RNA–Protein interactions for RNA: ENST00000617774.1

HNRNPUL1-222, Transcript of heterogeneous nuclear ribonucleoprotein U like 1, human

TSL 5 BASIC

Gene HNRNPUL1, Length 451 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPUL1-222	ENST00000617774	NISCH	Q9Y2I1	1504 aa		56.47	■■■■■ 6.63
HNRNPUL1-222	ENST00000617774	CCDC180	Q9P1Z9	1646 aa		50.42	■■■■■ 5.66
HNRNPUL1-222	ENST00000617774	ABCC9	O60706	1549 aa		49.31	■■■■■ 5.48
HNRNPUL1-222	ENST00000617774	RB1CC1	Q8TDY2	1594 aa		47.45	■■■■■ 5.19
HNRNPUL1-222	ENST00000617774	NACAD	O15069	1562 aa		47.34	■■■■■ 5.17
HNRNPUL1-222	ENST00000617774	DCAF8L2	P0C7V8	631 aa		47.06	■■■■■ 5.12
HNRNPUL1-222	ENST00000617774	ZCCHC6	Q5VYS8	1495 aa	Known RBP	47.04	■■■■■ 5.12
HNRNPUL1-222	ENST00000617774	MYO15B	Q96JP2	1530 aa		47	■■■■■ 5.11
HNRNPUL1-222	ENST00000617774	DCAF1	Q9Y4B6	1507 aa		46.74	■■■■■ 5.07
HNRNPUL1-222	ENST00000617774	UNC13A	Q9UPW8	1703 aa		46.49	■■■■■ 5.03
HNRNPUL1-222	ENST00000617774	BICRA	Q9NZM4	1560 aa		46.01	■■■■■ 4.96
HNRNPUL1-222	ENST00000617774	PABPN1	Q86U42	306 aa	Known RBP eCLIP	45.94	■■■■■ 4.94
HNRNPUL1-222	ENST00000617774	SCRIB	Q14160	1630 aa		45.92	■■■■■ 4.94
HNRNPUL1-222	ENST00000617774	SHROOM4	Q9ULL8	1493 aa		45.55	■■■■■ 4.88
HNRNPUL1-222	ENST00000617774	DNAJC5B	Q9UF47	199 aa		45.25	■■■■■ 4.83
HNRNPUL1-222	ENST00000617774	EIF4G1	Q04637	1599 aa	Known RBP	44.8	■■■■■ 4.76
HNRNPUL1-222	ENST00000617774	CC2D2A	Q9P2K1	1620 aa		44.66	■■■■■ 4.74
HNRNPUL1-222	ENST00000617774	CECR2	Q9BXF3	1484 aa		44.33	■■■■■ 4.69
HNRNPUL1-222	ENST00000617774	SMARCA4	P51532	1647 aa		43.92	■■■■■ 4.62
HNRNPUL1-222	ENST00000617774	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	43.82	■■■■■ 4.61
HNRNPUL1-222	ENST00000617774	SMARCA2	P51531	1590 aa		43.63	■■■■■ 4.58
HNRNPUL1-222	ENST00000617774	ATAD2B	Q9ULI0	1458 aa		43.63	■■■■■ 4.57
HNRNPUL1-222	ENST00000617774	NCAPD3	P42695	1498 aa		43.6	■■■■■ 4.57
HNRNPUL1-222	ENST00000617774	MROH2B	Q7Z745	1585 aa		43.51	■■■■■ 4.56
HNRNPUL1-222	ENST00000617774	HMGXB3	Q12766	1538 aa		43.49	■■■■■ 4.55
HNRNPUL1-222	ENST00000617774	PEG3	Q9GZU2	1588 aa		43.48	■■■■■ 4.55
HNRNPUL1-222	ENST00000617774	BAZ1B	Q9UIG0	1483 aa	Known RBP	43.3	■■■■■ 4.52
HNRNPUL1-222	ENST00000617774	WIZ	O95785	1651 aa		43.09	■■■■■ 4.49
HNRNPUL1-222	ENST00000617774	RSF1	Q96T23	1441 aa	Predicted RBP	42.9	■■■■■ 4.46
HNRNPUL1-222	ENST00000617774	TOP2A	P11388	1531 aa	Known RBP	42.63	■■■■■ 4.42
HNRNPUL1-222	ENST00000617774	NES	P48681	1621 aa		42.63	■■■■■ 4.41
HNRNPUL1-222	ENST00000617774	LAMC3	Q9Y6N6	1575 aa		42.58	■■■■■ 4.41
HNRNPUL1-222	ENST00000617774	ERCC6	Q03468	1493 aa		42.55	■■■■■ 4.4
HNRNPUL1-222	ENST00000617774	CADPS	Q9ULU8	1353 aa		42.3	■■■■■ 4.36
HNRNPUL1-222	ENST00000617774	KIF21A	Q7Z4S6	1674 aa		42.27	■■■■■ 4.36
HNRNPUL1-222	ENST00000617774	PDS5B	Q9NTI5	1447 aa		42.2	■■■■■ 4.35
HNRNPUL1-222	ENST00000617774	CUX2	O14529	1486 aa		42.17	■■■■■ 4.34
HNRNPUL1-222	ENST00000617774	THOC2	Q8NI27	1593 aa	Known RBP	42.14	■■■■■ 4.34
HNRNPUL1-222	ENST00000617774	CFTR	P13569	1480 aa		42.06	■■■■■ 4.32
HNRNPUL1-222	ENST00000617774	CCDC88B	A6NC98	1476 aa		42.03	■■■■■ 4.32
HNRNPUL1-222	ENST00000617774	PRDM2	Q13029	1718 aa		41.98	■■■■■ 4.31
HNRNPUL1-222	ENST00000617774	FANCD2	Q9BXW9	1451 aa		41.88	■■■■■ 4.29
HNRNPUL1-222	ENST00000617774	CEP164	Q9UPV0	1460 aa		41.87	■■■■■ 4.29
HNRNPUL1-222	ENST00000617774	MRC2	Q9UBG0	1479 aa		41.84	■■■■■ 4.29
HNRNPUL1-222	ENST00000617774	WDR62	O43379	1518 aa		41.74	■■■■■ 4.27
HNRNPUL1-222	ENST00000617774	SUPT5H	O00267	1087 aa	Known RBP	41.63	■■■■■ 4.25
HNRNPUL1-222	ENST00000617774	URB2	Q14146	1524 aa	Known RBP	41.49	■■■■■ 4.23
HNRNPUL1-222	ENST00000617774	TOPBP1	Q92547	1522 aa		41.21	■■■■■ 4.19
HNRNPUL1-222	ENST00000617774	DNMBP	Q6XZF7	1577 aa		41.2	■■■■■ 4.19
HNRNPUL1-222	ENST00000617774	ABCC8	Q09428	1581 aa		41.18	■■■■■ 4.18
HNRNPUL1-222	ENST00000617774	IFT140	Q96RY7	1462 aa		40.98	■■■■■ 4.15
HNRNPUL1-222	ENST00000617774	DNAJC5	Q9H3Z4	198 aa		40.9	■■■■■ 4.14
HNRNPUL1-222	ENST00000617774	POLA1	P09884	1462 aa	Predicted RBP	40.84	■■■■■ 4.13
HNRNPUL1-222	ENST00000617774	CUX1	P39880	1505 aa		40.84	■■■■■ 4.13
HNRNPUL1-222	ENST00000617774	TARBP1	Q13395	1621 aa	Known RBP	40.82	■■■■■ 4.12
HNRNPUL1-222	ENST00000617774	ZNF608	Q9ULD9	1512 aa	Predicted RBP	40.78	■■■■■ 4.12
HNRNPUL1-222	ENST00000617774	EIF4G3	O43432	1585 aa	Known RBP	40.74	■■■■■ 4.11
HNRNPUL1-222	ENST00000617774	FGD5	Q6ZNL6	1462 aa		40.73	■■■■■ 4.11
HNRNPUL1-222	ENST00000617774	RAD54L2	Q9Y4B4	1467 aa		40.63	■■■■■ 4.09
HNRNPUL1-222	ENST00000617774	SOGA1	O94964	1423 aa		40.6	■■■■■ 4.09
HNRNPUL1-222	ENST00000617774	BIVM-ERCC5	R4GMW8	1640 aa		40.54	■■■■■ 4.08
HNRNPUL1-222	ENST00000617774	WDR97	A6NE52	1622 aa		40.53	■■■■■ 4.08
HNRNPUL1-222	ENST00000617774	WRN	Q14191	1432 aa	Predicted RBP eCLIP	40.5	■■■■■ 4.07
HNRNPUL1-222	ENST00000617774	TOP2B	Q02880	1626 aa		40.49	■■■■■ 4.07
HNRNPUL1-222	ENST00000617774	AQR	O60306	1485 aa	Known RBP eCLIP	40.49	■■■■■ 4.07	5e-7	■■■■■ 33
HNRNPUL1-222	ENST00000617774	SYNJ1	O43426	1573 aa		40.47	■■■■■ 4.07
HNRNPUL1-222	ENST00000617774	TDRD9	Q8NDG6	1382 aa	Known RBP	40.38	■■■■■ 4.06
HNRNPUL1-222	ENST00000617774	ABCA10	Q8WWZ4	1543 aa		40.32	■■■■■ 4.05
HNRNPUL1-222	ENST00000617774	CHD1	O14646	1710 aa		40.3	■■■■■ 4.04
HNRNPUL1-222	ENST00000617774	PBRM1	Q86U86	1689 aa		40.27	■■■■■ 4.04
HNRNPUL1-222	ENST00000617774	ABCA5	Q8WWZ7	1642 aa		40.26	■■■■■ 4.04
HNRNPUL1-222	ENST00000617774	OSCAR	Q8IYS5	282 aa		40.25	■■■■■ 4.03
HNRNPUL1-222	ENST00000617774	GRIN2B	Q13224	1484 aa		40.21	■■■■■ 4.03
HNRNPUL1-222	ENST00000617774	SNAPC4	Q5SXM2	1469 aa		40.19	■■■■■ 4.03
HNRNPUL1-222	ENST00000617774	GAPVD1	Q14C86	1478 aa		40.19	■■■■■ 4.02
HNRNPUL1-222	ENST00000617774	MAGI1	Q96QZ7	1491 aa	Predicted RBP	40.15	■■■■■ 4.02
HNRNPUL1-222	ENST00000617774	FBLN2	P98095	1184 aa		39.99	■■■■□ 3.99
HNRNPUL1-222	ENST00000617774	SYNJ2	O15056	1496 aa		39.97	■■■■□ 3.99
HNRNPUL1-222	ENST00000617774	ADAMTS12	P58397	1594 aa		39.89	■■■■□ 3.98
HNRNPUL1-222	ENST00000617774	CHMP7	Q8WUX9	453 aa	Predicted RBP	39.87	■■■■□ 3.97
HNRNPUL1-222	ENST00000617774	ERICH3	Q5RHP9	1530 aa		39.86	■■■■□ 3.97
HNRNPUL1-222	ENST00000617774	RIMBP3C	A6NJZ7	1639 aa		39.81	■■■■□ 3.96
HNRNPUL1-222	ENST00000617774	RIMBP3B	A6NNM3	1639 aa		39.81	■■■■□ 3.96
HNRNPUL1-222	ENST00000617774	RIMBP3	Q9UFD9	1639 aa		39.81	■■■■□ 3.96
HNRNPUL1-222	ENST00000617774	CLASP1	Q7Z460	1538 aa		39.77	■■■■□ 3.96
HNRNPUL1-222	ENST00000617774	ARHGEF11	O15085	1522 aa		39.74	■■■■□ 3.95
HNRNPUL1-222	ENST00000617774	GRIN2A	Q12879	1464 aa		39.71	■■■■□ 3.95
HNRNPUL1-222	ENST00000617774	FHAD1	B1AJZ9	1412 aa		39.71	■■■■□ 3.95
HNRNPUL1-222	ENST00000617774	KIF27	Q86VH2	1401 aa		39.65	■■■■□ 3.94
HNRNPUL1-222	ENST00000617774	CEP170	Q5SW79	1584 aa		39.55	■■■■□ 3.92
HNRNPUL1-222	ENST00000617774	CUL7	Q14999	1698 aa		39.54	■■■■□ 3.92
HNRNPUL1-222	ENST00000617774	NUP160	Q12769	1436 aa		39.52	■■■■□ 3.92
HNRNPUL1-222	ENST00000617774	TRIM41	Q8WV44	630 aa		39.52	■■■■□ 3.92
HNRNPUL1-222	ENST00000617774	IGF1R	P08069	1367 aa		39.43	■■■■□ 3.9
HNRNPUL1-222	ENST00000617774	ARAP1	Q96P48	1450 aa		39.41	■■■■□ 3.9
HNRNPUL1-222	ENST00000617774	SHROOM2	Q13796	1616 aa		39.32	■■■■□ 3.89
HNRNPUL1-222	ENST00000617774	RUSC2	Q8N2Y8	1516 aa		39.31	■■■■□ 3.88
HNRNPUL1-222	ENST00000617774	CARMIL1	Q5VZK9	1371 aa		39.23	■■■■□ 3.87
HNRNPUL1-222	ENST00000617774	CYB5RL	Q6IPT4	315 aa		39.23	■■■■□ 3.87
HNRNPUL1-222	ENST00000617774	ERCC6L2	Q5T890	1561 aa		39.18	■■■■□ 3.86

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms