Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.26■■■□□ 2.59
KCNQ4P56696 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC31.26■■■□□ 2.59
KCNQ4P56696 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
KCNQ4P56696 AC022616.5-201ENST00000518796 181 ntBASIC31.26■■■□□ 2.59
KCNQ4P56696 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.25■■■□□ 2.59
KCNQ4P56696 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC31.25■■■□□ 2.59
KCNQ4P56696 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
KCNQ4P56696 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
KCNQ4P56696 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.25■■■□□ 2.59
KCNQ4P56696 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
KCNQ4P56696 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.24■■■□□ 2.59
KCNQ4P56696 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
KCNQ4P56696 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC31.24■■■□□ 2.59
KCNQ4P56696 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
KCNQ4P56696 AC092028.1-203ENST00000608262 953 ntBASIC31.23■■■□□ 2.59
KCNQ4P56696 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.23■■■□□ 2.59
KCNQ4P56696 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
KCNQ4P56696 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
KCNQ4P56696 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC31.22■■■□□ 2.59
KCNQ4P56696 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
KCNQ4P56696 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
KCNQ4P56696 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.21■■■□□ 2.59
KCNQ4P56696 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
KCNQ4P56696 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
KCNQ4P56696 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
KCNQ4P56696 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.2■■■□□ 2.59
KCNQ4P56696 AC005837.3-201ENST00000612163 286 ntBASIC31.2■■■□□ 2.59
KCNQ4P56696 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
KCNQ4P56696 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
KCNQ4P56696 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
KCNQ4P56696 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC31.18■■■□□ 2.58
KCNQ4P56696 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC31.18■■■□□ 2.58
KCNQ4P56696 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC31.18■■■□□ 2.58
KCNQ4P56696 AC096631.2-201ENST00000436136 790 ntBASIC31.17■■■□□ 2.58
KCNQ4P56696 AL117332.1-201ENST00000622628 974 ntBASIC31.17■■■□□ 2.58
KCNQ4P56696 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
KCNQ4P56696 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
KCNQ4P56696 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
KCNQ4P56696 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
KCNQ4P56696 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.16■■■□□ 2.58
KCNQ4P56696 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
KCNQ4P56696 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
KCNQ4P56696 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC31.16■■■□□ 2.58
KCNQ4P56696 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.16■■■□□ 2.58
KCNQ4P56696 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
KCNQ4P56696 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
KCNQ4P56696 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
KCNQ4P56696 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC31.15■■■□□ 2.58
KCNQ4P56696 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC31.15■■■□□ 2.58
KCNQ4P56696 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.15■■■□□ 2.58
KCNQ4P56696 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC31.14■■■□□ 2.58
KCNQ4P56696 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
KCNQ4P56696 MIR4466-201ENST00000606121 54 ntBASIC31.14■■■□□ 2.58
KCNQ4P56696 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.13■■■□□ 2.57
KCNQ4P56696 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
KCNQ4P56696 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
KCNQ4P56696 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
KCNQ4P56696 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
KCNQ4P56696 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
KCNQ4P56696 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC31.12■■■□□ 2.57
KCNQ4P56696 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
KCNQ4P56696 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
KCNQ4P56696 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
KCNQ4P56696 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
KCNQ4P56696 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
KCNQ4P56696 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
KCNQ4P56696 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
KCNQ4P56696 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC31.1■■■□□ 2.57
KCNQ4P56696 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
KCNQ4P56696 ABCB10P1-201ENST00000614297 2181 ntBASIC31.1■■■□□ 2.57
KCNQ4P56696 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
KCNQ4P56696 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.1■■■□□ 2.57
KCNQ4P56696 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
KCNQ4P56696 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
KCNQ4P56696 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
KCNQ4P56696 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC31.09■■■□□ 2.57
KCNQ4P56696 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC31.09■■■□□ 2.57
KCNQ4P56696 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
KCNQ4P56696 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC31.09■■■□□ 2.57
KCNQ4P56696 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.09■■■□□ 2.57
KCNQ4P56696 AL449106.1-201ENST00000608517 1980 ntBASIC31.08■■■□□ 2.57
KCNQ4P56696 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
KCNQ4P56696 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC31.08■■■□□ 2.57
KCNQ4P56696 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
KCNQ4P56696 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
KCNQ4P56696 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
KCNQ4P56696 MIR3621-201ENST00000580529 85 ntBASIC31.08■■■□□ 2.57
KCNQ4P56696 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
KCNQ4P56696 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
KCNQ4P56696 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.08■■■□□ 2.57
KCNQ4P56696 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
KCNQ4P56696 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
KCNQ4P56696 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
KCNQ4P56696 AC010997.5-201ENST00000609182 354 ntBASIC31.07■■■□□ 2.56
KCNQ4P56696 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.07■■■□□ 2.56
KCNQ4P56696 LSM4-201ENST00000252816 986 ntTSL 2 BASIC31.06■■■□□ 2.56
KCNQ4P56696 MIR4281-201ENST00000580852 62 ntBASIC31.06■■■□□ 2.56
KCNQ4P56696 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
KCNQ4P56696 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
KCNQ4P56696 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms