RNA–Protein interactions for RNA: ENST00000573944.5

PKMYT1-211, Transcript of protein kinase, membrane associated tyrosine/threonine 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PKMYT1, Length 1,891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMYT1-211ENST00000573944 NISCHQ9Y2I1 1504 aa53.68■■■■■ 6.18
PKMYT1-211ENST00000573944 CCDC180Q9P1Z9 1646 aa46.92■■■■■ 5.1
PKMYT1-211ENST00000573944 ZCCHC6Q5VYS8 1495 aaKnown RBP45.05■■■■■ 4.8
PKMYT1-211ENST00000573944 DCAF8L2P0C7V8 631 aa44.44■■■■■ 4.71
PKMYT1-211ENST00000573944 ABCC9O60706 1549 aa44.43■■■■■ 4.7
PKMYT1-211ENST00000573944 DCAF1Q9Y4B6 1507 aa44.38■■■■■ 4.69
PKMYT1-211ENST00000573944 MYO15BQ96JP2 1530 aa43.89■■■■■ 4.62
PKMYT1-211ENST00000573944 SHROOM4Q9ULL8 1493 aa43.73■■■■■ 4.59
PKMYT1-211ENST00000573944 NACADO15069 1562 aa43.71■■■■■ 4.59
PKMYT1-211ENST00000573944 RB1CC1Q8TDY2 1594 aa43.38■■■■■ 4.53
PKMYT1-211ENST00000573944 SCRIBQ14160 1630 aa43.12■■■■■ 4.49
PKMYT1-211ENST00000573944 UNC13AQ9UPW8 1703 aa42.57■■■■■ 4.4
PKMYT1-211ENST00000573944 SUPT5HO00267 1087 aaKnown RBP42.04■■■■■ 4.32
PKMYT1-211ENST00000573944 BICRAQ9NZM4 1560 aa42.02■■■■■ 4.32
PKMYT1-211ENST00000573944 PABPN1Q86U42 306 aaKnown RBP eCLIP41.86■■■■■ 4.29
PKMYT1-211ENST00000573944 CECR2Q9BXF3 1484 aa41.69■■■■■ 4.26
PKMYT1-211ENST00000573944 RSF1Q96T23 1441 aaPredicted RBP41.58■■■■■ 4.25
PKMYT1-211ENST00000573944 BAZ1AQ9NRL2 1556 aaPredicted RBP41.49■■■■■ 4.23
PKMYT1-211ENST00000573944 MROH2BQ7Z745 1585 aa41.46■■■■■ 4.23
PKMYT1-211ENST00000573944 SMARCA4P51532 1647 aa41.32■■■■■ 4.21
PKMYT1-211ENST00000573944 WIZO95785 1651 aa41.17■■■■■ 4.18
PKMYT1-211ENST00000573944 PEG3Q9GZU2 1588 aa40.8■■■■■ 4.12
PKMYT1-211ENST00000573944 EIF4G1Q04637 1599 aaKnown RBP40.78■■■■■ 4.12
PKMYT1-211ENST00000573944 TOP2AP11388 1531 aaKnown RBP40.71■■■■■ 4.11
PKMYT1-211ENST00000573944 SMARCA2P51531 1590 aa40.66■■■■■ 4.1
PKMYT1-211ENST00000573944 ATAD2BQ9ULI0 1458 aa40.63■■■■■ 4.09
PKMYT1-211ENST00000573944 BAZ1BQ9UIG0 1483 aaKnown RBP40.43■■■■■ 4.06
PKMYT1-211ENST00000573944 NCAPD3P42695 1498 aa40.29■■■■■ 4.04
PKMYT1-211ENST00000573944 CCDC88BA6NC98 1476 aa40.28■■■■■ 4.04
PKMYT1-211ENST00000573944 HMGXB3Q12766 1538 aa40.26■■■■■ 4.04
PKMYT1-211ENST00000573944 CC2D2AQ9P2K1 1620 aa40.23■■■■■ 4.03
PKMYT1-211ENST00000573944 CHIC1Q5VXU3 224 aa40.14■■■■■ 4.02
PKMYT1-211ENST00000573944 TRIM41Q8WV44 630 aa39.55■■■■□ 3.92
PKMYT1-211ENST00000573944 ABCC8Q09428 1581 aa39.42■■■■□ 3.9
PKMYT1-211ENST00000573944 CFTRP13569 1480 aa39.38■■■■□ 3.9
PKMYT1-211ENST00000573944 PRDM2Q13029 1718 aa39.31■■■■□ 3.88
PKMYT1-211ENST00000573944 CADPSQ9ULU8 1353 aa39.27■■■■□ 3.88
PKMYT1-211ENST00000573944 DNAJC5BQ9UF47 199 aa39.22■■■■□ 3.87
PKMYT1-211ENST00000573944 WRNQ14191 1432 aaPredicted RBP eCLIP39.17■■■■□ 3.861e-7■■□□□ 12.5
PKMYT1-211ENST00000573944 SYNJ1O43426 1573 aa39.01■■■■□ 3.84
PKMYT1-211ENST00000573944 LAMC3Q9Y6N6 1575 aa39■■■■□ 3.83
PKMYT1-211ENST00000573944 NESP48681 1621 aa38.96■■■■□ 3.83
PKMYT1-211ENST00000573944 TOP2BQ02880 1626 aa38.89■■■■□ 3.82
PKMYT1-211ENST00000573944 BIVM-ERCC5R4GMW8 1640 aa38.86■■■■□ 3.81
PKMYT1-211ENST00000573944 FANCD2Q9BXW9 1451 aa38.85■■■■□ 3.81
PKMYT1-211ENST00000573944 FAM9AQ8IZU1 332 aaPredicted RBP38.81■■■■□ 3.8
PKMYT1-211ENST00000573944 CUX1P39880 1505 aa38.78■■■■□ 3.8
PKMYT1-211ENST00000573944 PDS5BQ9NTI5 1447 aa38.69■■■■□ 3.78
PKMYT1-211ENST00000573944 CEP164Q9UPV0 1460 aa38.64■■■■□ 3.78
PKMYT1-211ENST00000573944 SOGA1O94964 1423 aa38.62■■■■□ 3.77
PKMYT1-211ENST00000573944 LOC105371045A0A1W2PR82 267 aa38.62■■■■□ 3.77
PKMYT1-211ENST00000573944 KIF21AQ7Z4S6 1674 aa38.57■■■■□ 3.77
PKMYT1-211ENST00000573944 EEA1Q15075 1411 aa38.56■■■■□ 3.76
PKMYT1-211ENST00000573944 DNMBPQ6XZF7 1577 aa38.49■■■■□ 3.75
PKMYT1-211ENST00000573944 RUSC2Q8N2Y8 1516 aa38.48■■■■□ 3.75
PKMYT1-211ENST00000573944 TOPBP1Q92547 1522 aa38.42■■■■□ 3.74
PKMYT1-211ENST00000573944 FGD5Q6ZNL6 1462 aa38.38■■■■□ 3.74
PKMYT1-211ENST00000573944 CSRNP3Q8WYN3 585 aa38.36■■■■□ 3.73
PKMYT1-211ENST00000573944 URB2Q14146 1524 aaKnown RBP38.35■■■■□ 3.73
PKMYT1-211ENST00000573944 EHMT2Q96KQ7 1210 aa38.28■■■■□ 3.72
PKMYT1-211ENST00000573944 POLA1P09884 1462 aaPredicted RBP38.21■■■■□ 3.71
PKMYT1-211ENST00000573944 KIF27Q86VH2 1401 aa38.21■■■■□ 3.71
PKMYT1-211ENST00000573944 MRC2Q9UBG0 1479 aa38.18■■■■□ 3.7
PKMYT1-211ENST00000573944 ERCC6Q03468 1493 aa38.15■■■■□ 3.7
PKMYT1-211ENST00000573944 CUX2O14529 1486 aa38.12■■■■□ 3.69
PKMYT1-211ENST00000573944 KIF21BO75037 1637 aa38.08■■■■□ 3.69
PKMYT1-211ENST00000573944 RAD54L2Q9Y4B4 1467 aa38.08■■■■□ 3.69
PKMYT1-211ENST00000573944 ABCA10Q8WWZ4 1543 aa38.04■■■■□ 3.68
PKMYT1-211ENST00000573944 GOLGA3Q08378 1498 aa38.02■■■■□ 3.68
PKMYT1-211ENST00000573944 WDR62O43379 1518 aa37.98■■■■□ 3.67
PKMYT1-211ENST00000573944 WDR97A6NE52 1622 aa37.96■■■■□ 3.67
PKMYT1-211ENST00000573944 UBTFP17480 764 aaKnown RBP37.91■■■■□ 3.66
PKMYT1-211ENST00000573944 THOC2Q8NI27 1593 aaKnown RBP37.9■■■■□ 3.66
PKMYT1-211ENST00000573944 PRXQ9BXM0 1461 aa37.88■■■■□ 3.65
PKMYT1-211ENST00000573944 TARBP1Q13395 1621 aaKnown RBP37.87■■■■□ 3.65
PKMYT1-211ENST00000573944 TNIKQ9UKE5 1360 aa37.86■■■■□ 3.65
PKMYT1-211ENST00000573944 RAPGEF2Q9Y4G8 1499 aa37.85■■■■□ 3.65
PKMYT1-211ENST00000573944 ERICH3Q5RHP9 1530 aa37.84■■■■□ 3.65
PKMYT1-211ENST00000573944 IGF1RP08069 1367 aa37.84■■■■□ 3.65
PKMYT1-211ENST00000573944 ABCA5Q8WWZ7 1642 aa37.75■■■■□ 3.63
PKMYT1-211ENST00000573944 TDRD9Q8NDG6 1382 aaKnown RBP37.73■■■■□ 3.63
PKMYT1-211ENST00000573944 GAPVD1Q14C86 1478 aa37.7■■■■□ 3.62
PKMYT1-211ENST00000573944 IFT140Q96RY7 1462 aa37.7■■■■□ 3.62
PKMYT1-211ENST00000573944 CARMIL1Q5VZK9 1371 aa37.68■■■■□ 3.62
PKMYT1-211ENST00000573944 CEP162Q5TB80 1403 aa37.67■■■■□ 3.62
PKMYT1-211ENST00000573944 CUL7Q14999 1698 aa37.64■■■■□ 3.62
PKMYT1-211ENST00000573944 PBRM1Q86U86 1689 aa37.55■■■■□ 3.6
PKMYT1-211ENST00000573944 AQRO60306 1485 aaKnown RBP eCLIP37.51■■■■□ 3.592e-7■■■■■ 33.8
PKMYT1-211ENST00000573944 ZNF608Q9ULD9 1512 aaPredicted RBP37.48■■■■□ 3.59
PKMYT1-211ENST00000573944 CLIP1P30622 1438 aa37.41■■■■□ 3.58
PKMYT1-211ENST00000573944 GRIN2BQ13224 1484 aa37.41■■■■□ 3.58
PKMYT1-211ENST00000573944 EIF4G3O43432 1585 aaKnown RBP37.39■■■■□ 3.58
PKMYT1-211ENST00000573944 RANGAP1P46060 587 aaPredicted RBP37.33■■■■□ 3.57
PKMYT1-211ENST00000573944 ADAMTS12P58397 1594 aa37.27■■■■□ 3.56
PKMYT1-211ENST00000573944 FHAD1B1AJZ9 1412 aa37.27■■■■□ 3.56
PKMYT1-211ENST00000573944 CTTNBP2Q8WZ74 1663 aa37.25■■■■□ 3.55
PKMYT1-211ENST00000573944 SNAPC4Q5SXM2 1469 aa37.16■■■■□ 3.54
PKMYT1-211ENST00000573944 MAGI1Q96QZ7 1491 aaPredicted RBP37.11■■■■□ 3.53
PKMYT1-211ENST00000573944 VPS8Q8N3P4 1428 aa37.06■■■■□ 3.52
PKMYT1-211ENST00000573944 ARHGAP35Q9NRY4 1499 aa37.05■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms