RNA–Protein interactions for RNA: ENST00000334421.5

TRIM7-202, Transcript of tripartite motif containing 7, humanhuman

TSL 1 (best) BASIC

Gene TRIM7, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM7-202ENST00000334421 NISCHQ9Y2I1 1504 aa56.05■■■■■ 6.56
TRIM7-202ENST00000334421 CCDC180Q9P1Z9 1646 aa49.97■■■■■ 5.59
TRIM7-202ENST00000334421 ABCC9O60706 1549 aa48.81■■■■■ 5.4
TRIM7-202ENST00000334421 RB1CC1Q8TDY2 1594 aa47.03■■■■■ 5.12
TRIM7-202ENST00000334421 NACADO15069 1562 aa46.96■■■■■ 5.11
TRIM7-202ENST00000334421 MYO15BQ96JP2 1530 aa46.71■■■■■ 5.07
TRIM7-202ENST00000334421 ZCCHC6Q5VYS8 1495 aaKnown RBP46.7■■■■■ 5.07
TRIM7-202ENST00000334421 DCAF8L2P0C7V8 631 aa46.63■■■■■ 5.06
TRIM7-202ENST00000334421 DCAF1Q9Y4B6 1507 aa46.46■■■■■ 5.03
TRIM7-202ENST00000334421 UNC13AQ9UPW8 1703 aa45.95■■■■■ 4.95
TRIM7-202ENST00000334421 BICRAQ9NZM4 1560 aa45.58■■■■■ 4.89
TRIM7-202ENST00000334421 PABPN1Q86U42 306 aaKnown RBP eCLIP45.51■■■■■ 4.88
TRIM7-202ENST00000334421 SCRIBQ14160 1630 aa45.46■■■■■ 4.87
TRIM7-202ENST00000334421 SHROOM4Q9ULL8 1493 aa45.22■■■■■ 4.83
TRIM7-202ENST00000334421 DNAJC5BQ9UF47 199 aa44.83■■■■■ 4.77
TRIM7-202ENST00000334421 EIF4G1Q04637 1599 aaKnown RBP44.39■■■■■ 4.7
TRIM7-202ENST00000334421 CC2D2AQ9P2K1 1620 aa44.22■■■■■ 4.67
TRIM7-202ENST00000334421 CECR2Q9BXF3 1484 aa43.91■■■■■ 4.62
TRIM7-202ENST00000334421 SMARCA4P51532 1647 aa43.53■■■■■ 4.56
TRIM7-202ENST00000334421 BAZ1AQ9NRL2 1556 aaPredicted RBP43.48■■■■■ 4.55
TRIM7-202ENST00000334421 NCAPD3P42695 1498 aa43.31■■■■■ 4.52
TRIM7-202ENST00000334421 ATAD2BQ9ULI0 1458 aa43.29■■■■■ 4.52
TRIM7-202ENST00000334421 SMARCA2P51531 1590 aa43.28■■■■■ 4.52
TRIM7-202ENST00000334421 PEG3Q9GZU2 1588 aa43.17■■■■■ 4.5
TRIM7-202ENST00000334421 MROH2BQ7Z745 1585 aa43.16■■■■■ 4.5
TRIM7-202ENST00000334421 HMGXB3Q12766 1538 aa43.13■■■■■ 4.5
TRIM7-202ENST00000334421 BAZ1BQ9UIG0 1483 aaKnown RBP42.92■■■■■ 4.46
TRIM7-202ENST00000334421 WIZO95785 1651 aa42.7■■■■■ 4.43
TRIM7-202ENST00000334421 RSF1Q96T23 1441 aaPredicted RBP42.63■■■■■ 4.41
TRIM7-202ENST00000334421 TOP2AP11388 1531 aaKnown RBP42.29■■■■■ 4.36
TRIM7-202ENST00000334421 NESP48681 1621 aa42.21■■■■■ 4.35
TRIM7-202ENST00000334421 LAMC3Q9Y6N6 1575 aa42.21■■■■■ 4.35
TRIM7-202ENST00000334421 ERCC6Q03468 1493 aa42.11■■■■■ 4.33
TRIM7-202ENST00000334421 CADPSQ9ULU8 1353 aa42■■■■■ 4.31
TRIM7-202ENST00000334421 PDS5BQ9NTI5 1447 aa41.88■■■■■ 4.3
TRIM7-202ENST00000334421 CUX2O14529 1486 aa41.79■■■■■ 4.28
TRIM7-202ENST00000334421 KIF21AQ7Z4S6 1674 aa41.78■■■■■ 4.28
TRIM7-202ENST00000334421 CFTRP13569 1480 aa41.77■■■■■ 4.28
TRIM7-202ENST00000334421 CCDC88BA6NC98 1476 aa41.72■■■■■ 4.27
TRIM7-202ENST00000334421 THOC2Q8NI27 1593 aaKnown RBP41.71■■■■■ 4.27
TRIM7-202ENST00000334421 FANCD2Q9BXW9 1451 aa41.52■■■■■ 4.24
TRIM7-202ENST00000334421 PRDM2Q13029 1718 aa41.52■■■■■ 4.24
TRIM7-202ENST00000334421 CEP164Q9UPV0 1460 aa41.5■■■■■ 4.23
TRIM7-202ENST00000334421 MRC2Q9UBG0 1479 aa41.47■■■■■ 4.23
TRIM7-202ENST00000334421 WDR62O43379 1518 aa41.37■■■■■ 4.21
TRIM7-202ENST00000334421 SUPT5HO00267 1087 aaKnown RBP41.31■■■■■ 4.2
TRIM7-202ENST00000334421 URB2Q14146 1524 aaKnown RBP41.11■■■■■ 4.17
TRIM7-202ENST00000334421 ABCC8Q09428 1581 aa40.89■■■■■ 4.14
TRIM7-202ENST00000334421 TOPBP1Q92547 1522 aa40.86■■■■■ 4.13
TRIM7-202ENST00000334421 DNMBPQ6XZF7 1577 aa40.83■■■■■ 4.13
TRIM7-202ENST00000334421 IFT140Q96RY7 1462 aa40.64■■■■■ 4.1
TRIM7-202ENST00000334421 DNAJC5Q9H3Z4 198 aa40.51■■■■■ 4.08
TRIM7-202ENST00000334421 CUX1P39880 1505 aa40.51■■■■■ 4.08
TRIM7-202ENST00000334421 POLA1P09884 1462 aaPredicted RBP40.51■■■■■ 4.07
TRIM7-202ENST00000334421 TARBP1Q13395 1621 aaKnown RBP40.45■■■■■ 4.07
TRIM7-202ENST00000334421 ZNF608Q9ULD9 1512 aaPredicted RBP40.41■■■■■ 4.06
TRIM7-202ENST00000334421 FGD5Q6ZNL6 1462 aa40.38■■■■■ 4.05
TRIM7-202ENST00000334421 EIF4G3O43432 1585 aaKnown RBP40.31■■■■■ 4.04
TRIM7-202ENST00000334421 SOGA1O94964 1423 aa40.29■■■■■ 4.04
TRIM7-202ENST00000334421 RAD54L2Q9Y4B4 1467 aa40.26■■■■■ 4.04
TRIM7-202ENST00000334421 WDR97A6NE52 1622 aa40.22■■■■■ 4.03
TRIM7-202ENST00000334421 WRNQ14191 1432 aaPredicted RBP eCLIP40.2■■■■■ 4.03
TRIM7-202ENST00000334421 BIVM-ERCC5R4GMW8 1640 aa40.19■■■■■ 4.02
TRIM7-202ENST00000334421 TOP2BQ02880 1626 aa40.18■■■■■ 4.02
TRIM7-202ENST00000334421 AQRO60306 1485 aaKnown RBP eCLIP40.14■■■■■ 4.02
TRIM7-202ENST00000334421 SYNJ1O43426 1573 aa40.12■■■■■ 4.01
TRIM7-202ENST00000334421 TDRD9Q8NDG6 1382 aaKnown RBP40.04■■■■■ 4
TRIM7-202ENST00000334421 ABCA10Q8WWZ4 1543 aa40.02■■■■■ 4
TRIM7-202ENST00000334421 OSCARQ8IYS5 282 aa39.92■■■■□ 3.98
TRIM7-202ENST00000334421 ABCA5Q8WWZ7 1642 aa39.9■■■■□ 3.98
TRIM7-202ENST00000334421 GRIN2BQ13224 1484 aa39.88■■■■□ 3.98
TRIM7-202ENST00000334421 GAPVD1Q14C86 1478 aa39.86■■■■□ 3.97
TRIM7-202ENST00000334421 PBRM1Q86U86 1689 aa39.83■■■■□ 3.97
TRIM7-202ENST00000334421 SNAPC4Q5SXM2 1469 aa39.82■■■■□ 3.97
TRIM7-202ENST00000334421 MAGI1Q96QZ7 1491 aaPredicted RBP39.82■■■■□ 3.97
TRIM7-202ENST00000334421 CHD1O14646 1710 aa39.81■■■■□ 3.96
TRIM7-202ENST00000334421 SYNJ2O15056 1496 aa39.65■■■■□ 3.94
TRIM7-202ENST00000334421 FBLN2P98095 1184 aa39.6■■■■□ 3.93
TRIM7-202ENST00000334421 ERICH3Q5RHP9 1530 aa39.56■■■■□ 3.92
TRIM7-202ENST00000334421 CHMP7Q8WUX9 453 aaPredicted RBP39.54■■■■□ 3.92
TRIM7-202ENST00000334421 ADAMTS12P58397 1594 aa39.51■■■■□ 3.92
TRIM7-202ENST00000334421 CLASP1Q7Z460 1538 aa39.41■■■■□ 3.9
TRIM7-202ENST00000334421 FHAD1B1AJZ9 1412 aa39.4■■■■□ 3.9
TRIM7-202ENST00000334421 GRIN2AQ12879 1464 aa39.37■■■■□ 3.89
TRIM7-202ENST00000334421 KIF27Q86VH2 1401 aa39.37■■■■□ 3.89
TRIM7-202ENST00000334421 RIMBP3CA6NJZ7 1639 aa39.36■■■■□ 3.89
TRIM7-202ENST00000334421 RIMBP3BA6NNM3 1639 aa39.36■■■■□ 3.89
TRIM7-202ENST00000334421 RIMBP3Q9UFD9 1639 aa39.36■■■■□ 3.89
TRIM7-202ENST00000334421 ARHGEF11O15085 1522 aa39.35■■■■□ 3.89
TRIM7-202ENST00000334421 NUP160Q12769 1436 aa39.22■■■■□ 3.87
TRIM7-202ENST00000334421 CUL7Q14999 1698 aa39.2■■■■□ 3.87
TRIM7-202ENST00000334421 IGF1RP08069 1367 aa39.2■■■■□ 3.87
TRIM7-202ENST00000334421 CEP170Q5SW79 1584 aa39.18■■■■□ 3.86
TRIM7-202ENST00000334421 TRIM41Q8WV44 630 aa39.08■■■■□ 3.85
TRIM7-202ENST00000334421 ARAP1Q96P48 1450 aa39.02■■■■□ 3.84
TRIM7-202ENST00000334421 SHROOM2Q13796 1616 aa38.97■■■■□ 3.83
TRIM7-202ENST00000334421 CARMIL1Q5VZK9 1371 aa38.95■■■■□ 3.83
TRIM7-202ENST00000334421 RUSC2Q8N2Y8 1516 aa38.94■■■■□ 3.82
TRIM7-202ENST00000334421 CYB5RLQ6IPT4 315 aa38.86■■■■□ 3.81
TRIM7-202ENST00000334421 KIAA0586Q9BVV6 1533 aa38.8■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms