Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CSMD1Q96PZ7 AL139393.2-201ENST00000608721 2025 ntBASIC20.52■□□□□ 0.88
CSMD1Q96PZ7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSMD1Q96PZ7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.52■□□□□ 0.88
CSMD1Q96PZ7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.52■□□□□ 0.88
CSMD1Q96PZ7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
CSMD1Q96PZ7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSMD1Q96PZ7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.51■□□□□ 0.87
CSMD1Q96PZ7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSMD1Q96PZ7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CSMD1Q96PZ7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSMD1Q96PZ7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.51■□□□□ 0.87
CSMD1Q96PZ7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSMD1Q96PZ7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSMD1Q96PZ7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.51■□□□□ 0.87
CSMD1Q96PZ7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.5■□□□□ 0.87
CSMD1Q96PZ7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSMD1Q96PZ7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.5■□□□□ 0.87
CSMD1Q96PZ7 AC024257.2-201ENST00000549699 147 ntBASIC20.5■□□□□ 0.87
CSMD1Q96PZ7 UNC93B3-201ENST00000308076 687 ntBASIC20.49■□□□□ 0.87
CSMD1Q96PZ7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.49■□□□□ 0.87
CSMD1Q96PZ7 AL356740.2-201ENST00000601559 647 ntBASIC20.49■□□□□ 0.87
CSMD1Q96PZ7 MIR939-201ENST00000401314 82 ntBASIC20.48■□□□□ 0.87
CSMD1Q96PZ7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
CSMD1Q96PZ7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSMD1Q96PZ7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSMD1Q96PZ7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSMD1Q96PZ7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CSMD1Q96PZ7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CSMD1Q96PZ7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSMD1Q96PZ7 AL136967.2-201ENST00000623968 743 ntBASIC20.46■□□□□ 0.87
CSMD1Q96PZ7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CSMD1Q96PZ7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CSMD1Q96PZ7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CSMD1Q96PZ7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.46■□□□□ 0.87
CSMD1Q96PZ7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.46■□□□□ 0.87
CSMD1Q96PZ7 MTDHP2-201ENST00000601468 714 ntBASIC20.46■□□□□ 0.87
CSMD1Q96PZ7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.45■□□□□ 0.86
CSMD1Q96PZ7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSMD1Q96PZ7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.45■□□□□ 0.86
CSMD1Q96PZ7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSMD1Q96PZ7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.45■□□□□ 0.86
CSMD1Q96PZ7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSMD1Q96PZ7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSMD1Q96PZ7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSMD1Q96PZ7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.45■□□□□ 0.86
CSMD1Q96PZ7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSMD1Q96PZ7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSMD1Q96PZ7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSMD1Q96PZ7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CSMD1Q96PZ7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSMD1Q96PZ7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSMD1Q96PZ7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.44■□□□□ 0.86
CSMD1Q96PZ7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.44■□□□□ 0.86
CSMD1Q96PZ7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CSMD1Q96PZ7 MIR4281-201ENST00000580852 62 ntBASIC20.44■□□□□ 0.86
CSMD1Q96PZ7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSMD1Q96PZ7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSMD1Q96PZ7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CSMD1Q96PZ7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSMD1Q96PZ7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CSMD1Q96PZ7 EDA-201ENST00000338901 1233 ntBASIC20.43■□□□□ 0.86
CSMD1Q96PZ7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CSMD1Q96PZ7 IKBKGP1-201ENST00000612193 1073 ntBASIC20.43■□□□□ 0.86
CSMD1Q96PZ7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSMD1Q96PZ7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSMD1Q96PZ7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSMD1Q96PZ7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CSMD1Q96PZ7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSMD1Q96PZ7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSMD1Q96PZ7 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.41■□□□□ 0.86
CSMD1Q96PZ7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.41■□□□□ 0.86
CSMD1Q96PZ7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CSMD1Q96PZ7 AC092437.1-201ENST00000624794 1048 ntBASIC20.41■□□□□ 0.86
CSMD1Q96PZ7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CSMD1Q96PZ7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSMD1Q96PZ7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSMD1Q96PZ7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CSMD1Q96PZ7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.41■□□□□ 0.86
CSMD1Q96PZ7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.41■□□□□ 0.86
CSMD1Q96PZ7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CSMD1Q96PZ7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CSMD1Q96PZ7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.4■□□□□ 0.86
CSMD1Q96PZ7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSMD1Q96PZ7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSMD1Q96PZ7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSMD1Q96PZ7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CSMD1Q96PZ7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSMD1Q96PZ7 ID1-201ENST00000376105 1233 ntBASIC20.39■□□□□ 0.85
CSMD1Q96PZ7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CSMD1Q96PZ7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
CSMD1Q96PZ7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.39■□□□□ 0.85
CSMD1Q96PZ7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSMD1Q96PZ7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CSMD1Q96PZ7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSMD1Q96PZ7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CSMD1Q96PZ7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSMD1Q96PZ7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CSMD1Q96PZ7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSMD1Q96PZ7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms