RNA–Protein interactions for RNA: ENST00000302279.7

FNTA-201, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNTA, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-201ENST00000302279 NISCHQ9Y2I1 1504 aa53.19■■■■■ 6.11
FNTA-201ENST00000302279 CCDC180Q9P1Z9 1646 aa46.31■■■■■ 5
FNTA-201ENST00000302279 ZCCHC6Q5VYS8 1495 aaKnown RBP44.76■■■■■ 4.76
FNTA-201ENST00000302279 DCAF1Q9Y4B6 1507 aa44■■■■■ 4.63
FNTA-201ENST00000302279 DCAF8L2P0C7V8 631 aa43.76■■■■■ 4.6
FNTA-201ENST00000302279 ABCC9O60706 1549 aa43.56■■■■■ 4.56
FNTA-201ENST00000302279 SHROOM4Q9ULL8 1493 aa43.51■■■■■ 4.55
FNTA-201ENST00000302279 MYO15BQ96JP2 1530 aa43.4■■■■■ 4.54
FNTA-201ENST00000302279 NACADO15069 1562 aa43.06■■■■■ 4.48
FNTA-201ENST00000302279 RB1CC1Q8TDY2 1594 aa42.64■■■■■ 4.42
FNTA-201ENST00000302279 SCRIBQ14160 1630 aa42.61■■■■■ 4.41
FNTA-201ENST00000302279 SUPT5HO00267 1087 aaKnown RBP41.93■■■■■ 4.3
FNTA-201ENST00000302279 UNC13AQ9UPW8 1703 aa41.83■■■■■ 4.29
FNTA-201ENST00000302279 BICRAQ9NZM4 1560 aa41.38■■■■■ 4.22
FNTA-201ENST00000302279 RSF1Q96T23 1441 aaPredicted RBP41.34■■■■■ 4.21
FNTA-201ENST00000302279 CECR2Q9BXF3 1484 aa41.32■■■■■ 4.21
FNTA-201ENST00000302279 MROH2BQ7Z745 1585 aa41.12■■■■■ 4.17
FNTA-201ENST00000302279 PABPN1Q86U42 306 aaKnown RBP eCLIP41.09■■■■■ 4.17
FNTA-201ENST00000302279 BAZ1AQ9NRL2 1556 aaPredicted RBP41.06■■■■■ 4.16
FNTA-201ENST00000302279 SMARCA4P51532 1647 aa40.87■■■■■ 4.13
FNTA-201ENST00000302279 WIZO95785 1651 aa40.79■■■■■ 4.12
FNTA-201ENST00000302279 TOP2AP11388 1531 aaKnown RBP40.38■■■■■ 4.06
FNTA-201ENST00000302279 PEG3Q9GZU2 1588 aa40.37■■■■■ 4.05
FNTA-201ENST00000302279 CHIC1Q5VXU3 224 aa40.28■■■■■ 4.04
FNTA-201ENST00000302279 ATAD2BQ9ULI0 1458 aa40.12■■■■■ 4.01
FNTA-201ENST00000302279 SMARCA2P51531 1590 aa40.11■■■■■ 4.01
FNTA-201ENST00000302279 EIF4G1Q04637 1599 aaKnown RBP40.1■■■■■ 4.01
FNTA-201ENST00000302279 CCDC88BA6NC98 1476 aa39.95■■■■□ 3.99
FNTA-201ENST00000302279 BAZ1BQ9UIG0 1483 aaKnown RBP39.9■■■■□ 3.98
FNTA-201ENST00000302279 NCAPD3P42695 1498 aa39.74■■■■□ 3.95
FNTA-201ENST00000302279 HMGXB3Q12766 1538 aa39.72■■■■□ 3.95
FNTA-201ENST00000302279 CC2D2AQ9P2K1 1620 aa39.45■■■■□ 3.91
FNTA-201ENST00000302279 TRIM41Q8WV44 630 aa39.41■■■■□ 3.9
FNTA-201ENST00000302279 ABCC8Q09428 1581 aa39.19■■■■□ 3.86
FNTA-201ENST00000302279 CFTRP13569 1480 aa38.92■■■■□ 3.82
FNTA-201ENST00000302279 WRNQ14191 1432 aaPredicted RBP eCLIP38.91■■■■□ 3.82
FNTA-201ENST00000302279 PRDM2Q13029 1718 aa38.77■■■■□ 3.8
FNTA-201ENST00000302279 SYNJ1O43426 1573 aa38.76■■■■□ 3.8
FNTA-201ENST00000302279 LOC105371045A0A1W2PR82 267 aa38.73■■■■□ 3.79
FNTA-201ENST00000302279 CADPSQ9ULU8 1353 aa38.71■■■■□ 3.79
FNTA-201ENST00000302279 FAM9AQ8IZU1 332 aaPredicted RBP38.69■■■■□ 3.78
FNTA-201ENST00000302279 TOP2BQ02880 1626 aa38.58■■■■□ 3.77
FNTA-201ENST00000302279 BIVM-ERCC5R4GMW8 1640 aa38.56■■■■□ 3.76
FNTA-201ENST00000302279 SOGA1O94964 1423 aa38.48■■■■□ 3.75
FNTA-201ENST00000302279 EEA1Q15075 1411 aa38.46■■■■□ 3.75
FNTA-201ENST00000302279 CUX1P39880 1505 aa38.44■■■■□ 3.74
FNTA-201ENST00000302279 LAMC3Q9Y6N6 1575 aa38.36■■■■□ 3.73
FNTA-201ENST00000302279 DNAJC5BQ9UF47 199 aa38.35■■■■□ 3.73
FNTA-201ENST00000302279 RUSC2Q8N2Y8 1516 aa38.33■■■■□ 3.73
FNTA-201ENST00000302279 NESP48681 1621 aa38.33■■■■□ 3.73
FNTA-201ENST00000302279 FANCD2Q9BXW9 1451 aa38.31■■■■□ 3.72
FNTA-201ENST00000302279 CSRNP3Q8WYN3 585 aa38.19■■■■□ 3.7
FNTA-201ENST00000302279 EHMT2Q96KQ7 1210 aa38.12■■■■□ 3.69
FNTA-201ENST00000302279 CEP164Q9UPV0 1460 aa38.05■■■■□ 3.68
FNTA-201ENST00000302279 PDS5BQ9NTI5 1447 aa38.02■■■■□ 3.68
FNTA-201ENST00000302279 DNMBPQ6XZF7 1577 aa38.02■■■■□ 3.68
FNTA-201ENST00000302279 KIF21BO75037 1637 aa37.98■■■■□ 3.67
FNTA-201ENST00000302279 FGD5Q6ZNL6 1462 aa37.97■■■■□ 3.67
FNTA-201ENST00000302279 GOLGA3Q08378 1498 aa37.94■■■■□ 3.66
FNTA-201ENST00000302279 TOPBP1Q92547 1522 aa37.93■■■■□ 3.66
FNTA-201ENST00000302279 KIF27Q86VH2 1401 aa37.89■■■■□ 3.66
FNTA-201ENST00000302279 KIF21AQ7Z4S6 1674 aa37.89■■■■□ 3.66
FNTA-201ENST00000302279 TNIKQ9UKE5 1360 aa37.85■■■■□ 3.65
FNTA-201ENST00000302279 URB2Q14146 1524 aaKnown RBP37.84■■■■□ 3.65
FNTA-201ENST00000302279 POLA1P09884 1462 aaPredicted RBP37.76■■■■□ 3.64
FNTA-201ENST00000302279 CUX2O14529 1486 aa37.76■■■■□ 3.63
FNTA-201ENST00000302279 PRXQ9BXM0 1461 aa37.71■■■■□ 3.63
FNTA-201ENST00000302279 RAPGEF2Q9Y4G8 1499 aa37.7■■■■□ 3.63
FNTA-201ENST00000302279 UBTFP17480 764 aaKnown RBP37.69■■■■□ 3.62
FNTA-201ENST00000302279 CEP162Q5TB80 1403 aa37.68■■■■□ 3.62
FNTA-201ENST00000302279 ERICH3Q5RHP9 1530 aa37.68■■■■□ 3.62
FNTA-201ENST00000302279 ABCA10Q8WWZ4 1543 aa37.65■■■■□ 3.62
FNTA-201ENST00000302279 RAD54L2Q9Y4B4 1467 aa37.63■■■■□ 3.61
FNTA-201ENST00000302279 MRC2Q9UBG0 1479 aa37.56■■■■□ 3.6
FNTA-201ENST00000302279 WDR97A6NE52 1622 aa37.54■■■■□ 3.6
FNTA-201ENST00000302279 IGF1RP08069 1367 aa37.53■■■■□ 3.6
FNTA-201ENST00000302279 WDR62O43379 1518 aa37.37■■■■□ 3.57
FNTA-201ENST00000302279 TARBP1Q13395 1621 aaKnown RBP37.36■■■■□ 3.57
FNTA-201ENST00000302279 ABCA5Q8WWZ7 1642 aa37.35■■■■□ 3.57
FNTA-201ENST00000302279 CARMIL1Q5VZK9 1371 aa37.34■■■■□ 3.57
FNTA-201ENST00000302279 CLIP1P30622 1438 aa37.33■■■■□ 3.57
FNTA-201ENST00000302279 ERCC6Q03468 1493 aa37.32■■■■□ 3.56
FNTA-201ENST00000302279 CUL7Q14999 1698 aa37.26■■■■□ 3.56
FNTA-201ENST00000302279 THOC2Q8NI27 1593 aaKnown RBP37.23■■■■□ 3.55
FNTA-201ENST00000302279 GAPVD1Q14C86 1478 aa37.22■■■■□ 3.55
FNTA-201ENST00000302279 TDRD9Q8NDG6 1382 aaKnown RBP37.22■■■■□ 3.55
FNTA-201ENST00000302279 PCGF6Q9BYE7 350 aa37.15■■■■□ 3.54
FNTA-201ENST00000302279 TRIM26Q12899 539 aaPredicted RBP37.13■■■■□ 3.53
FNTA-201ENST00000302279 IFT140Q96RY7 1462 aa37.12■■■■□ 3.53
FNTA-201ENST00000302279 VPS8Q8N3P4 1428 aa37.04■■■■□ 3.52
FNTA-201ENST00000302279 PBRM1Q86U86 1689 aa37.03■■■■□ 3.52
FNTA-201ENST00000302279 RANGAP1P46060 587 aaPredicted RBP37.01■■■■□ 3.51
FNTA-201ENST00000302279 ARAP1Q96P48 1450 aa36.97■■■■□ 3.51
FNTA-201ENST00000302279 AQRO60306 1485 aaKnown RBP eCLIP36.96■■■■□ 3.519e-7■■■□□ 18.2
FNTA-201ENST00000302279 ZNF608Q9ULD9 1512 aaPredicted RBP36.92■■■■□ 3.5
FNTA-201ENST00000302279 ARHGAP35Q9NRY4 1499 aa36.92■■■■□ 3.5
FNTA-201ENST00000302279 GRIN2BQ13224 1484 aa36.89■■■■□ 3.5
FNTA-201ENST00000302279 CTTNBP2Q8WZ74 1663 aa36.89■■■■□ 3.5
FNTA-201ENST00000302279 PPARGC1BQ86YN6 1023 aaKnown RBP36.87■■■■□ 3.49
FNTA-201ENST00000302279 ADAMTS12P58397 1594 aa36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms