Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV26-1A0A087WT03 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV26-1A0A087WT03 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV26-1A0A087WT03 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TRAV26-1A0A087WT03 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV26-1A0A087WT03 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV26-1A0A087WT03 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAV26-1A0A087WT03 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV26-1A0A087WT03 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV26-1A0A087WT03 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.35■□□□□ 0.85
TRAV26-1A0A087WT03 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV26-1A0A087WT03 AC139426.1-201ENST00000568218 2529 ntBASIC20.34■□□□□ 0.85
TRAV26-1A0A087WT03 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV26-1A0A087WT03 AC145285.7-201ENST00000614819 1539 ntBASIC20.32■□□□□ 0.84
TRAV26-1A0A087WT03 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRAV26-1A0A087WT03 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.28■□□□□ 0.84
TRAV26-1A0A087WT03 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV26-1A0A087WT03 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV26-1A0A087WT03 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRAV26-1A0A087WT03 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV26-1A0A087WT03 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV26-1A0A087WT03 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV26-1A0A087WT03 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TRAV26-1A0A087WT03 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.21■□□□□ 0.83
TRAV26-1A0A087WT03 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV26-1A0A087WT03 AP002365.1-201ENST00000603448 772 ntBASIC20.19■□□□□ 0.82
TRAV26-1A0A087WT03 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV26-1A0A087WT03 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAV26-1A0A087WT03 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV26-1A0A087WT03 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TRAV26-1A0A087WT03 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TRAV26-1A0A087WT03 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV26-1A0A087WT03 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV26-1A0A087WT03 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV26-1A0A087WT03 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TRAV26-1A0A087WT03 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV26-1A0A087WT03 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.12■□□□□ 0.81
TRAV26-1A0A087WT03 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAV26-1A0A087WT03 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV26-1A0A087WT03 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV26-1A0A087WT03 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV26-1A0A087WT03 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV26-1A0A087WT03 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV26-1A0A087WT03 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV26-1A0A087WT03 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
TRAV26-1A0A087WT03 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV26-1A0A087WT03 DYNLL1-208ENST00000550178 581 ntBASIC20.09■□□□□ 0.81
TRAV26-1A0A087WT03 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV26-1A0A087WT03 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV26-1A0A087WT03 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAV26-1A0A087WT03 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAV26-1A0A087WT03 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV26-1A0A087WT03 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TRAV26-1A0A087WT03 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV26-1A0A087WT03 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV26-1A0A087WT03 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAV26-1A0A087WT03 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV26-1A0A087WT03 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAV26-1A0A087WT03 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV26-1A0A087WT03 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAV26-1A0A087WT03 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV26-1A0A087WT03 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20■□□□□ 0.79
TRAV26-1A0A087WT03 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV26-1A0A087WT03 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRAV26-1A0A087WT03 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.97■□□□□ 0.79
TRAV26-1A0A087WT03 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV26-1A0A087WT03 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV26-1A0A087WT03 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV26-1A0A087WT03 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV26-1A0A087WT03 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAV26-1A0A087WT03 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAV26-1A0A087WT03 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAV26-1A0A087WT03 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV26-1A0A087WT03 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV26-1A0A087WT03 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TRAV26-1A0A087WT03 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TRAV26-1A0A087WT03 AL031258.1-201ENST00000623562 325 ntBASIC19.92■□□□□ 0.78
TRAV26-1A0A087WT03 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV26-1A0A087WT03 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV26-1A0A087WT03 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV26-1A0A087WT03 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV26-1A0A087WT03 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV26-1A0A087WT03 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.87■□□□□ 0.77
TRAV26-1A0A087WT03 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV26-1A0A087WT03 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV26-1A0A087WT03 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV26-1A0A087WT03 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TRAV26-1A0A087WT03 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV26-1A0A087WT03 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV26-1A0A087WT03 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.76
TRAV26-1A0A087WT03 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRAV26-1A0A087WT03 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAV26-1A0A087WT03 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV26-1A0A087WT03 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV26-1A0A087WT03 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV26-1A0A087WT03 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.79■□□□□ 0.76
TRAV26-1A0A087WT03 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV26-1A0A087WT03 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TRAV26-1A0A087WT03 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV26-1A0A087WT03 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms