RNA–Protein interactions for RNA: ENST00000407067.1

MDK-206, Transcript of midkine, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MDK, Length 1,026 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDK-206ENST00000407067 NISCHQ9Y2I1 1504 aa58.52■■■■■ 6.96
MDK-206ENST00000407067 CCDC180Q9P1Z9 1646 aa52.29■■■■■ 5.96
MDK-206ENST00000407067 ABCC9O60706 1549 aa51.13■■■■■ 5.78
MDK-206ENST00000407067 RB1CC1Q8TDY2 1594 aa49.23■■■■■ 5.47
MDK-206ENST00000407067 NACADO15069 1562 aa49.11■■■■■ 5.45
MDK-206ENST00000407067 MYO15BQ96JP2 1530 aa48.78■■■■■ 5.4
MDK-206ENST00000407067 DCAF8L2P0C7V8 631 aa48.74■■■■■ 5.39
MDK-206ENST00000407067 ZCCHC6Q5VYS8 1495 aaKnown RBP48.74■■■■■ 5.39
MDK-206ENST00000407067 DCAF1Q9Y4B6 1507 aa48.48■■■■■ 5.35
MDK-206ENST00000407067 UNC13AQ9UPW8 1703 aa48.22■■■■■ 5.31
MDK-206ENST00000407067 BICRAQ9NZM4 1560 aa47.72■■■■■ 5.23
MDK-206ENST00000407067 PABPN1Q86U42 306 aaKnown RBP eCLIP47.63■■■■■ 5.22
MDK-206ENST00000407067 SCRIBQ14160 1630 aa47.55■■■■■ 5.2
MDK-206ENST00000407067 SHROOM4Q9ULL8 1493 aa47.28■■■■■ 5.16
MDK-206ENST00000407067 DNAJC5BQ9UF47 199 aa47.01■■■■■ 5.12
MDK-206ENST00000407067 EIF4G1Q04637 1599 aaKnown RBP46.47■■■■■ 5.03
MDK-206ENST00000407067 CC2D2AQ9P2K1 1620 aa46.34■■■■■ 5.01
MDK-206ENST00000407067 CECR2Q9BXF3 1484 aa46■■■■■ 4.95
MDK-206ENST00000407067 SMARCA4P51532 1647 aa45.52■■■■■ 4.88
MDK-206ENST00000407067 BAZ1AQ9NRL2 1556 aaPredicted RBP45.41■■■■■ 4.86
MDK-206ENST00000407067 SMARCA2P51531 1590 aa45.24■■■■■ 4.83
MDK-206ENST00000407067 NCAPD3P42695 1498 aa45.24■■■■■ 4.83
MDK-206ENST00000407067 ATAD2BQ9ULI0 1458 aa45.23■■■■■ 4.83
MDK-206ENST00000407067 HMGXB3Q12766 1538 aa45.1■■■■■ 4.81
MDK-206ENST00000407067 PEG3Q9GZU2 1588 aa45.09■■■■■ 4.81
MDK-206ENST00000407067 MROH2BQ7Z745 1585 aa45.07■■■■■ 4.8
MDK-206ENST00000407067 BAZ1BQ9UIG0 1483 aaKnown RBP44.86■■■■■ 4.77
MDK-206ENST00000407067 WIZO95785 1651 aa44.62■■■■■ 4.73
MDK-206ENST00000407067 RSF1Q96T23 1441 aaPredicted RBP44.43■■■■■ 4.7
MDK-206ENST00000407067 NESP48681 1621 aa44.2■■■■■ 4.67
MDK-206ENST00000407067 LAMC3Q9Y6N6 1575 aa44.18■■■■■ 4.66
MDK-206ENST00000407067 TOP2AP11388 1531 aaKnown RBP44.15■■■■■ 4.66
MDK-206ENST00000407067 ERCC6Q03468 1493 aa44.12■■■■■ 4.65
MDK-206ENST00000407067 CADPSQ9ULU8 1353 aa43.88■■■■■ 4.61
MDK-206ENST00000407067 KIF21AQ7Z4S6 1674 aa43.82■■■■■ 4.61
MDK-206ENST00000407067 CUX2O14529 1486 aa43.8■■■■■ 4.6
MDK-206ENST00000407067 PDS5BQ9NTI5 1447 aa43.79■■■■■ 4.6
MDK-206ENST00000407067 THOC2Q8NI27 1593 aaKnown RBP43.71■■■■■ 4.59
MDK-206ENST00000407067 CFTRP13569 1480 aa43.62■■■■■ 4.57
MDK-206ENST00000407067 CCDC88BA6NC98 1476 aa43.54■■■■■ 4.56
MDK-206ENST00000407067 PRDM2Q13029 1718 aa43.52■■■■■ 4.56
MDK-206ENST00000407067 FANCD2Q9BXW9 1451 aa43.41■■■■■ 4.54
MDK-206ENST00000407067 CEP164Q9UPV0 1460 aa43.41■■■■■ 4.54
MDK-206ENST00000407067 MRC2Q9UBG0 1479 aa43.38■■■■■ 4.54
MDK-206ENST00000407067 WDR62O43379 1518 aa43.3■■■■■ 4.52
MDK-206ENST00000407067 SUPT5HO00267 1087 aaKnown RBP43.01■■■■■ 4.48
MDK-206ENST00000407067 URB2Q14146 1524 aaKnown RBP43■■■■■ 4.47
MDK-206ENST00000407067 ABCC8Q09428 1581 aa42.73■■■■■ 4.43
MDK-206ENST00000407067 TOPBP1Q92547 1522 aa42.71■■■■■ 4.43
MDK-206ENST00000407067 DNMBPQ6XZF7 1577 aa42.7■■■■■ 4.43
MDK-206ENST00000407067 DNAJC5Q9H3Z4 198 aa42.56■■■■■ 4.4
MDK-206ENST00000407067 IFT140Q96RY7 1462 aa42.5■■■■■ 4.39
MDK-206ENST00000407067 POLA1P09884 1462 aaPredicted RBP42.34■■■■■ 4.37
MDK-206ENST00000407067 TARBP1Q13395 1621 aaKnown RBP42.32■■■■■ 4.37
MDK-206ENST00000407067 CUX1P39880 1505 aa42.3■■■■■ 4.36
MDK-206ENST00000407067 ZNF608Q9ULD9 1512 aaPredicted RBP42.28■■■■■ 4.36
MDK-206ENST00000407067 EIF4G3O43432 1585 aaKnown RBP42.22■■■■■ 4.35
MDK-206ENST00000407067 FGD5Q6ZNL6 1462 aa42.2■■■■■ 4.35
MDK-206ENST00000407067 SOGA1O94964 1423 aa42.09■■■■■ 4.33
MDK-206ENST00000407067 RAD54L2Q9Y4B4 1467 aa42.09■■■■■ 4.33
MDK-206ENST00000407067 WDR97A6NE52 1622 aa42.06■■■■■ 4.32
MDK-206ENST00000407067 BIVM-ERCC5R4GMW8 1640 aa42■■■■■ 4.31
MDK-206ENST00000407067 AQRO60306 1485 aaKnown RBP eCLIP41.98■■■■■ 4.311e-9■■■■■ 32.7
MDK-206ENST00000407067 TOP2BQ02880 1626 aa41.95■■■■■ 4.31
MDK-206ENST00000407067 WRNQ14191 1432 aaPredicted RBP eCLIP41.93■■■■■ 4.3
MDK-206ENST00000407067 SYNJ1O43426 1573 aa41.89■■■■■ 4.3
MDK-206ENST00000407067 TDRD9Q8NDG6 1382 aaKnown RBP41.84■■■■■ 4.29
MDK-206ENST00000407067 OSCARQ8IYS5 282 aa41.8■■■■■ 4.28
MDK-206ENST00000407067 ABCA10Q8WWZ4 1543 aa41.79■■■■■ 4.28
MDK-206ENST00000407067 CHD1O14646 1710 aa41.78■■■■■ 4.28
MDK-206ENST00000407067 PBRM1Q86U86 1689 aa41.73■■■■■ 4.27
MDK-206ENST00000407067 ABCA5Q8WWZ7 1642 aa41.72■■■■■ 4.27
MDK-206ENST00000407067 GRIN2BQ13224 1484 aa41.69■■■■■ 4.26
MDK-206ENST00000407067 SNAPC4Q5SXM2 1469 aa41.66■■■■■ 4.26
MDK-206ENST00000407067 GAPVD1Q14C86 1478 aa41.65■■■■■ 4.26
MDK-206ENST00000407067 MAGI1Q96QZ7 1491 aaPredicted RBP41.63■■■■■ 4.25
MDK-206ENST00000407067 SYNJ2O15056 1496 aa41.45■■■■■ 4.23
MDK-206ENST00000407067 FBLN2P98095 1184 aa41.44■■■■■ 4.22
MDK-206ENST00000407067 CHMP7Q8WUX9 453 aaPredicted RBP41.33■■■■■ 4.21
MDK-206ENST00000407067 ADAMTS12P58397 1594 aa41.33■■■■■ 4.21
MDK-206ENST00000407067 ERICH3Q5RHP9 1530 aa41.32■■■■■ 4.2
MDK-206ENST00000407067 RIMBP3CA6NJZ7 1639 aa41.31■■■■■ 4.2
MDK-206ENST00000407067 RIMBP3BA6NNM3 1639 aa41.31■■■■■ 4.2
MDK-206ENST00000407067 RIMBP3Q9UFD9 1639 aa41.31■■■■■ 4.2
MDK-206ENST00000407067 CLASP1Q7Z460 1538 aa41.26■■■■■ 4.2
MDK-206ENST00000407067 ARHGEF11O15085 1522 aa41.24■■■■■ 4.19
MDK-206ENST00000407067 FHAD1B1AJZ9 1412 aa41.16■■■■■ 4.18
MDK-206ENST00000407067 GRIN2AQ12879 1464 aa41.15■■■■■ 4.18
MDK-206ENST00000407067 KIF27Q86VH2 1401 aa41.07■■■■■ 4.16
MDK-206ENST00000407067 TRIM41Q8WV44 630 aa41.02■■■■■ 4.16
MDK-206ENST00000407067 NUP160Q12769 1436 aa40.99■■■■■ 4.15
MDK-206ENST00000407067 CEP170Q5SW79 1584 aa40.99■■■■■ 4.15
MDK-206ENST00000407067 CUL7Q14999 1698 aa40.97■■■■■ 4.15
MDK-206ENST00000407067 ARAP1Q96P48 1450 aa40.88■■■■■ 4.13
MDK-206ENST00000407067 IGF1RP08069 1367 aa40.86■■■■■ 4.13
MDK-206ENST00000407067 SHROOM2Q13796 1616 aa40.78■■■■■ 4.12
MDK-206ENST00000407067 RUSC2Q8N2Y8 1516 aa40.73■■■■■ 4.11
MDK-206ENST00000407067 CYB5RLQ6IPT4 315 aa40.72■■■■■ 4.11
MDK-206ENST00000407067 CARMIL1Q5VZK9 1371 aa40.64■■■■■ 4.1
MDK-206ENST00000407067 ERCC6L2Q5T890 1561 aa40.61■■■■■ 4.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms