RNA–Protein interactions for RNA: ENST00000303204.8

PRELID1-201, Transcript of PRELI domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRELID1, Length 1,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRELID1-201ENST00000303204 NISCHQ9Y2I1 1504 aa56.49■■■■■ 6.63
PRELID1-201ENST00000303204 CCDC180Q9P1Z9 1646 aa50.09■■■■■ 5.61
PRELID1-201ENST00000303204 ABCC9O60706 1549 aa49.19■■■■■ 5.47
PRELID1-201ENST00000303204 DCAF8L2P0C7V8 631 aa47.53■■■■■ 5.2
PRELID1-201ENST00000303204 RB1CC1Q8TDY2 1594 aa47.24■■■■■ 5.15
PRELID1-201ENST00000303204 NACADO15069 1562 aa47.19■■■■■ 5.14
PRELID1-201ENST00000303204 ZCCHC6Q5VYS8 1495 aaKnown RBP47.01■■■■■ 5.12
PRELID1-201ENST00000303204 MYO15BQ96JP2 1530 aa46.85■■■■■ 5.09
PRELID1-201ENST00000303204 DCAF1Q9Y4B6 1507 aa46.67■■■■■ 5.06
PRELID1-201ENST00000303204 PABPN1Q86U42 306 aaKnown RBP eCLIP46.09■■■■■ 4.97
PRELID1-201ENST00000303204 UNC13AQ9UPW8 1703 aa46.06■■■■■ 4.96
PRELID1-201ENST00000303204 SCRIBQ14160 1630 aa45.81■■■■■ 4.92
PRELID1-201ENST00000303204 BICRAQ9NZM4 1560 aa45.75■■■■■ 4.92
PRELID1-201ENST00000303204 SHROOM4Q9ULL8 1493 aa45.24■■■■■ 4.83
PRELID1-201ENST00000303204 DNAJC5BQ9UF47 199 aa45.2■■■■■ 4.83
PRELID1-201ENST00000303204 EIF4G1Q04637 1599 aaKnown RBP44.59■■■■■ 4.73
PRELID1-201ENST00000303204 CC2D2AQ9P2K1 1620 aa44.42■■■■■ 4.7
PRELID1-201ENST00000303204 CECR2Q9BXF3 1484 aa44.18■■■■■ 4.66
PRELID1-201ENST00000303204 SMARCA4P51532 1647 aa43.78■■■■■ 4.6
PRELID1-201ENST00000303204 BAZ1AQ9NRL2 1556 aaPredicted RBP43.77■■■■■ 4.6
PRELID1-201ENST00000303204 ATAD2BQ9ULI0 1458 aa43.61■■■■■ 4.57
PRELID1-201ENST00000303204 NCAPD3P42695 1498 aa43.57■■■■■ 4.57
PRELID1-201ENST00000303204 MROH2BQ7Z745 1585 aa43.54■■■■■ 4.56
PRELID1-201ENST00000303204 SMARCA2P51531 1590 aa43.53■■■■■ 4.56
PRELID1-201ENST00000303204 PEG3Q9GZU2 1588 aa43.31■■■■■ 4.52
PRELID1-201ENST00000303204 HMGXB3Q12766 1538 aa43.28■■■■■ 4.52
PRELID1-201ENST00000303204 BAZ1BQ9UIG0 1483 aaKnown RBP43.26■■■■■ 4.52
PRELID1-201ENST00000303204 RSF1Q96T23 1441 aaPredicted RBP43.09■■■■■ 4.49
PRELID1-201ENST00000303204 WIZO95785 1651 aa43.06■■■■■ 4.48
PRELID1-201ENST00000303204 TOP2AP11388 1531 aaKnown RBP42.58■■■■■ 4.41
PRELID1-201ENST00000303204 NESP48681 1621 aa42.54■■■■■ 4.4
PRELID1-201ENST00000303204 ERCC6Q03468 1493 aa42.43■■■■■ 4.38
PRELID1-201ENST00000303204 LAMC3Q9Y6N6 1575 aa42.39■■■■■ 4.38
PRELID1-201ENST00000303204 CADPSQ9ULU8 1353 aa42.37■■■■■ 4.37
PRELID1-201ENST00000303204 SUPT5HO00267 1087 aaKnown RBP42.24■■■■■ 4.35
PRELID1-201ENST00000303204 PDS5BQ9NTI5 1447 aa42.2■■■■■ 4.35
PRELID1-201ENST00000303204 CCDC88BA6NC98 1476 aa42.17■■■■■ 4.34
PRELID1-201ENST00000303204 CFTRP13569 1480 aa42.05■■■■■ 4.32
PRELID1-201ENST00000303204 KIF21AQ7Z4S6 1674 aa41.95■■■■■ 4.31
PRELID1-201ENST00000303204 CUX2O14529 1486 aa41.87■■■■■ 4.29
PRELID1-201ENST00000303204 FANCD2Q9BXW9 1451 aa41.85■■■■■ 4.29
PRELID1-201ENST00000303204 CEP164Q9UPV0 1460 aa41.78■■■■■ 4.28
PRELID1-201ENST00000303204 THOC2Q8NI27 1593 aaKnown RBP41.76■■■■■ 4.28
PRELID1-201ENST00000303204 MRC2Q9UBG0 1479 aa41.7■■■■■ 4.27
PRELID1-201ENST00000303204 PRDM2Q13029 1718 aa41.59■■■■■ 4.25
PRELID1-201ENST00000303204 WDR62O43379 1518 aa41.49■■■■■ 4.23
PRELID1-201ENST00000303204 URB2Q14146 1524 aaKnown RBP41.39■■■■■ 4.22
PRELID1-201ENST00000303204 ABCC8Q09428 1581 aa41.19■■■■■ 4.18
PRELID1-201ENST00000303204 TOPBP1Q92547 1522 aa41.15■■■■■ 4.18
PRELID1-201ENST00000303204 DNMBPQ6XZF7 1577 aa41.08■■■■■ 4.17
PRELID1-201ENST00000303204 IFT140Q96RY7 1462 aa40.91■■■■■ 4.14
PRELID1-201ENST00000303204 CUX1P39880 1505 aa40.83■■■■■ 4.13
PRELID1-201ENST00000303204 POLA1P09884 1462 aaPredicted RBP40.8■■■■■ 4.12
PRELID1-201ENST00000303204 SOGA1O94964 1423 aa40.74■■■■■ 4.11
PRELID1-201ENST00000303204 ZNF608Q9ULD9 1512 aaPredicted RBP40.72■■■■■ 4.11
PRELID1-201ENST00000303204 FGD5Q6ZNL6 1462 aa40.72■■■■■ 4.11
PRELID1-201ENST00000303204 DNAJC5Q9H3Z4 198 aa40.71■■■■■ 4.11
PRELID1-201ENST00000303204 RAD54L2Q9Y4B4 1467 aa40.69■■■■■ 4.1
PRELID1-201ENST00000303204 WRNQ14191 1432 aaPredicted RBP eCLIP40.66■■■■■ 4.1
PRELID1-201ENST00000303204 TARBP1Q13395 1621 aaKnown RBP40.64■■■■■ 4.1
PRELID1-201ENST00000303204 AQRO60306 1485 aaKnown RBP eCLIP40.56■■■■■ 4.084e-8■■■■□ 24.1
PRELID1-201ENST00000303204 TDRD9Q8NDG6 1382 aaKnown RBP40.52■■■■■ 4.08
PRELID1-201ENST00000303204 EIF4G3O43432 1585 aaKnown RBP40.48■■■■■ 4.07
PRELID1-201ENST00000303204 TOP2BQ02880 1626 aa40.46■■■■■ 4.07
PRELID1-201ENST00000303204 SYNJ1O43426 1573 aa40.45■■■■■ 4.07
PRELID1-201ENST00000303204 BIVM-ERCC5R4GMW8 1640 aa40.42■■■■■ 4.06
PRELID1-201ENST00000303204 OSCARQ8IYS5 282 aa40.34■■■■■ 4.05
PRELID1-201ENST00000303204 ABCA10Q8WWZ4 1543 aa40.31■■■■■ 4.04
PRELID1-201ENST00000303204 WDR97A6NE52 1622 aa40.28■■■■■ 4.04
PRELID1-201ENST00000303204 FBLN2P98095 1184 aa40.23■■■■■ 4.03
PRELID1-201ENST00000303204 GAPVD1Q14C86 1478 aa40.22■■■■■ 4.03
PRELID1-201ENST00000303204 GRIN2BQ13224 1484 aa40.19■■■■■ 4.03
PRELID1-201ENST00000303204 SNAPC4Q5SXM2 1469 aa40.12■■■■■ 4.01
PRELID1-201ENST00000303204 CHMP7Q8WUX9 453 aaPredicted RBP40.08■■■■■ 4.01
PRELID1-201ENST00000303204 ABCA5Q8WWZ7 1642 aa40.06■■■■■ 4
PRELID1-201ENST00000303204 MAGI1Q96QZ7 1491 aaPredicted RBP40.05■■■■■ 4
PRELID1-201ENST00000303204 PBRM1Q86U86 1689 aa40■■■■□ 3.99
PRELID1-201ENST00000303204 CHD1O14646 1710 aa39.96■■■■□ 3.99
PRELID1-201ENST00000303204 SYNJ2O15056 1496 aa39.91■■■■□ 3.98
PRELID1-201ENST00000303204 TRIM41Q8WV44 630 aa39.88■■■■□ 3.97
PRELID1-201ENST00000303204 KIF27Q86VH2 1401 aa39.82■■■■□ 3.97
PRELID1-201ENST00000303204 ERICH3Q5RHP9 1530 aa39.81■■■■□ 3.96
PRELID1-201ENST00000303204 FHAD1B1AJZ9 1412 aa39.75■■■■□ 3.95
PRELID1-201ENST00000303204 ADAMTS12P58397 1594 aa39.69■■■■□ 3.94
PRELID1-201ENST00000303204 IGF1RP08069 1367 aa39.68■■■■□ 3.94
PRELID1-201ENST00000303204 GRIN2AQ12879 1464 aa39.65■■■■□ 3.94
PRELID1-201ENST00000303204 CLASP1Q7Z460 1538 aa39.53■■■■□ 3.92
PRELID1-201ENST00000303204 ARHGEF11O15085 1522 aa39.5■■■■□ 3.91
PRELID1-201ENST00000303204 RIMBP3CA6NJZ7 1639 aa39.48■■■■□ 3.91
PRELID1-201ENST00000303204 RIMBP3BA6NNM3 1639 aa39.48■■■■□ 3.91
PRELID1-201ENST00000303204 RIMBP3Q9UFD9 1639 aa39.48■■■■□ 3.91
PRELID1-201ENST00000303204 CARMIL1Q5VZK9 1371 aa39.46■■■■□ 3.91
PRELID1-201ENST00000303204 NUP160Q12769 1436 aa39.46■■■■□ 3.91
PRELID1-201ENST00000303204 RUSC2Q8N2Y8 1516 aa39.45■■■■□ 3.91
PRELID1-201ENST00000303204 CUL7Q14999 1698 aa39.42■■■■□ 3.9
PRELID1-201ENST00000303204 CEP170Q5SW79 1584 aa39.41■■■■□ 3.9
PRELID1-201ENST00000303204 CHIC1Q5VXU3 224 aa39.36■■■■□ 3.89
PRELID1-201ENST00000303204 CYB5RLQ6IPT4 315 aa39.35■■■■□ 3.89
PRELID1-201ENST00000303204 JPH4Q96JJ6 628 aa39.24■■■■□ 3.87
PRELID1-201ENST00000303204 ARAP1Q96P48 1450 aa39.18■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms