Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRGV4A0A0C4DH28 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.51■□□□□ 0.87
TRGV4A0A0C4DH28 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV4A0A0C4DH28 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRGV4A0A0C4DH28 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRGV4A0A0C4DH28 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV4A0A0C4DH28 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.45■□□□□ 0.86
TRGV4A0A0C4DH28 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.43■□□□□ 0.86
TRGV4A0A0C4DH28 AC006077.2-201ENST00000623591 457 ntBASIC20.43■□□□□ 0.86
TRGV4A0A0C4DH28 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRGV4A0A0C4DH28 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV4A0A0C4DH28 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TRGV4A0A0C4DH28 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRGV4A0A0C4DH28 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRGV4A0A0C4DH28 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.35■□□□□ 0.85
TRGV4A0A0C4DH28 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRGV4A0A0C4DH28 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRGV4A0A0C4DH28 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRGV4A0A0C4DH28 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRGV4A0A0C4DH28 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRGV4A0A0C4DH28 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRGV4A0A0C4DH28 ZNRF2P1-201ENST00000441407 443 ntBASIC20.29■□□□□ 0.84
TRGV4A0A0C4DH28 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRGV4A0A0C4DH28 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.25■□□□□ 0.83
TRGV4A0A0C4DH28 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRGV4A0A0C4DH28 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
TRGV4A0A0C4DH28 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRGV4A0A0C4DH28 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRGV4A0A0C4DH28 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRGV4A0A0C4DH28 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRGV4A0A0C4DH28 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRGV4A0A0C4DH28 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.19■□□□□ 0.82
TRGV4A0A0C4DH28 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TRGV4A0A0C4DH28 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRGV4A0A0C4DH28 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRGV4A0A0C4DH28 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRGV4A0A0C4DH28 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRGV4A0A0C4DH28 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRGV4A0A0C4DH28 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRGV4A0A0C4DH28 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TRGV4A0A0C4DH28 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRGV4A0A0C4DH28 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRGV4A0A0C4DH28 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRGV4A0A0C4DH28 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRGV4A0A0C4DH28 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRGV4A0A0C4DH28 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.1■□□□□ 0.81
TRGV4A0A0C4DH28 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.1■□□□□ 0.81
TRGV4A0A0C4DH28 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRGV4A0A0C4DH28 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.09■□□□□ 0.81
TRGV4A0A0C4DH28 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRGV4A0A0C4DH28 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRGV4A0A0C4DH28 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRGV4A0A0C4DH28 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.06■□□□□ 0.8
TRGV4A0A0C4DH28 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRGV4A0A0C4DH28 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.05■□□□□ 0.8
TRGV4A0A0C4DH28 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.04■□□□□ 0.8
TRGV4A0A0C4DH28 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRGV4A0A0C4DH28 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRGV4A0A0C4DH28 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRGV4A0A0C4DH28 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRGV4A0A0C4DH28 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRGV4A0A0C4DH28 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRGV4A0A0C4DH28 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.01■□□□□ 0.79
TRGV4A0A0C4DH28 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRGV4A0A0C4DH28 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRGV4A0A0C4DH28 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRGV4A0A0C4DH28 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRGV4A0A0C4DH28 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRGV4A0A0C4DH28 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRGV4A0A0C4DH28 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRGV4A0A0C4DH28 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.94■□□□□ 0.78
TRGV4A0A0C4DH28 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRGV4A0A0C4DH28 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.9■□□□□ 0.78
TRGV4A0A0C4DH28 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRGV4A0A0C4DH28 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRGV4A0A0C4DH28 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.89■□□□□ 0.77
TRGV4A0A0C4DH28 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRGV4A0A0C4DH28 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRGV4A0A0C4DH28 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.87■□□□□ 0.77
TRGV4A0A0C4DH28 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRGV4A0A0C4DH28 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.86■□□□□ 0.77
TRGV4A0A0C4DH28 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRGV4A0A0C4DH28 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRGV4A0A0C4DH28 DYNLL1-208ENST00000550178 581 ntBASIC19.86■□□□□ 0.77
TRGV4A0A0C4DH28 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRGV4A0A0C4DH28 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRGV4A0A0C4DH28 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.85■□□□□ 0.77
TRGV4A0A0C4DH28 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
TRGV4A0A0C4DH28 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TRGV4A0A0C4DH28 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRGV4A0A0C4DH28 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRGV4A0A0C4DH28 AP002365.1-201ENST00000603448 772 ntBASIC19.84■□□□□ 0.77
TRGV4A0A0C4DH28 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.83■□□□□ 0.77
TRGV4A0A0C4DH28 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.83■□□□□ 0.77
TRGV4A0A0C4DH28 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRGV4A0A0C4DH28 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRGV4A0A0C4DH28 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRGV4A0A0C4DH28 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRGV4A0A0C4DH28 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRGV4A0A0C4DH28 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms