■■□□ 2.71
PPP4R3CPQ6ZMV5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.97■■■□□ 2.71
PPP4R3CPQ6ZMV5 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
PPP4R3CPQ6ZMV5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.9■■■□□ 2.7
PPP4R3CPQ6ZMV5 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PPP4R3CPQ6ZMV5 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
PPP4R3CPQ6ZMV5 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.83■■■□□ 2.69
PPP4R3CPQ6ZMV5 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
PPP4R3CPQ6ZMV5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.8■■■□□ 2.68
PPP4R3CPQ6ZMV5 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.8■■■□□ 2.68
PPP4R3CPQ6ZMV5 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PPP4R3CPQ6ZMV5 DYNLL1-208ENST00000550178 581 ntBASIC31.8■■■□□ 2.68
PPP4R3CPQ6ZMV5 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PPP4R3CPQ6ZMV5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.76■■■□□ 2.67
PPP4R3CPQ6ZMV5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PPP4R3CPQ6ZMV5 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.75■■■□□ 2.67
PPP4R3CPQ6ZMV5 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.73■■■□□ 2.67
PPP4R3CPQ6ZMV5 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
PPP4R3CPQ6ZMV5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.7■■■□□ 2.67
PPP4R3CPQ6ZMV5 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PPP4R3CPQ6ZMV5 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PPP4R3CPQ6ZMV5 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC31.65■■■□□ 2.66
PPP4R3CPQ6ZMV5 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PPP4R3CPQ6ZMV5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.62■■■□□ 2.65
PPP4R3CPQ6ZMV5 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
PPP4R3CPQ6ZMV5 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
PPP4R3CPQ6ZMV5 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.6■■■□□ 2.65
PPP4R3CPQ6ZMV5 AL031258.1-201ENST00000623562 325 ntBASIC31.6■■■□□ 2.65
PPP4R3CPQ6ZMV5 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
PPP4R3CPQ6ZMV5 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PPP4R3CPQ6ZMV5 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PPP4R3CPQ6ZMV5 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.55■■■□□ 2.64
PPP4R3CPQ6ZMV5 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
PPP4R3CPQ6ZMV5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
PPP4R3CPQ6ZMV5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PPP4R3CPQ6ZMV5 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
PPP4R3CPQ6ZMV5 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PPP4R3CPQ6ZMV5 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
PPP4R3CPQ6ZMV5 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PPP4R3CPQ6ZMV5 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PPP4R3CPQ6ZMV5 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PPP4R3CPQ6ZMV5 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.49■■■□□ 2.63
PPP4R3CPQ6ZMV5 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
PPP4R3CPQ6ZMV5 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PPP4R3CPQ6ZMV5 AC012183.1-201ENST00000625197 499 ntBASIC31.48■■■□□ 2.63
PPP4R3CPQ6ZMV5 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PPP4R3CPQ6ZMV5 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.47■■■□□ 2.63
PPP4R3CPQ6ZMV5 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PPP4R3CPQ6ZMV5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PPP4R3CPQ6ZMV5 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.45■■■□□ 2.62
PPP4R3CPQ6ZMV5 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PPP4R3CPQ6ZMV5 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PPP4R3CPQ6ZMV5 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PPP4R3CPQ6ZMV5 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PPP4R3CPQ6ZMV5 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
PPP4R3CPQ6ZMV5 NIFKP4-201ENST00000567275 1192 ntBASIC31.37■■■□□ 2.61
PPP4R3CPQ6ZMV5 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.33■■■□□ 2.61
PPP4R3CPQ6ZMV5 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
PPP4R3CPQ6ZMV5 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
PPP4R3CPQ6ZMV5 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.3■■■□□ 2.6
PPP4R3CPQ6ZMV5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.3■■■□□ 2.6
PPP4R3CPQ6ZMV5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.28■■■□□ 2.6
PPP4R3CPQ6ZMV5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.28■■■□□ 2.6
PPP4R3CPQ6ZMV5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.26■■■□□ 2.59
PPP4R3CPQ6ZMV5 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.24■■■□□ 2.59
PPP4R3CPQ6ZMV5 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PPP4R3CPQ6ZMV5 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PPP4R3CPQ6ZMV5 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.22■■■□□ 2.59
PPP4R3CPQ6ZMV5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PPP4R3CPQ6ZMV5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PPP4R3CPQ6ZMV5 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PPP4R3CPQ6ZMV5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PPP4R3CPQ6ZMV5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
PPP4R3CPQ6ZMV5 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PPP4R3CPQ6ZMV5 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
PPP4R3CPQ6ZMV5 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.11■■■□□ 2.57
PPP4R3CPQ6ZMV5 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PPP4R3CPQ6ZMV5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.1■■■□□ 2.57
PPP4R3CPQ6ZMV5 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.1■■■□□ 2.57
PPP4R3CPQ6ZMV5 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
PPP4R3CPQ6ZMV5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PPP4R3CPQ6ZMV5 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PPP4R3CPQ6ZMV5 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PPP4R3CPQ6ZMV5 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.04■■■□□ 2.56
PPP4R3CPQ6ZMV5 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
PPP4R3CPQ6ZMV5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.04■■■□□ 2.56
PPP4R3CPQ6ZMV5 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PPP4R3CPQ6ZMV5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
PPP4R3CPQ6ZMV5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PPP4R3CPQ6ZMV5 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms