Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
VARS2Q5ST30 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
VARS2Q5ST30 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
VARS2Q5ST30 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
VARS2Q5ST30 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
VARS2Q5ST30 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
VARS2Q5ST30 AL031258.1-201ENST00000623562 325 ntBASIC31.01■■■□□ 2.55
VARS2Q5ST30 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.96■■■□□ 2.55
VARS2Q5ST30 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.95■■■□□ 2.55
VARS2Q5ST30 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
VARS2Q5ST30 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
VARS2Q5ST30 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
VARS2Q5ST30 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
VARS2Q5ST30 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.82■■■□□ 2.52
VARS2Q5ST30 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
VARS2Q5ST30 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.79■■■□□ 2.52
VARS2Q5ST30 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.79■■■□□ 2.52
VARS2Q5ST30 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.76■■■□□ 2.51
VARS2Q5ST30 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.76■■■□□ 2.51
VARS2Q5ST30 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
VARS2Q5ST30 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
VARS2Q5ST30 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
VARS2Q5ST30 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
VARS2Q5ST30 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
VARS2Q5ST30 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
VARS2Q5ST30 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.6■■■□□ 2.49
VARS2Q5ST30 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.59■■■□□ 2.49
VARS2Q5ST30 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
VARS2Q5ST30 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.58■■■□□ 2.49
VARS2Q5ST30 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.58■■■□□ 2.49
VARS2Q5ST30 AC145285.7-201ENST00000614819 1539 ntBASIC30.57■■■□□ 2.49
VARS2Q5ST30 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.57■■■□□ 2.48
VARS2Q5ST30 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
VARS2Q5ST30 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.56■■■□□ 2.48
VARS2Q5ST30 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
VARS2Q5ST30 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.52■■■□□ 2.48
VARS2Q5ST30 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
VARS2Q5ST30 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
VARS2Q5ST30 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
VARS2Q5ST30 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
VARS2Q5ST30 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
VARS2Q5ST30 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
VARS2Q5ST30 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.46■■■□□ 2.47
VARS2Q5ST30 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
VARS2Q5ST30 RARRES2P7-201ENST00000567349 469 ntBASIC30.41■■■□□ 2.46
VARS2Q5ST30 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
VARS2Q5ST30 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
VARS2Q5ST30 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
VARS2Q5ST30 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
VARS2Q5ST30 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
VARS2Q5ST30 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
VARS2Q5ST30 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.33■■■□□ 2.45
VARS2Q5ST30 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
VARS2Q5ST30 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.31■■■□□ 2.44
VARS2Q5ST30 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.3■■■□□ 2.44
VARS2Q5ST30 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
VARS2Q5ST30 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.29■■■□□ 2.44
VARS2Q5ST30 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.28■■■□□ 2.44
VARS2Q5ST30 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.26■■■□□ 2.43
VARS2Q5ST30 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.26■■■□□ 2.43
VARS2Q5ST30 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.26■■■□□ 2.43
VARS2Q5ST30 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.26■■■□□ 2.43
VARS2Q5ST30 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.25■■■□□ 2.43
VARS2Q5ST30 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
VARS2Q5ST30 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
VARS2Q5ST30 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
VARS2Q5ST30 SETD8P1-201ENST00000623146 1180 ntBASIC30.17■■■□□ 2.42
VARS2Q5ST30 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.17■■■□□ 2.42
VARS2Q5ST30 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
VARS2Q5ST30 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.16■■■□□ 2.42
VARS2Q5ST30 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.16■■■□□ 2.42
VARS2Q5ST30 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
VARS2Q5ST30 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
VARS2Q5ST30 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.13■■■□□ 2.41
VARS2Q5ST30 AC097358.2-201ENST00000607541 1159 ntBASIC30.12■■■□□ 2.41
VARS2Q5ST30 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
VARS2Q5ST30 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
VARS2Q5ST30 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.09■■■□□ 2.41
VARS2Q5ST30 AC136428.2-201ENST00000563187 214 ntBASIC30.08■■■□□ 2.41
VARS2Q5ST30 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
VARS2Q5ST30 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
VARS2Q5ST30 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
VARS2Q5ST30 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
VARS2Q5ST30 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
VARS2Q5ST30 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
VARS2Q5ST30 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
VARS2Q5ST30 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
VARS2Q5ST30 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
VARS2Q5ST30 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
VARS2Q5ST30 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.98■■■□□ 2.39
VARS2Q5ST30 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
VARS2Q5ST30 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.92■■■□□ 2.38
VARS2Q5ST30 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.92■■■□□ 2.38
VARS2Q5ST30 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.92■■■□□ 2.38
VARS2Q5ST30 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.92■■■□□ 2.38
VARS2Q5ST30 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.91■■■□□ 2.38
VARS2Q5ST30 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.91■■■□□ 2.38
VARS2Q5ST30 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
VARS2Q5ST30 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.87■■■□□ 2.37
VARS2Q5ST30 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms