RNA–Protein interactions for RNA: ENST00000279804.2

CTF1-201, Transcript of cardiotrophin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTF1, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-201ENST00000279804 NISCHQ9Y2I1 1504 aa56.72■■■■■ 6.67
CTF1-201ENST00000279804 CCDC180Q9P1Z9 1646 aa50.24■■■■■ 5.63
CTF1-201ENST00000279804 ABCC9O60706 1549 aa48.71■■■■■ 5.39
CTF1-201ENST00000279804 ZCCHC6Q5VYS8 1495 aaKnown RBP47.35■■■■■ 5.17
CTF1-201ENST00000279804 DCAF8L2P0C7V8 631 aa47.23■■■■■ 5.15
CTF1-201ENST00000279804 NACADO15069 1562 aa47.05■■■■■ 5.12
CTF1-201ENST00000279804 RB1CC1Q8TDY2 1594 aa47.02■■■■■ 5.12
CTF1-201ENST00000279804 DCAF1Q9Y4B6 1507 aa46.87■■■■■ 5.09
CTF1-201ENST00000279804 MYO15BQ96JP2 1530 aa46.86■■■■■ 5.09
CTF1-201ENST00000279804 UNC13AQ9UPW8 1703 aa46.18■■■■■ 4.98
CTF1-201ENST00000279804 SCRIBQ14160 1630 aa45.96■■■■■ 4.95
CTF1-201ENST00000279804 BICRAQ9NZM4 1560 aa45.65■■■■■ 4.9
CTF1-201ENST00000279804 PABPN1Q86U42 306 aaKnown RBP eCLIP45.6■■■■■ 4.89
CTF1-201ENST00000279804 SHROOM4Q9ULL8 1493 aa45.21■■■■■ 4.83
CTF1-201ENST00000279804 EIF4G1Q04637 1599 aaKnown RBP44.37■■■■■ 4.69
CTF1-201ENST00000279804 DNAJC5BQ9UF47 199 aa44.26■■■■■ 4.68
CTF1-201ENST00000279804 CECR2Q9BXF3 1484 aa44.19■■■■■ 4.66
CTF1-201ENST00000279804 CC2D2AQ9P2K1 1620 aa44.1■■■■■ 4.65
CTF1-201ENST00000279804 SMARCA4P51532 1647 aa43.96■■■■■ 4.63
CTF1-201ENST00000279804 BAZ1AQ9NRL2 1556 aaPredicted RBP43.91■■■■■ 4.62
CTF1-201ENST00000279804 MROH2BQ7Z745 1585 aa43.78■■■■■ 4.6
CTF1-201ENST00000279804 ATAD2BQ9ULI0 1458 aa43.52■■■■■ 4.56
CTF1-201ENST00000279804 SMARCA2P51531 1590 aa43.49■■■■■ 4.55
CTF1-201ENST00000279804 PEG3Q9GZU2 1588 aa43.45■■■■■ 4.55
CTF1-201ENST00000279804 WIZO95785 1651 aa43.4■■■■■ 4.54
CTF1-201ENST00000279804 RSF1Q96T23 1441 aaPredicted RBP43.4■■■■■ 4.54
CTF1-201ENST00000279804 NCAPD3P42695 1498 aa43.38■■■■■ 4.54
CTF1-201ENST00000279804 HMGXB3Q12766 1538 aa43.26■■■■■ 4.52
CTF1-201ENST00000279804 BAZ1BQ9UIG0 1483 aaKnown RBP43.21■■■■■ 4.51
CTF1-201ENST00000279804 TOP2AP11388 1531 aaKnown RBP42.86■■■■■ 4.45
CTF1-201ENST00000279804 SUPT5HO00267 1087 aaKnown RBP42.73■■■■■ 4.43
CTF1-201ENST00000279804 CCDC88BA6NC98 1476 aa42.36■■■■■ 4.37
CTF1-201ENST00000279804 NESP48681 1621 aa42.33■■■■■ 4.37
CTF1-201ENST00000279804 LAMC3Q9Y6N6 1575 aa42.22■■■■■ 4.35
CTF1-201ENST00000279804 CADPSQ9ULU8 1353 aa42.15■■■■■ 4.34
CTF1-201ENST00000279804 CFTRP13569 1480 aa42.03■■■■■ 4.32
CTF1-201ENST00000279804 PRDM2Q13029 1718 aa41.93■■■■■ 4.3
CTF1-201ENST00000279804 KIF21AQ7Z4S6 1674 aa41.93■■■■■ 4.3
CTF1-201ENST00000279804 ERCC6Q03468 1493 aa41.89■■■■■ 4.3
CTF1-201ENST00000279804 PDS5BQ9NTI5 1447 aa41.84■■■■■ 4.29
CTF1-201ENST00000279804 FANCD2Q9BXW9 1451 aa41.72■■■■■ 4.27
CTF1-201ENST00000279804 CEP164Q9UPV0 1460 aa41.61■■■■■ 4.25
CTF1-201ENST00000279804 THOC2Q8NI27 1593 aaKnown RBP41.58■■■■■ 4.25
CTF1-201ENST00000279804 MRC2Q9UBG0 1479 aa41.44■■■■■ 4.22
CTF1-201ENST00000279804 WDR62O43379 1518 aa41.31■■■■■ 4.2
CTF1-201ENST00000279804 URB2Q14146 1524 aaKnown RBP41.31■■■■■ 4.2
CTF1-201ENST00000279804 CUX2O14529 1486 aa41.21■■■■■ 4.19
CTF1-201ENST00000279804 TOPBP1Q92547 1522 aa41.12■■■■■ 4.17
CTF1-201ENST00000279804 DNMBPQ6XZF7 1577 aa41.12■■■■■ 4.17
CTF1-201ENST00000279804 ABCC8Q09428 1581 aa41.08■■■■■ 4.17
CTF1-201ENST00000279804 CUX1P39880 1505 aa41.03■■■■■ 4.16
CTF1-201ENST00000279804 WRNQ14191 1432 aaPredicted RBP eCLIP40.9■■■■■ 4.14
CTF1-201ENST00000279804 SYNJ1O43426 1573 aa40.87■■■■■ 4.13
CTF1-201ENST00000279804 BIVM-ERCC5R4GMW8 1640 aa40.82■■■■■ 4.13
CTF1-201ENST00000279804 POLA1P09884 1462 aaPredicted RBP40.81■■■■■ 4.12
CTF1-201ENST00000279804 TOP2BQ02880 1626 aa40.8■■■■■ 4.12
CTF1-201ENST00000279804 FGD5Q6ZNL6 1462 aa40.8■■■■■ 4.12
CTF1-201ENST00000279804 TARBP1Q13395 1621 aaKnown RBP40.68■■■■■ 4.1
CTF1-201ENST00000279804 IFT140Q96RY7 1462 aa40.68■■■■■ 4.1
CTF1-201ENST00000279804 RAD54L2Q9Y4B4 1467 aa40.67■■■■■ 4.1
CTF1-201ENST00000279804 SOGA1O94964 1423 aa40.61■■■■■ 4.09
CTF1-201ENST00000279804 ZNF608Q9ULD9 1512 aaPredicted RBP40.55■■■■■ 4.08
CTF1-201ENST00000279804 WDR97A6NE52 1622 aa40.52■■■■■ 4.08
CTF1-201ENST00000279804 EIF4G3O43432 1585 aaKnown RBP40.45■■■■■ 4.07
CTF1-201ENST00000279804 ABCA10Q8WWZ4 1543 aa40.38■■■■■ 4.05
CTF1-201ENST00000279804 AQRO60306 1485 aaKnown RBP eCLIP40.37■■■■■ 4.05
CTF1-201ENST00000279804 TDRD9Q8NDG6 1382 aaKnown RBP40.37■■■■■ 4.05
CTF1-201ENST00000279804 TRIM41Q8WV44 630 aa40.27■■■■■ 4.04
CTF1-201ENST00000279804 ABCA5Q8WWZ7 1642 aa40.25■■■■■ 4.03
CTF1-201ENST00000279804 PBRM1Q86U86 1689 aa40.19■■■■■ 4.02
CTF1-201ENST00000279804 GAPVD1Q14C86 1478 aa40.17■■■■■ 4.02
CTF1-201ENST00000279804 CHIC1Q5VXU3 224 aa40.13■■■■■ 4.01
CTF1-201ENST00000279804 GRIN2BQ13224 1484 aa40.06■■■■■ 4
CTF1-201ENST00000279804 SNAPC4Q5SXM2 1469 aa40.01■■■■□ 3.99
CTF1-201ENST00000279804 KIF27Q86VH2 1401 aa39.97■■■■□ 3.99
CTF1-201ENST00000279804 CHD1O14646 1710 aa39.92■■■■□ 3.98
CTF1-201ENST00000279804 MAGI1Q96QZ7 1491 aaPredicted RBP39.91■■■■□ 3.98
CTF1-201ENST00000279804 ERICH3Q5RHP9 1530 aa39.9■■■■□ 3.98
CTF1-201ENST00000279804 RUSC2Q8N2Y8 1516 aa39.9■■■■□ 3.98
CTF1-201ENST00000279804 ADAMTS12P58397 1594 aa39.82■■■■□ 3.96
CTF1-201ENST00000279804 FBLN2P98095 1184 aa39.78■■■■□ 3.96
CTF1-201ENST00000279804 SYNJ2O15056 1496 aa39.76■■■■□ 3.96
CTF1-201ENST00000279804 IGF1RP08069 1367 aa39.75■■■■□ 3.95
CTF1-201ENST00000279804 CHMP7Q8WUX9 453 aaPredicted RBP39.7■■■■□ 3.95
CTF1-201ENST00000279804 CUL7Q14999 1698 aa39.69■■■■□ 3.94
CTF1-201ENST00000279804 FHAD1B1AJZ9 1412 aa39.68■■■■□ 3.94
CTF1-201ENST00000279804 GRIN2AQ12879 1464 aa39.59■■■■□ 3.93
CTF1-201ENST00000279804 OSCARQ8IYS5 282 aa39.59■■■■□ 3.93
CTF1-201ENST00000279804 CARMIL1Q5VZK9 1371 aa39.53■■■■□ 3.92
CTF1-201ENST00000279804 FAM9AQ8IZU1 332 aaPredicted RBP39.52■■■■□ 3.92
CTF1-201ENST00000279804 EEA1Q15075 1411 aa39.48■■■■□ 3.91
CTF1-201ENST00000279804 CEP170Q5SW79 1584 aa39.44■■■■□ 3.9
CTF1-201ENST00000279804 CSRNP3Q8WYN3 585 aa39.41■■■■□ 3.9
CTF1-201ENST00000279804 DNAJC5Q9H3Z4 198 aa39.37■■■■□ 3.89
CTF1-201ENST00000279804 RAPGEF2Q9Y4G8 1499 aa39.37■■■■□ 3.89
CTF1-201ENST00000279804 CLASP1Q7Z460 1538 aa39.36■■■■□ 3.89
CTF1-201ENST00000279804 NUP160Q12769 1436 aa39.36■■■■□ 3.89
CTF1-201ENST00000279804 PRXQ9BXM0 1461 aa39.35■■■■□ 3.89
CTF1-201ENST00000279804 KIF21BO75037 1637 aa39.16■■■■□ 3.86
CTF1-201ENST00000279804 CTTNBP2Q8WZ74 1663 aa39.12■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms