Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
TDP2O95551 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
TDP2O95551 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.87■■■□□ 2.85
TDP2O95551 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
TDP2O95551 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.83■■■□□ 2.85
TDP2O95551 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.82■■■□□ 2.84
TDP2O95551 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.77■■■□□ 2.84
TDP2O95551 AP002365.1-201ENST00000603448 772 ntBASIC32.71■■■□□ 2.83
TDP2O95551 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
TDP2O95551 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.68■■■□□ 2.82
TDP2O95551 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.65■■■□□ 2.82
TDP2O95551 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.63■■■□□ 2.81
TDP2O95551 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.63■■■□□ 2.81
TDP2O95551 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
TDP2O95551 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
TDP2O95551 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
TDP2O95551 DYNLL1-208ENST00000550178 581 ntBASIC32.61■■■□□ 2.81
TDP2O95551 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
TDP2O95551 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
TDP2O95551 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.59■■■□□ 2.81
TDP2O95551 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.57■■■□□ 2.8
TDP2O95551 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
TDP2O95551 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.56■■■□□ 2.8
TDP2O95551 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
TDP2O95551 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.55■■■□□ 2.8
TDP2O95551 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.55■■■□□ 2.8
TDP2O95551 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.54■■■□□ 2.8
TDP2O95551 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
TDP2O95551 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
TDP2O95551 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
TDP2O95551 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
TDP2O95551 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.5■■■□□ 2.79
TDP2O95551 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.48■■■□□ 2.79
TDP2O95551 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.48■■■□□ 2.79
TDP2O95551 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
TDP2O95551 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
TDP2O95551 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.42■■■□□ 2.78
TDP2O95551 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
TDP2O95551 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
TDP2O95551 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.38■■■□□ 2.77
TDP2O95551 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
TDP2O95551 AL031258.1-201ENST00000623562 325 ntBASIC32.38■■■□□ 2.77
TDP2O95551 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
TDP2O95551 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.33■■■□□ 2.77
TDP2O95551 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.77
TDP2O95551 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.31■■■□□ 2.76
TDP2O95551 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.3■■■□□ 2.76
TDP2O95551 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
TDP2O95551 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
TDP2O95551 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
TDP2O95551 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
TDP2O95551 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
TDP2O95551 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.18■■■□□ 2.74
TDP2O95551 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
TDP2O95551 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.17■■■□□ 2.74
TDP2O95551 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
TDP2O95551 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.16■■■□□ 2.74
TDP2O95551 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
TDP2O95551 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
TDP2O95551 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.11■■■□□ 2.73
TDP2O95551 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.11■■■□□ 2.73
TDP2O95551 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
TDP2O95551 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
TDP2O95551 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.06■■■□□ 2.72
TDP2O95551 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
TDP2O95551 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.04■■■□□ 2.72
TDP2O95551 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.03■■■□□ 2.72
TDP2O95551 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
TDP2O95551 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.02■■■□□ 2.72
TDP2O95551 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
TDP2O95551 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.01■■■□□ 2.71
TDP2O95551 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.01■■■□□ 2.71
TDP2O95551 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32■■■□□ 2.71
TDP2O95551 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
TDP2O95551 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
TDP2O95551 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TDP2O95551 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TDP2O95551 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.94■■■□□ 2.7
TDP2O95551 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
TDP2O95551 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
TDP2O95551 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.92■■■□□ 2.7
TDP2O95551 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TDP2O95551 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
TDP2O95551 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TDP2O95551 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.84■■■□□ 2.69
TDP2O95551 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TDP2O95551 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.82■■■□□ 2.68
TDP2O95551 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
TDP2O95551 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
TDP2O95551 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TDP2O95551 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
TDP2O95551 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
TDP2O95551 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.74■■■□□ 2.67
TDP2O95551 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
TDP2O95551 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.71■■■□□ 2.67
TDP2O95551 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.69■■■□□ 2.66
TDP2O95551 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.69■■■□□ 2.66
TDP2O95551 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TDP2O95551 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TDP2O95551 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.67■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms