Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV16A0A0A6YYK6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV16A0A0A6YYK6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV16A0A0A6YYK6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
TRAV16A0A0A6YYK6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TRAV16A0A0A6YYK6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV16A0A0A6YYK6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV16A0A0A6YYK6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV16A0A0A6YYK6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV16A0A0A6YYK6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAV16A0A0A6YYK6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV16A0A0A6YYK6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV16A0A0A6YYK6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV16A0A0A6YYK6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV16A0A0A6YYK6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV16A0A0A6YYK6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRAV16A0A0A6YYK6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV16A0A0A6YYK6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.73■□□□□ 0.75
TRAV16A0A0A6YYK6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV16A0A0A6YYK6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV16A0A0A6YYK6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV16A0A0A6YYK6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV16A0A0A6YYK6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV16A0A0A6YYK6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV16A0A0A6YYK6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRAV16A0A0A6YYK6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV16A0A0A6YYK6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.65■□□□□ 0.74
TRAV16A0A0A6YYK6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV16A0A0A6YYK6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV16A0A0A6YYK6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV16A0A0A6YYK6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV16A0A0A6YYK6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRAV16A0A0A6YYK6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV16A0A0A6YYK6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
TRAV16A0A0A6YYK6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAV16A0A0A6YYK6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV16A0A0A6YYK6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV16A0A0A6YYK6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV16A0A0A6YYK6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV16A0A0A6YYK6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
TRAV16A0A0A6YYK6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TRAV16A0A0A6YYK6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV16A0A0A6YYK6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV16A0A0A6YYK6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV16A0A0A6YYK6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRAV16A0A0A6YYK6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV16A0A0A6YYK6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV16A0A0A6YYK6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRAV16A0A0A6YYK6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV16A0A0A6YYK6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV16A0A0A6YYK6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV16A0A0A6YYK6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV16A0A0A6YYK6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRAV16A0A0A6YYK6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRAV16A0A0A6YYK6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV16A0A0A6YYK6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV16A0A0A6YYK6 AL161658.1-201ENST00000623641 1967 ntBASIC19.46■□□□□ 0.71
TRAV16A0A0A6YYK6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV16A0A0A6YYK6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV16A0A0A6YYK6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV16A0A0A6YYK6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRAV16A0A0A6YYK6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV16A0A0A6YYK6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV16A0A0A6YYK6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV16A0A0A6YYK6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV16A0A0A6YYK6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV16A0A0A6YYK6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV16A0A0A6YYK6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV16A0A0A6YYK6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV16A0A0A6YYK6 AC015813.7-201ENST00000623294 581 ntBASIC19.38■□□□□ 0.69
TRAV16A0A0A6YYK6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV16A0A0A6YYK6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV16A0A0A6YYK6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV16A0A0A6YYK6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV16A0A0A6YYK6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRAV16A0A0A6YYK6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV16A0A0A6YYK6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV16A0A0A6YYK6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRAV16A0A0A6YYK6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV16A0A0A6YYK6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV16A0A0A6YYK6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV16A0A0A6YYK6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV16A0A0A6YYK6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV16A0A0A6YYK6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV16A0A0A6YYK6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV16A0A0A6YYK6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV16A0A0A6YYK6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRAV16A0A0A6YYK6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV16A0A0A6YYK6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.21■□□□□ 0.67
TRAV16A0A0A6YYK6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TRAV16A0A0A6YYK6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRAV16A0A0A6YYK6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV16A0A0A6YYK6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV16A0A0A6YYK6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV16A0A0A6YYK6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRAV16A0A0A6YYK6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV16A0A0A6YYK6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV16A0A0A6YYK6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAV16A0A0A6YYK6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV16A0A0A6YYK6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms