Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
SPDYE4A6NLX3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
SPDYE4A6NLX3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
SPDYE4A6NLX3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.84■■■□□ 2.69
SPDYE4A6NLX3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SPDYE4A6NLX3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SPDYE4A6NLX3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SPDYE4A6NLX3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.75■■■□□ 2.67
SPDYE4A6NLX3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.74■■■□□ 2.67
SPDYE4A6NLX3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.73■■■□□ 2.67
SPDYE4A6NLX3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.73■■■□□ 2.67
SPDYE4A6NLX3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SPDYE4A6NLX3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.71■■■□□ 2.67
SPDYE4A6NLX3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
SPDYE4A6NLX3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
SPDYE4A6NLX3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SPDYE4A6NLX3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SPDYE4A6NLX3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.65■■■□□ 2.66
SPDYE4A6NLX3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
SPDYE4A6NLX3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SPDYE4A6NLX3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.62■■■□□ 2.65
SPDYE4A6NLX3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
SPDYE4A6NLX3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
SPDYE4A6NLX3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.54■■■□□ 2.64
SPDYE4A6NLX3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
SPDYE4A6NLX3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.5■■■□□ 2.63
SPDYE4A6NLX3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
SPDYE4A6NLX3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
SPDYE4A6NLX3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.48■■■□□ 2.63
SPDYE4A6NLX3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
SPDYE4A6NLX3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SPDYE4A6NLX3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SPDYE4A6NLX3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SPDYE4A6NLX3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.45■■■□□ 2.63
SPDYE4A6NLX3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.45■■■□□ 2.62
SPDYE4A6NLX3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SPDYE4A6NLX3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.43■■■□□ 2.62
SPDYE4A6NLX3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.41■■■□□ 2.62
SPDYE4A6NLX3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
SPDYE4A6NLX3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
SPDYE4A6NLX3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
SPDYE4A6NLX3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SPDYE4A6NLX3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.35■■■□□ 2.61
SPDYE4A6NLX3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SPDYE4A6NLX3 DYNLL1-208ENST00000550178 581 ntBASIC31.32■■■□□ 2.6
SPDYE4A6NLX3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
SPDYE4A6NLX3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.28■■■□□ 2.6
SPDYE4A6NLX3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.27■■■□□ 2.6
SPDYE4A6NLX3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SPDYE4A6NLX3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SPDYE4A6NLX3 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.21■■■□□ 2.59
SPDYE4A6NLX3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.2■■■□□ 2.59
SPDYE4A6NLX3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SPDYE4A6NLX3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.18■■■□□ 2.58
SPDYE4A6NLX3 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SPDYE4A6NLX3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.14■■■□□ 2.58
SPDYE4A6NLX3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SPDYE4A6NLX3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.12■■■□□ 2.57
SPDYE4A6NLX3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SPDYE4A6NLX3 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.06■■■□□ 2.56
SPDYE4A6NLX3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
SPDYE4A6NLX3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SPDYE4A6NLX3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SPDYE4A6NLX3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
SPDYE4A6NLX3 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
SPDYE4A6NLX3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.56
SPDYE4A6NLX3 AL031258.1-201ENST00000623562 325 ntBASIC31.01■■■□□ 2.55
SPDYE4A6NLX3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31■■■□□ 2.55
SPDYE4A6NLX3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SPDYE4A6NLX3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SPDYE4A6NLX3 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.98■■■□□ 2.55
SPDYE4A6NLX3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.98■■■□□ 2.55
SPDYE4A6NLX3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.98■■■□□ 2.55
SPDYE4A6NLX3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SPDYE4A6NLX3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SPDYE4A6NLX3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
SPDYE4A6NLX3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.93■■■□□ 2.54
SPDYE4A6NLX3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
SPDYE4A6NLX3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.91■■■□□ 2.54
SPDYE4A6NLX3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
SPDYE4A6NLX3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.9■■■□□ 2.54
SPDYE4A6NLX3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SPDYE4A6NLX3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SPDYE4A6NLX3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SPDYE4A6NLX3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.87■■■□□ 2.53
SPDYE4A6NLX3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.86■■■□□ 2.53
SPDYE4A6NLX3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SPDYE4A6NLX3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
SPDYE4A6NLX3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SPDYE4A6NLX3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SPDYE4A6NLX3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
SPDYE4A6NLX3 RARRES2P7-201ENST00000567349 469 ntBASIC30.79■■■□□ 2.52
SPDYE4A6NLX3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SPDYE4A6NLX3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
SPDYE4A6NLX3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.78■■■□□ 2.52
SPDYE4A6NLX3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
SPDYE4A6NLX3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SPDYE4A6NLX3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SPDYE4A6NLX3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.73■■■□□ 2.51
SPDYE4A6NLX3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms