RNA–Protein interactions for RNA: ENST00000372634.1

BEX3-202, Transcript of brain expressed X-linked 3, humanhuman

TSL 2 BASIC

Gene BEX3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEX3-202ENST00000372634 NISCHQ9Y2I1 1504 aa58.9■■■■■ 7.02
BEX3-202ENST00000372634 CCDC180Q9P1Z9 1646 aa52.61■■■■■ 6.01
BEX3-202ENST00000372634 ABCC9O60706 1549 aa51.99■■■■■ 5.91
BEX3-202ENST00000372634 RB1CC1Q8TDY2 1594 aa49.73■■■■■ 5.55
BEX3-202ENST00000372634 NACADO15069 1562 aa49.53■■■■■ 5.52
BEX3-202ENST00000372634 DCAF8L2P0C7V8 631 aa49.41■■■■■ 5.5
BEX3-202ENST00000372634 MYO15BQ96JP2 1530 aa49■■■■■ 5.43
BEX3-202ENST00000372634 ZCCHC6Q5VYS8 1495 aaKnown RBP48.98■■■■■ 5.43
BEX3-202ENST00000372634 UNC13AQ9UPW8 1703 aa48.76■■■■■ 5.4
BEX3-202ENST00000372634 DCAF1Q9Y4B6 1507 aa48.64■■■■■ 5.38
BEX3-202ENST00000372634 PABPN1Q86U42 306 aaKnown RBP eCLIP48.48■■■■■ 5.35
BEX3-202ENST00000372634 BICRAQ9NZM4 1560 aa48.32■■■■■ 5.33
BEX3-202ENST00000372634 DNAJC5BQ9UF47 199 aa48.15■■■■■ 5.3
BEX3-202ENST00000372634 SCRIBQ14160 1630 aa48.05■■■■■ 5.28
BEX3-202ENST00000372634 SHROOM4Q9ULL8 1493 aa47.6■■■■■ 5.21
BEX3-202ENST00000372634 EIF4G1Q04637 1599 aaKnown RBP47.05■■■■■ 5.12
BEX3-202ENST00000372634 CC2D2AQ9P2K1 1620 aa47.01■■■■■ 5.12
BEX3-202ENST00000372634 CECR2Q9BXF3 1484 aa46.72■■■■■ 5.07
BEX3-202ENST00000372634 SMARCA4P51532 1647 aa45.87■■■■■ 4.93
BEX3-202ENST00000372634 NCAPD3P42695 1498 aa45.68■■■■■ 4.9
BEX3-202ENST00000372634 ATAD2BQ9ULI0 1458 aa45.68■■■■■ 4.9
BEX3-202ENST00000372634 BAZ1AQ9NRL2 1556 aaPredicted RBP45.67■■■■■ 4.9
BEX3-202ENST00000372634 SMARCA2P51531 1590 aa45.58■■■■■ 4.89
BEX3-202ENST00000372634 HMGXB3Q12766 1538 aa45.46■■■■■ 4.87
BEX3-202ENST00000372634 MROH2BQ7Z745 1585 aa45.45■■■■■ 4.87
BEX3-202ENST00000372634 PEG3Q9GZU2 1588 aa45.36■■■■■ 4.85
BEX3-202ENST00000372634 BAZ1BQ9UIG0 1483 aaKnown RBP45.29■■■■■ 4.84
BEX3-202ENST00000372634 WIZO95785 1651 aa44.98■■■■■ 4.79
BEX3-202ENST00000372634 NESP48681 1621 aa44.88■■■■■ 4.78
BEX3-202ENST00000372634 ERCC6Q03468 1493 aa44.8■■■■■ 4.76
BEX3-202ENST00000372634 RSF1Q96T23 1441 aaPredicted RBP44.69■■■■■ 4.75
BEX3-202ENST00000372634 LAMC3Q9Y6N6 1575 aa44.6■■■■■ 4.73
BEX3-202ENST00000372634 CUX2O14529 1486 aa44.46■■■■■ 4.71
BEX3-202ENST00000372634 TOP2AP11388 1531 aaKnown RBP44.4■■■■■ 4.7
BEX3-202ENST00000372634 KIF21AQ7Z4S6 1674 aa44.37■■■■■ 4.69
BEX3-202ENST00000372634 CADPSQ9ULU8 1353 aa44.32■■■■■ 4.69
BEX3-202ENST00000372634 THOC2Q8NI27 1593 aaKnown RBP44.31■■■■■ 4.68
BEX3-202ENST00000372634 PDS5BQ9NTI5 1447 aa44.26■■■■■ 4.68
BEX3-202ENST00000372634 CFTRP13569 1480 aa43.98■■■■■ 4.63
BEX3-202ENST00000372634 MRC2Q9UBG0 1479 aa43.9■■■■■ 4.62
BEX3-202ENST00000372634 FANCD2Q9BXW9 1451 aa43.88■■■■■ 4.61
BEX3-202ENST00000372634 CCDC88BA6NC98 1476 aa43.87■■■■■ 4.61
BEX3-202ENST00000372634 CEP164Q9UPV0 1460 aa43.86■■■■■ 4.61
BEX3-202ENST00000372634 WDR62O43379 1518 aa43.79■■■■■ 4.6
BEX3-202ENST00000372634 PRDM2Q13029 1718 aa43.73■■■■■ 4.59
BEX3-202ENST00000372634 DNAJC5Q9H3Z4 198 aa43.65■■■■■ 4.58
BEX3-202ENST00000372634 URB2Q14146 1524 aaKnown RBP43.52■■■■■ 4.56
BEX3-202ENST00000372634 SUPT5HO00267 1087 aaKnown RBP43.21■■■■■ 4.51
BEX3-202ENST00000372634 TOPBP1Q92547 1522 aa43.14■■■■■ 4.5
BEX3-202ENST00000372634 DNMBPQ6XZF7 1577 aa43.04■■■■■ 4.48
BEX3-202ENST00000372634 ABCC8Q09428 1581 aa42.99■■■■■ 4.47
BEX3-202ENST00000372634 IFT140Q96RY7 1462 aa42.94■■■■■ 4.46
BEX3-202ENST00000372634 ZNF608Q9ULD9 1512 aaPredicted RBP42.87■■■■■ 4.45
BEX3-202ENST00000372634 POLA1P09884 1462 aaPredicted RBP42.74■■■■■ 4.43
BEX3-202ENST00000372634 TARBP1Q13395 1621 aaKnown RBP42.73■■■■■ 4.43
BEX3-202ENST00000372634 EIF4G3O43432 1585 aaKnown RBP42.7■■■■■ 4.43
BEX3-202ENST00000372634 CUX1P39880 1505 aa42.66■■■■■ 4.42
BEX3-202ENST00000372634 RAD54L2Q9Y4B4 1467 aa42.6■■■■■ 4.41
BEX3-202ENST00000372634 FGD5Q6ZNL6 1462 aa42.58■■■■■ 4.41
BEX3-202ENST00000372634 AQRO60306 1485 aaKnown RBP eCLIP42.54■■■■■ 4.4
BEX3-202ENST00000372634 SOGA1O94964 1423 aa42.5■■■■■ 4.39
BEX3-202ENST00000372634 OSCARQ8IYS5 282 aa42.48■■■■■ 4.39
BEX3-202ENST00000372634 TDRD9Q8NDG6 1382 aaKnown RBP42.37■■■■■ 4.37
BEX3-202ENST00000372634 WDR97A6NE52 1622 aa42.31■■■■■ 4.36
BEX3-202ENST00000372634 CHD1O14646 1710 aa42.31■■■■■ 4.36
BEX3-202ENST00000372634 SYNJ1O43426 1573 aa42.17■■■■■ 4.34
BEX3-202ENST00000372634 BIVM-ERCC5R4GMW8 1640 aa42.17■■■■■ 4.34
BEX3-202ENST00000372634 SNAPC4Q5SXM2 1469 aa42.15■■■■■ 4.34
BEX3-202ENST00000372634 WRNQ14191 1432 aaPredicted RBP eCLIP42.14■■■■■ 4.34
BEX3-202ENST00000372634 TOP2BQ02880 1626 aa42.14■■■■■ 4.34
BEX3-202ENST00000372634 FBLN2P98095 1184 aa42.1■■■■■ 4.33
BEX3-202ENST00000372634 TRIM41Q8WV44 630 aa42.1■■■■■ 4.33
BEX3-202ENST00000372634 ABCA10Q8WWZ4 1543 aa42.1■■■■■ 4.33
BEX3-202ENST00000372634 PBRM1Q86U86 1689 aa42.09■■■■■ 4.33
BEX3-202ENST00000372634 GRIN2BQ13224 1484 aa42.07■■■■■ 4.33
BEX3-202ENST00000372634 ABCA5Q8WWZ7 1642 aa42.04■■■■■ 4.32
BEX3-202ENST00000372634 GAPVD1Q14C86 1478 aa42.03■■■■■ 4.32
BEX3-202ENST00000372634 RIMBP3CA6NJZ7 1639 aa42.02■■■■■ 4.32
BEX3-202ENST00000372634 RIMBP3BA6NNM3 1639 aa42.02■■■■■ 4.32
BEX3-202ENST00000372634 RIMBP3Q9UFD9 1639 aa42.02■■■■■ 4.32
BEX3-202ENST00000372634 MAGI1Q96QZ7 1491 aaPredicted RBP42■■■■■ 4.31
BEX3-202ENST00000372634 ARHGEF11O15085 1522 aa41.92■■■■■ 4.3
BEX3-202ENST00000372634 SYNJ2O15056 1496 aa41.86■■■■■ 4.29
BEX3-202ENST00000372634 CHMP7Q8WUX9 453 aaPredicted RBP41.85■■■■■ 4.29
BEX3-202ENST00000372634 CLASP1Q7Z460 1538 aa41.76■■■■■ 4.28
BEX3-202ENST00000372634 ADAMTS12P58397 1594 aa41.68■■■■■ 4.26
BEX3-202ENST00000372634 ERICH3Q5RHP9 1530 aa41.57■■■■■ 4.25
BEX3-202ENST00000372634 GRIN2AQ12879 1464 aa41.56■■■■■ 4.24
BEX3-202ENST00000372634 ARAP1Q96P48 1450 aa41.56■■■■■ 4.24
BEX3-202ENST00000372634 CYB5RLQ6IPT4 315 aa41.5■■■■■ 4.23
BEX3-202ENST00000372634 FHAD1B1AJZ9 1412 aa41.49■■■■■ 4.23
BEX3-202ENST00000372634 CEP170Q5SW79 1584 aa41.44■■■■■ 4.22
BEX3-202ENST00000372634 NUP160Q12769 1436 aa41.37■■■■■ 4.21
BEX3-202ENST00000372634 KIF27Q86VH2 1401 aa41.27■■■■■ 4.2
BEX3-202ENST00000372634 ERCC6L2Q5T890 1561 aa41.21■■■■■ 4.19
BEX3-202ENST00000372634 SHROOM2Q13796 1616 aa41.18■■■■■ 4.18
BEX3-202ENST00000372634 IGF1RP08069 1367 aa41.17■■■■■ 4.18
BEX3-202ENST00000372634 CUL7Q14999 1698 aa41.14■■■■■ 4.18
BEX3-202ENST00000372634 RUSC2Q8N2Y8 1516 aa41.08■■■■■ 4.17
BEX3-202ENST00000372634 PRG4Q92954 1404 aaPredicted RBP40.93■■■■■ 4.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms