RNA–Protein interactions for RNA: ENST00000370664.3

UBTD1-201, Transcript of ubiquitin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBTD1, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTD1-201ENST00000370664 NISCHQ9Y2I1 1504 aa53■■■■■ 6.08
UBTD1-201ENST00000370664 CCDC180Q9P1Z9 1646 aa46.14■■■■■ 4.98
UBTD1-201ENST00000370664 ZCCHC6Q5VYS8 1495 aaKnown RBP44.54■■■■■ 4.72
UBTD1-201ENST00000370664 DCAF1Q9Y4B6 1507 aa43.83■■■■■ 4.61
UBTD1-201ENST00000370664 DCAF8L2P0C7V8 631 aa43.77■■■■■ 4.6
UBTD1-201ENST00000370664 ABCC9O60706 1549 aa43.54■■■■■ 4.56
UBTD1-201ENST00000370664 SHROOM4Q9ULL8 1493 aa43.35■■■■■ 4.53
UBTD1-201ENST00000370664 MYO15BQ96JP2 1530 aa43.26■■■■■ 4.52
UBTD1-201ENST00000370664 NACADO15069 1562 aa42.96■■■■■ 4.47
UBTD1-201ENST00000370664 RB1CC1Q8TDY2 1594 aa42.56■■■■■ 4.4
UBTD1-201ENST00000370664 SCRIBQ14160 1630 aa42.47■■■■■ 4.39
UBTD1-201ENST00000370664 SUPT5HO00267 1087 aaKnown RBP41.8■■■■■ 4.28
UBTD1-201ENST00000370664 UNC13AQ9UPW8 1703 aa41.67■■■■■ 4.26
UBTD1-201ENST00000370664 BICRAQ9NZM4 1560 aa41.26■■■■■ 4.2
UBTD1-201ENST00000370664 CECR2Q9BXF3 1484 aa41.18■■■■■ 4.18
UBTD1-201ENST00000370664 RSF1Q96T23 1441 aaPredicted RBP41.17■■■■■ 4.18
UBTD1-201ENST00000370664 PABPN1Q86U42 306 aaKnown RBP eCLIP41.1■■■■■ 4.17
UBTD1-201ENST00000370664 MROH2BQ7Z745 1585 aa40.96■■■■■ 4.15
UBTD1-201ENST00000370664 BAZ1AQ9NRL2 1556 aaPredicted RBP40.91■■■■■ 4.14
UBTD1-201ENST00000370664 SMARCA4P51532 1647 aa40.71■■■■■ 4.11
UBTD1-201ENST00000370664 WIZO95785 1651 aa40.62■■■■■ 4.09
UBTD1-201ENST00000370664 TOP2AP11388 1531 aaKnown RBP40.21■■■■■ 4.03
UBTD1-201ENST00000370664 PEG3Q9GZU2 1588 aa40.2■■■■■ 4.03
UBTD1-201ENST00000370664 CHIC1Q5VXU3 224 aa40.08■■■■■ 4.01
UBTD1-201ENST00000370664 ATAD2BQ9ULI0 1458 aa40.02■■■■■ 4
UBTD1-201ENST00000370664 EIF4G1Q04637 1599 aaKnown RBP40.01■■■■■ 4
UBTD1-201ENST00000370664 SMARCA2P51531 1590 aa40.01■■■■□ 3.99
UBTD1-201ENST00000370664 CCDC88BA6NC98 1476 aa39.82■■■■□ 3.96
UBTD1-201ENST00000370664 BAZ1BQ9UIG0 1483 aaKnown RBP39.81■■■■□ 3.96
UBTD1-201ENST00000370664 NCAPD3P42695 1498 aa39.65■■■■□ 3.94
UBTD1-201ENST00000370664 HMGXB3Q12766 1538 aa39.61■■■■□ 3.93
UBTD1-201ENST00000370664 CC2D2AQ9P2K1 1620 aa39.39■■■■□ 3.9
UBTD1-201ENST00000370664 TRIM41Q8WV44 630 aa39.29■■■■□ 3.88
UBTD1-201ENST00000370664 ABCC8Q09428 1581 aa39.01■■■■□ 3.83
UBTD1-201ENST00000370664 CFTRP13569 1480 aa38.81■■■■□ 3.8
UBTD1-201ENST00000370664 WRNQ14191 1432 aaPredicted RBP eCLIP38.76■■■■□ 3.8
UBTD1-201ENST00000370664 CADPSQ9ULU8 1353 aa38.66■■■■□ 3.78
UBTD1-201ENST00000370664 PRDM2Q13029 1718 aa38.59■■■■□ 3.77
UBTD1-201ENST00000370664 SYNJ1O43426 1573 aa38.58■■■■□ 3.77
UBTD1-201ENST00000370664 FAM9AQ8IZU1 332 aaPredicted RBP38.57■■■■□ 3.76
UBTD1-201ENST00000370664 LOC105371045A0A1W2PR82 267 aa38.55■■■■□ 3.76
UBTD1-201ENST00000370664 TOP2BQ02880 1626 aa38.41■■■■□ 3.74
UBTD1-201ENST00000370664 BIVM-ERCC5R4GMW8 1640 aa38.37■■■■□ 3.73
UBTD1-201ENST00000370664 DNAJC5BQ9UF47 199 aa38.35■■■■□ 3.73
UBTD1-201ENST00000370664 SOGA1O94964 1423 aa38.32■■■■□ 3.72
UBTD1-201ENST00000370664 EEA1Q15075 1411 aa38.29■■■■□ 3.72
UBTD1-201ENST00000370664 CUX1P39880 1505 aa38.29■■■■□ 3.72
UBTD1-201ENST00000370664 LAMC3Q9Y6N6 1575 aa38.28■■■■□ 3.72
UBTD1-201ENST00000370664 NESP48681 1621 aa38.26■■■■□ 3.72
UBTD1-201ENST00000370664 FANCD2Q9BXW9 1451 aa38.23■■■■□ 3.71
UBTD1-201ENST00000370664 RUSC2Q8N2Y8 1516 aa38.16■■■■□ 3.7
UBTD1-201ENST00000370664 CSRNP3Q8WYN3 585 aa38.08■■■■□ 3.69
UBTD1-201ENST00000370664 EHMT2Q96KQ7 1210 aa38.02■■■■□ 3.68
UBTD1-201ENST00000370664 PDS5BQ9NTI5 1447 aa38■■■■□ 3.67
UBTD1-201ENST00000370664 CEP164Q9UPV0 1460 aa37.98■■■■□ 3.67
UBTD1-201ENST00000370664 DNMBPQ6XZF7 1577 aa37.91■■■■□ 3.66
UBTD1-201ENST00000370664 FGD5Q6ZNL6 1462 aa37.85■■■■□ 3.65
UBTD1-201ENST00000370664 TOPBP1Q92547 1522 aa37.83■■■■□ 3.65
UBTD1-201ENST00000370664 KIF21AQ7Z4S6 1674 aa37.79■■■■□ 3.64
UBTD1-201ENST00000370664 KIF27Q86VH2 1401 aa37.78■■■■□ 3.64
UBTD1-201ENST00000370664 GOLGA3Q08378 1498 aa37.77■■■■□ 3.64
UBTD1-201ENST00000370664 KIF21BO75037 1637 aa37.77■■■■□ 3.64
UBTD1-201ENST00000370664 URB2Q14146 1524 aaKnown RBP37.74■■■■□ 3.63
UBTD1-201ENST00000370664 TNIKQ9UKE5 1360 aa37.68■■■■□ 3.62
UBTD1-201ENST00000370664 POLA1P09884 1462 aaPredicted RBP37.65■■■■□ 3.62
UBTD1-201ENST00000370664 CUX2O14529 1486 aa37.64■■■■□ 3.62
UBTD1-201ENST00000370664 UBTFP17480 764 aaKnown RBP37.61■■■■□ 3.61
UBTD1-201ENST00000370664 PRXQ9BXM0 1461 aa37.54■■■■□ 3.6
UBTD1-201ENST00000370664 RAD54L2Q9Y4B4 1467 aa37.54■■■■□ 3.6
UBTD1-201ENST00000370664 RAPGEF2Q9Y4G8 1499 aa37.53■■■■□ 3.6
UBTD1-201ENST00000370664 ABCA10Q8WWZ4 1543 aa37.53■■■■□ 3.6
UBTD1-201ENST00000370664 ERICH3Q5RHP9 1530 aa37.49■■■■□ 3.59
UBTD1-201ENST00000370664 MRC2Q9UBG0 1479 aa37.49■■■■□ 3.59
UBTD1-201ENST00000370664 CEP162Q5TB80 1403 aa37.48■■■■□ 3.59
UBTD1-201ENST00000370664 IGF1RP08069 1367 aa37.43■■■■□ 3.58
UBTD1-201ENST00000370664 WDR97A6NE52 1622 aa37.37■■■■□ 3.57
UBTD1-201ENST00000370664 ERCC6Q03468 1493 aa37.33■■■■□ 3.57
UBTD1-201ENST00000370664 WDR62O43379 1518 aa37.28■■■■□ 3.56
UBTD1-201ENST00000370664 CARMIL1Q5VZK9 1371 aa37.25■■■■□ 3.55
UBTD1-201ENST00000370664 TARBP1Q13395 1621 aaKnown RBP37.24■■■■□ 3.55
UBTD1-201ENST00000370664 ABCA5Q8WWZ7 1642 aa37.19■■■■□ 3.54
UBTD1-201ENST00000370664 TDRD9Q8NDG6 1382 aaKnown RBP37.17■■■■□ 3.54
UBTD1-201ENST00000370664 CLIP1P30622 1438 aa37.17■■■■□ 3.54
UBTD1-201ENST00000370664 GAPVD1Q14C86 1478 aa37.13■■■■□ 3.53
UBTD1-201ENST00000370664 THOC2Q8NI27 1593 aaKnown RBP37.13■■■■□ 3.53
UBTD1-201ENST00000370664 CUL7Q14999 1698 aa37.12■■■■□ 3.53
UBTD1-201ENST00000370664 IFT140Q96RY7 1462 aa37.06■■■■□ 3.52
UBTD1-201ENST00000370664 RANGAP1P46060 587 aaPredicted RBP36.95■■■■□ 3.51
UBTD1-201ENST00000370664 PCGF6Q9BYE7 350 aa36.92■■■■□ 3.5
UBTD1-201ENST00000370664 TRIM26Q12899 539 aaPredicted RBP36.91■■■■□ 3.5
UBTD1-201ENST00000370664 AQRO60306 1485 aaKnown RBP eCLIP36.9■■■■□ 3.5
UBTD1-201ENST00000370664 PBRM1Q86U86 1689 aa36.89■■■■□ 3.5
UBTD1-201ENST00000370664 VPS8Q8N3P4 1428 aa36.85■■■■□ 3.49
UBTD1-201ENST00000370664 ZNF608Q9ULD9 1512 aaPredicted RBP36.84■■■■□ 3.49
UBTD1-201ENST00000370664 GRIN2BQ13224 1484 aa36.83■■■■□ 3.49
UBTD1-201ENST00000370664 ARAP1Q96P48 1450 aa36.77■■■■□ 3.48
UBTD1-201ENST00000370664 FHAD1B1AJZ9 1412 aa36.74■■■■□ 3.47
UBTD1-201ENST00000370664 ARHGAP35Q9NRY4 1499 aa36.74■■■■□ 3.47
UBTD1-201ENST00000370664 PPARGC1BQ86YN6 1023 aaKnown RBP36.73■■■■□ 3.47
UBTD1-201ENST00000370664 CTTNBP2Q8WZ74 1663 aa36.71■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms