RNA–Protein interactions for RNA: ENST00000353341.8

HNRNPD-203, Transcript of heterogeneous nuclear ribonucleoprotein D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HNRNPD, Length 1,585 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPD-203ENST00000353341 NISCHQ9Y2I1 1504 aa55.79■■■■■ 6.52
HNRNPD-203ENST00000353341 CCDC180Q9P1Z9 1646 aa49.27■■■■■ 5.48
HNRNPD-203ENST00000353341 ABCC9O60706 1549 aa47.5■■■■■ 5.19
HNRNPD-203ENST00000353341 ZCCHC6Q5VYS8 1495 aaKnown RBP46.64■■■■■ 5.06
HNRNPD-203ENST00000353341 DCAF8L2P0C7V8 631 aa46.38■■■■■ 5.01
HNRNPD-203ENST00000353341 DCAF1Q9Y4B6 1507 aa46.16■■■■■ 4.98
HNRNPD-203ENST00000353341 NACADO15069 1562 aa46.12■■■■■ 4.97
HNRNPD-203ENST00000353341 MYO15BQ96JP2 1530 aa46.05■■■■■ 4.96
HNRNPD-203ENST00000353341 RB1CC1Q8TDY2 1594 aa46■■■■■ 4.96
HNRNPD-203ENST00000353341 SCRIBQ14160 1630 aa45.06■■■■■ 4.8
HNRNPD-203ENST00000353341 UNC13AQ9UPW8 1703 aa45.03■■■■■ 4.8
HNRNPD-203ENST00000353341 SHROOM4Q9ULL8 1493 aa44.62■■■■■ 4.73
HNRNPD-203ENST00000353341 BICRAQ9NZM4 1560 aa44.58■■■■■ 4.73
HNRNPD-203ENST00000353341 PABPN1Q86U42 306 aaKnown RBP eCLIP44.52■■■■■ 4.72
HNRNPD-203ENST00000353341 CECR2Q9BXF3 1484 aa43.4■■■■■ 4.54
HNRNPD-203ENST00000353341 EIF4G1Q04637 1599 aaKnown RBP43.35■■■■■ 4.53
HNRNPD-203ENST00000353341 BAZ1AQ9NRL2 1556 aaPredicted RBP43.19■■■■■ 4.5
HNRNPD-203ENST00000353341 SMARCA4P51532 1647 aa43.15■■■■■ 4.5
HNRNPD-203ENST00000353341 MROH2BQ7Z745 1585 aa43.03■■■■■ 4.48
HNRNPD-203ENST00000353341 CC2D2AQ9P2K1 1620 aa42.99■■■■■ 4.47
HNRNPD-203ENST00000353341 DNAJC5BQ9UF47 199 aa42.86■■■■■ 4.45
HNRNPD-203ENST00000353341 RSF1Q96T23 1441 aaPredicted RBP42.8■■■■■ 4.44
HNRNPD-203ENST00000353341 ATAD2BQ9ULI0 1458 aa42.69■■■■■ 4.42
HNRNPD-203ENST00000353341 SMARCA2P51531 1590 aa42.69■■■■■ 4.42
HNRNPD-203ENST00000353341 PEG3Q9GZU2 1588 aa42.68■■■■■ 4.42
HNRNPD-203ENST00000353341 WIZO95785 1651 aa42.64■■■■■ 4.42
HNRNPD-203ENST00000353341 NCAPD3P42695 1498 aa42.53■■■■■ 4.4
HNRNPD-203ENST00000353341 HMGXB3Q12766 1538 aa42.41■■■■■ 4.38
HNRNPD-203ENST00000353341 BAZ1BQ9UIG0 1483 aaKnown RBP42.41■■■■■ 4.38
HNRNPD-203ENST00000353341 SUPT5HO00267 1087 aaKnown RBP42.37■■■■■ 4.37
HNRNPD-203ENST00000353341 TOP2AP11388 1531 aaKnown RBP42.19■■■■■ 4.34
HNRNPD-203ENST00000353341 CCDC88BA6NC98 1476 aa41.7■■■■■ 4.27
HNRNPD-203ENST00000353341 CADPSQ9ULU8 1353 aa41.35■■■■■ 4.21
HNRNPD-203ENST00000353341 NESP48681 1621 aa41.33■■■■■ 4.21
HNRNPD-203ENST00000353341 LAMC3Q9Y6N6 1575 aa41.31■■■■■ 4.2
HNRNPD-203ENST00000353341 CFTRP13569 1480 aa41.26■■■■■ 4.2
HNRNPD-203ENST00000353341 PRDM2Q13029 1718 aa41.08■■■■■ 4.17
HNRNPD-203ENST00000353341 PDS5BQ9NTI5 1447 aa41■■■■■ 4.15
HNRNPD-203ENST00000353341 FANCD2Q9BXW9 1451 aa40.89■■■■■ 4.14
HNRNPD-203ENST00000353341 KIF21AQ7Z4S6 1674 aa40.89■■■■■ 4.14
HNRNPD-203ENST00000353341 ERCC6Q03468 1493 aa40.88■■■■■ 4.13
HNRNPD-203ENST00000353341 CEP164Q9UPV0 1460 aa40.77■■■■■ 4.12
HNRNPD-203ENST00000353341 MRC2Q9UBG0 1479 aa40.54■■■■■ 4.08
HNRNPD-203ENST00000353341 THOC2Q8NI27 1593 aaKnown RBP40.52■■■■■ 4.08
HNRNPD-203ENST00000353341 ABCC8Q09428 1581 aa40.45■■■■■ 4.07
HNRNPD-203ENST00000353341 URB2Q14146 1524 aaKnown RBP40.44■■■■■ 4.06
HNRNPD-203ENST00000353341 WDR62O43379 1518 aa40.38■■■■■ 4.05
HNRNPD-203ENST00000353341 WRNQ14191 1432 aaPredicted RBP eCLIP40.35■■■■■ 4.055e-6■■■■■ 29.2
HNRNPD-203ENST00000353341 DNMBPQ6XZF7 1577 aa40.35■■■■■ 4.05
HNRNPD-203ENST00000353341 TOPBP1Q92547 1522 aa40.33■■■■■ 4.05
HNRNPD-203ENST00000353341 CUX1P39880 1505 aa40.32■■■■■ 4.04
HNRNPD-203ENST00000353341 SYNJ1O43426 1573 aa40.23■■■■■ 4.03
HNRNPD-203ENST00000353341 TOP2BQ02880 1626 aa40.18■■■■■ 4.02
HNRNPD-203ENST00000353341 BIVM-ERCC5R4GMW8 1640 aa40.17■■■■■ 4.02
HNRNPD-203ENST00000353341 CUX2O14529 1486 aa40.11■■■■■ 4.01
HNRNPD-203ENST00000353341 FGD5Q6ZNL6 1462 aa40.07■■■■■ 4
HNRNPD-203ENST00000353341 POLA1P09884 1462 aaPredicted RBP40.04■■■■■ 4
HNRNPD-203ENST00000353341 CHIC1Q5VXU3 224 aa39.96■■■■□ 3.99
HNRNPD-203ENST00000353341 TRIM41Q8WV44 630 aa39.96■■■■□ 3.99
HNRNPD-203ENST00000353341 SOGA1O94964 1423 aa39.89■■■■□ 3.98
HNRNPD-203ENST00000353341 RAD54L2Q9Y4B4 1467 aa39.87■■■■□ 3.97
HNRNPD-203ENST00000353341 IFT140Q96RY7 1462 aa39.87■■■■□ 3.97
HNRNPD-203ENST00000353341 TARBP1Q13395 1621 aaKnown RBP39.84■■■■□ 3.97
HNRNPD-203ENST00000353341 WDR97A6NE52 1622 aa39.7■■■■□ 3.95
HNRNPD-203ENST00000353341 ABCA10Q8WWZ4 1543 aa39.7■■■■□ 3.95
HNRNPD-203ENST00000353341 ZNF608Q9ULD9 1512 aaPredicted RBP39.65■■■■□ 3.94
HNRNPD-203ENST00000353341 TDRD9Q8NDG6 1382 aaKnown RBP39.58■■■■□ 3.93
HNRNPD-203ENST00000353341 EIF4G3O43432 1585 aaKnown RBP39.54■■■■□ 3.92
HNRNPD-203ENST00000353341 AQRO60306 1485 aaKnown RBP eCLIP39.53■■■■□ 3.923e-13■■■■□ 21.1
HNRNPD-203ENST00000353341 ABCA5Q8WWZ7 1642 aa39.49■■■■□ 3.91
HNRNPD-203ENST00000353341 GAPVD1Q14C86 1478 aa39.45■■■■□ 3.91
HNRNPD-203ENST00000353341 KIF27Q86VH2 1401 aa39.44■■■■□ 3.9
HNRNPD-203ENST00000353341 PBRM1Q86U86 1689 aa39.35■■■■□ 3.89
HNRNPD-203ENST00000353341 RUSC2Q8N2Y8 1516 aa39.35■■■■□ 3.89
HNRNPD-203ENST00000353341 GRIN2BQ13224 1484 aa39.33■■■■□ 3.89
HNRNPD-203ENST00000353341 ERICH3Q5RHP9 1530 aa39.24■■■■□ 3.87
HNRNPD-203ENST00000353341 EEA1Q15075 1411 aa39.19■■■■□ 3.86
HNRNPD-203ENST00000353341 SNAPC4Q5SXM2 1469 aa39.18■■■■□ 3.86
HNRNPD-203ENST00000353341 IGF1RP08069 1367 aa39.17■■■■□ 3.86
HNRNPD-203ENST00000353341 FAM9AQ8IZU1 332 aaPredicted RBP39.15■■■■□ 3.86
HNRNPD-203ENST00000353341 MAGI1Q96QZ7 1491 aaPredicted RBP39.13■■■■□ 3.85
HNRNPD-203ENST00000353341 CUL7Q14999 1698 aa39.06■■■■□ 3.84
HNRNPD-203ENST00000353341 ADAMTS12P58397 1594 aa39.05■■■■□ 3.84
HNRNPD-203ENST00000353341 CSRNP3Q8WYN3 585 aa39.04■■■■□ 3.84
HNRNPD-203ENST00000353341 FHAD1B1AJZ9 1412 aa39■■■■□ 3.83
HNRNPD-203ENST00000353341 SYNJ2O15056 1496 aa38.98■■■■□ 3.83
HNRNPD-203ENST00000353341 CARMIL1Q5VZK9 1371 aa38.97■■■■□ 3.83
HNRNPD-203ENST00000353341 FBLN2P98095 1184 aa38.94■■■■□ 3.82
HNRNPD-203ENST00000353341 CHD1O14646 1710 aa38.92■■■■□ 3.82
HNRNPD-203ENST00000353341 CHMP7Q8WUX9 453 aaPredicted RBP38.92■■■■□ 3.82
HNRNPD-203ENST00000353341 PRXQ9BXM0 1461 aa38.86■■■■□ 3.81
HNRNPD-203ENST00000353341 GRIN2AQ12879 1464 aa38.83■■■■□ 3.81
HNRNPD-203ENST00000353341 RAPGEF2Q9Y4G8 1499 aa38.83■■■■□ 3.81
HNRNPD-203ENST00000353341 KIF21BO75037 1637 aa38.75■■■■□ 3.79
HNRNPD-203ENST00000353341 CEP170Q5SW79 1584 aa38.62■■■■□ 3.77
HNRNPD-203ENST00000353341 OSCARQ8IYS5 282 aa38.61■■■■□ 3.77
HNRNPD-203ENST00000353341 EHMT2Q96KQ7 1210 aa38.61■■■■□ 3.77
HNRNPD-203ENST00000353341 NUP160Q12769 1436 aa38.6■■■■□ 3.77
HNRNPD-203ENST00000353341 GOLGA3Q08378 1498 aa38.58■■■■□ 3.77
HNRNPD-203ENST00000353341 CTTNBP2Q8WZ74 1663 aa38.46■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms