RNA–Protein interactions for RNA: ENST00000592202.5

RBM42-206, Transcript of RNA binding motif protein 42, humanhuman

TSL 5 BASIC

Gene RBM42, Length 1,469 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-206ENST00000592202 NISCHQ9Y2I1 1504 aa56.21■■■■■ 6.59
RBM42-206ENST00000592202 CCDC180Q9P1Z9 1646 aa49.99■■■■■ 5.59
RBM42-206ENST00000592202 ABCC9O60706 1549 aa49.09■■■■■ 5.45
RBM42-206ENST00000592202 RB1CC1Q8TDY2 1594 aa47.14■■■■■ 5.14
RBM42-206ENST00000592202 DCAF8L2P0C7V8 631 aa47.13■■■■■ 5.13
RBM42-206ENST00000592202 NACADO15069 1562 aa47.06■■■■■ 5.12
RBM42-206ENST00000592202 ZCCHC6Q5VYS8 1495 aaKnown RBP46.76■■■■■ 5.08
RBM42-206ENST00000592202 MYO15BQ96JP2 1530 aa46.73■■■■■ 5.07
RBM42-206ENST00000592202 DCAF1Q9Y4B6 1507 aa46.48■■■■■ 5.03
RBM42-206ENST00000592202 UNC13AQ9UPW8 1703 aa46.09■■■■■ 4.97
RBM42-206ENST00000592202 PABPN1Q86U42 306 aaKnown RBP eCLIP45.89■■■■■ 4.94
RBM42-206ENST00000592202 BICRAQ9NZM4 1560 aa45.73■■■■■ 4.91
RBM42-206ENST00000592202 SCRIBQ14160 1630 aa45.62■■■■■ 4.89
RBM42-206ENST00000592202 DNAJC5BQ9UF47 199 aa45.23■■■■■ 4.83
RBM42-206ENST00000592202 SHROOM4Q9ULL8 1493 aa45.19■■■■■ 4.82
RBM42-206ENST00000592202 EIF4G1Q04637 1599 aaKnown RBP44.53■■■■■ 4.72
RBM42-206ENST00000592202 CC2D2AQ9P2K1 1620 aa44.39■■■■■ 4.7
RBM42-206ENST00000592202 CECR2Q9BXF3 1484 aa44.11■■■■■ 4.65
RBM42-206ENST00000592202 SMARCA4P51532 1647 aa43.62■■■■■ 4.57
RBM42-206ENST00000592202 BAZ1AQ9NRL2 1556 aaPredicted RBP43.57■■■■■ 4.56
RBM42-206ENST00000592202 NCAPD3P42695 1498 aa43.45■■■■■ 4.55
RBM42-206ENST00000592202 ATAD2BQ9ULI0 1458 aa43.44■■■■■ 4.54
RBM42-206ENST00000592202 SMARCA2P51531 1590 aa43.37■■■■■ 4.53
RBM42-206ENST00000592202 MROH2BQ7Z745 1585 aa43.32■■■■■ 4.53
RBM42-206ENST00000592202 PEG3Q9GZU2 1588 aa43.2■■■■■ 4.51
RBM42-206ENST00000592202 HMGXB3Q12766 1538 aa43.17■■■■■ 4.5
RBM42-206ENST00000592202 BAZ1BQ9UIG0 1483 aaKnown RBP43.07■■■■■ 4.49
RBM42-206ENST00000592202 WIZO95785 1651 aa42.85■■■■■ 4.45
RBM42-206ENST00000592202 RSF1Q96T23 1441 aaPredicted RBP42.79■■■■■ 4.44
RBM42-206ENST00000592202 NESP48681 1621 aa42.45■■■■■ 4.39
RBM42-206ENST00000592202 TOP2AP11388 1531 aaKnown RBP42.36■■■■■ 4.37
RBM42-206ENST00000592202 ERCC6Q03468 1493 aa42.31■■■■■ 4.36
RBM42-206ENST00000592202 LAMC3Q9Y6N6 1575 aa42.3■■■■■ 4.36
RBM42-206ENST00000592202 CADPSQ9ULU8 1353 aa42.19■■■■■ 4.34
RBM42-206ENST00000592202 PDS5BQ9NTI5 1447 aa42.04■■■■■ 4.32
RBM42-206ENST00000592202 KIF21AQ7Z4S6 1674 aa41.92■■■■■ 4.3
RBM42-206ENST00000592202 CCDC88BA6NC98 1476 aa41.9■■■■■ 4.3
RBM42-206ENST00000592202 CUX2O14529 1486 aa41.9■■■■■ 4.3
RBM42-206ENST00000592202 CFTRP13569 1480 aa41.89■■■■■ 4.3
RBM42-206ENST00000592202 THOC2Q8NI27 1593 aaKnown RBP41.78■■■■■ 4.28
RBM42-206ENST00000592202 FANCD2Q9BXW9 1451 aa41.68■■■■■ 4.26
RBM42-206ENST00000592202 SUPT5HO00267 1087 aaKnown RBP41.67■■■■■ 4.26
RBM42-206ENST00000592202 CEP164Q9UPV0 1460 aa41.63■■■■■ 4.26
RBM42-206ENST00000592202 MRC2Q9UBG0 1479 aa41.59■■■■■ 4.25
RBM42-206ENST00000592202 PRDM2Q13029 1718 aa41.54■■■■■ 4.24
RBM42-206ENST00000592202 WDR62O43379 1518 aa41.45■■■■■ 4.23
RBM42-206ENST00000592202 URB2Q14146 1524 aaKnown RBP41.27■■■■■ 4.2
RBM42-206ENST00000592202 ABCC8Q09428 1581 aa41.01■■■■■ 4.15
RBM42-206ENST00000592202 TOPBP1Q92547 1522 aa41■■■■■ 4.15
RBM42-206ENST00000592202 DNMBPQ6XZF7 1577 aa40.92■■■■■ 4.14
RBM42-206ENST00000592202 DNAJC5Q9H3Z4 198 aa40.84■■■■■ 4.13
RBM42-206ENST00000592202 IFT140Q96RY7 1462 aa40.77■■■■■ 4.12
RBM42-206ENST00000592202 POLA1P09884 1462 aaPredicted RBP40.64■■■■■ 4.1
RBM42-206ENST00000592202 CUX1P39880 1505 aa40.64■■■■■ 4.1
RBM42-206ENST00000592202 ZNF608Q9ULD9 1512 aaPredicted RBP40.61■■■■■ 4.09
RBM42-206ENST00000592202 TARBP1Q13395 1621 aaKnown RBP40.55■■■■■ 4.08
RBM42-206ENST00000592202 FGD5Q6ZNL6 1462 aa40.52■■■■■ 4.08
RBM42-206ENST00000592202 SOGA1O94964 1423 aa40.51■■■■■ 4.08
RBM42-206ENST00000592202 RAD54L2Q9Y4B4 1467 aa40.48■■■■■ 4.07
RBM42-206ENST00000592202 EIF4G3O43432 1585 aaKnown RBP40.4■■■■■ 4.06
RBM42-206ENST00000592202 AQRO60306 1485 aaKnown RBP eCLIP40.39■■■■■ 4.062e-6■■■□□ 18.2
RBM42-206ENST00000592202 WRNQ14191 1432 aaPredicted RBP eCLIP40.34■■■■■ 4.05
RBM42-206ENST00000592202 TDRD9Q8NDG6 1382 aaKnown RBP40.3■■■■■ 4.04
RBM42-206ENST00000592202 TOP2BQ02880 1626 aa40.25■■■■■ 4.03
RBM42-206ENST00000592202 BIVM-ERCC5R4GMW8 1640 aa40.25■■■■■ 4.03
RBM42-206ENST00000592202 OSCARQ8IYS5 282 aa40.23■■■■■ 4.03
RBM42-206ENST00000592202 SYNJ1O43426 1573 aa40.23■■■■■ 4.03
RBM42-206ENST00000592202 WDR97A6NE52 1622 aa40.2■■■■■ 4.03
RBM42-206ENST00000592202 ABCA10Q8WWZ4 1543 aa40.12■■■■■ 4.01
RBM42-206ENST00000592202 GRIN2BQ13224 1484 aa40.02■■■■■ 4
RBM42-206ENST00000592202 GAPVD1Q14C86 1478 aa40.02■■■■■ 4
RBM42-206ENST00000592202 FBLN2P98095 1184 aa39.97■■■■□ 3.99
RBM42-206ENST00000592202 SNAPC4Q5SXM2 1469 aa39.97■■■■□ 3.99
RBM42-206ENST00000592202 ABCA5Q8WWZ7 1642 aa39.95■■■■□ 3.99
RBM42-206ENST00000592202 CHD1O14646 1710 aa39.94■■■■□ 3.99
RBM42-206ENST00000592202 MAGI1Q96QZ7 1491 aaPredicted RBP39.92■■■■□ 3.98
RBM42-206ENST00000592202 PBRM1Q86U86 1689 aa39.91■■■■□ 3.98
RBM42-206ENST00000592202 CHMP7Q8WUX9 453 aaPredicted RBP39.83■■■■□ 3.97
RBM42-206ENST00000592202 SYNJ2O15056 1496 aa39.77■■■■□ 3.96
RBM42-206ENST00000592202 ERICH3Q5RHP9 1530 aa39.64■■■■□ 3.94
RBM42-206ENST00000592202 ADAMTS12P58397 1594 aa39.57■■■■□ 3.93
RBM42-206ENST00000592202 FHAD1B1AJZ9 1412 aa39.54■■■■□ 3.92
RBM42-206ENST00000592202 RIMBP3CA6NJZ7 1639 aa39.53■■■■□ 3.92
RBM42-206ENST00000592202 RIMBP3BA6NNM3 1639 aa39.53■■■■□ 3.92
RBM42-206ENST00000592202 RIMBP3Q9UFD9 1639 aa39.53■■■■□ 3.92
RBM42-206ENST00000592202 KIF27Q86VH2 1401 aa39.51■■■■□ 3.92
RBM42-206ENST00000592202 ARHGEF11O15085 1522 aa39.5■■■■□ 3.91
RBM42-206ENST00000592202 GRIN2AQ12879 1464 aa39.5■■■■□ 3.91
RBM42-206ENST00000592202 CLASP1Q7Z460 1538 aa39.49■■■■□ 3.91
RBM42-206ENST00000592202 TRIM41Q8WV44 630 aa39.44■■■■□ 3.9
RBM42-206ENST00000592202 IGF1RP08069 1367 aa39.4■■■■□ 3.9
RBM42-206ENST00000592202 NUP160Q12769 1436 aa39.33■■■■□ 3.89
RBM42-206ENST00000592202 CEP170Q5SW79 1584 aa39.3■■■■□ 3.88
RBM42-206ENST00000592202 CUL7Q14999 1698 aa39.24■■■■□ 3.87
RBM42-206ENST00000592202 CYB5RLQ6IPT4 315 aa39.23■■■■□ 3.87
RBM42-206ENST00000592202 ARAP1Q96P48 1450 aa39.17■■■■□ 3.86
RBM42-206ENST00000592202 CARMIL1Q5VZK9 1371 aa39.16■■■■□ 3.86
RBM42-206ENST00000592202 RUSC2Q8N2Y8 1516 aa39.14■■■■□ 3.86
RBM42-206ENST00000592202 SHROOM2Q13796 1616 aa39.03■■■■□ 3.84
RBM42-206ENST00000592202 JPH4Q96JJ6 628 aa39■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms