Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCSMST1Q4G0I0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCSMST1Q4G0I0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCSMST1Q4G0I0 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.03■■□□□ 1.28
CCSMST1Q4G0I0 AC010980.1-201ENST00000587192 1142 ntBASIC23.03■■□□□ 1.28
CCSMST1Q4G0I0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.03■■□□□ 1.28
CCSMST1Q4G0I0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.03■■□□□ 1.28
CCSMST1Q4G0I0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.03■■□□□ 1.28
CCSMST1Q4G0I0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCSMST1Q4G0I0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCSMST1Q4G0I0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.03■■□□□ 1.28
CCSMST1Q4G0I0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCSMST1Q4G0I0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.02■■□□□ 1.28
CCSMST1Q4G0I0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CCSMST1Q4G0I0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCSMST1Q4G0I0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCSMST1Q4G0I0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCSMST1Q4G0I0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CCSMST1Q4G0I0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCSMST1Q4G0I0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCSMST1Q4G0I0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.01■■□□□ 1.27
CCSMST1Q4G0I0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCSMST1Q4G0I0 FOXO3B-201ENST00000395675 1928 ntBASIC23.01■■□□□ 1.27
CCSMST1Q4G0I0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CCSMST1Q4G0I0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
CCSMST1Q4G0I0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCSMST1Q4G0I0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.01■■□□□ 1.27
CCSMST1Q4G0I0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
CCSMST1Q4G0I0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCSMST1Q4G0I0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCSMST1Q4G0I0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23■■□□□ 1.27
CCSMST1Q4G0I0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCSMST1Q4G0I0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
CCSMST1Q4G0I0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCSMST1Q4G0I0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCSMST1Q4G0I0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CCSMST1Q4G0I0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCSMST1Q4G0I0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CCSMST1Q4G0I0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCSMST1Q4G0I0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCSMST1Q4G0I0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCSMST1Q4G0I0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCSMST1Q4G0I0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CCSMST1Q4G0I0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCSMST1Q4G0I0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCSMST1Q4G0I0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.98■■□□□ 1.27
CCSMST1Q4G0I0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCSMST1Q4G0I0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.97■■□□□ 1.27
CCSMST1Q4G0I0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CCSMST1Q4G0I0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCSMST1Q4G0I0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CCSMST1Q4G0I0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CCSMST1Q4G0I0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCSMST1Q4G0I0 AC138932.3-201ENST00000567634 1902 ntBASIC22.96■■□□□ 1.27
CCSMST1Q4G0I0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.96■■□□□ 1.27
CCSMST1Q4G0I0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCSMST1Q4G0I0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCSMST1Q4G0I0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCSMST1Q4G0I0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCSMST1Q4G0I0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCSMST1Q4G0I0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCSMST1Q4G0I0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCSMST1Q4G0I0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCSMST1Q4G0I0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCSMST1Q4G0I0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCSMST1Q4G0I0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.95■■□□□ 1.26
CCSMST1Q4G0I0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCSMST1Q4G0I0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.95■■□□□ 1.26
CCSMST1Q4G0I0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.95■■□□□ 1.26
CCSMST1Q4G0I0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.95■■□□□ 1.26
CCSMST1Q4G0I0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CCSMST1Q4G0I0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.95■■□□□ 1.26
CCSMST1Q4G0I0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCSMST1Q4G0I0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCSMST1Q4G0I0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
CCSMST1Q4G0I0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCSMST1Q4G0I0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCSMST1Q4G0I0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCSMST1Q4G0I0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCSMST1Q4G0I0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
CCSMST1Q4G0I0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCSMST1Q4G0I0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.93■■□□□ 1.26
CCSMST1Q4G0I0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCSMST1Q4G0I0 AC074183.2-201ENST00000623112 922 ntBASIC22.93■■□□□ 1.26
CCSMST1Q4G0I0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
CCSMST1Q4G0I0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCSMST1Q4G0I0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCSMST1Q4G0I0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.92■■□□□ 1.26
CCSMST1Q4G0I0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCSMST1Q4G0I0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
CCSMST1Q4G0I0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
CCSMST1Q4G0I0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCSMST1Q4G0I0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCSMST1Q4G0I0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CCSMST1Q4G0I0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
CCSMST1Q4G0I0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.92■■□□□ 1.26
CCSMST1Q4G0I0 AC019171.1-201ENST00000601251 1056 ntBASIC22.92■■□□□ 1.26
CCSMST1Q4G0I0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCSMST1Q4G0I0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CCSMST1Q4G0I0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms