Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCR9P51686 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCR9P51686 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCR9P51686 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCR9P51686 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.07■□□□□ 0.96
CCR9P51686 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.07■□□□□ 0.96
CCR9P51686 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.07■□□□□ 0.96
CCR9P51686 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCR9P51686 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.07■□□□□ 0.96
CCR9P51686 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.07■□□□□ 0.96
CCR9P51686 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCR9P51686 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCR9P51686 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCR9P51686 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCR9P51686 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCR9P51686 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCR9P51686 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCR9P51686 HLA-V-202ENST00000446817 847 ntBASIC21.06■□□□□ 0.96
CCR9P51686 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.06■□□□□ 0.96
CCR9P51686 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.06■□□□□ 0.96
CCR9P51686 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCR9P51686 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCR9P51686 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.06■□□□□ 0.96
CCR9P51686 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCR9P51686 AL139125.2-201ENST00000623134 1869 ntBASIC21.05■□□□□ 0.96
CCR9P51686 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCR9P51686 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCR9P51686 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCR9P51686 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.05■□□□□ 0.96
CCR9P51686 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCR9P51686 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.04■□□□□ 0.96
CCR9P51686 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCR9P51686 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCR9P51686 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCR9P51686 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCR9P51686 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCR9P51686 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCR9P51686 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCR9P51686 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCR9P51686 RPS2P35-201ENST00000443417 897 ntBASIC21.03■□□□□ 0.96
CCR9P51686 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCR9P51686 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCR9P51686 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCR9P51686 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCR9P51686 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.02■□□□□ 0.96
CCR9P51686 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCR9P51686 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCR9P51686 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCR9P51686 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.02■□□□□ 0.96
CCR9P51686 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCR9P51686 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCR9P51686 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.01■□□□□ 0.95
CCR9P51686 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCR9P51686 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCR9P51686 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCR9P51686 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCR9P51686 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.01■□□□□ 0.95
CCR9P51686 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCR9P51686 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.01■□□□□ 0.95
CCR9P51686 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCR9P51686 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21■□□□□ 0.95
CCR9P51686 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCR9P51686 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21■□□□□ 0.95
CCR9P51686 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21■□□□□ 0.95
CCR9P51686 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21■□□□□ 0.95
CCR9P51686 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCR9P51686 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCR9P51686 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCR9P51686 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCR9P51686 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.99■□□□□ 0.95
CCR9P51686 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCR9P51686 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.99■□□□□ 0.95
CCR9P51686 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCR9P51686 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCR9P51686 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.99■□□□□ 0.95
CCR9P51686 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
CCR9P51686 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.99■□□□□ 0.95
CCR9P51686 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCR9P51686 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.99■□□□□ 0.95
CCR9P51686 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCR9P51686 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.99■□□□□ 0.95
CCR9P51686 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCR9P51686 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCR9P51686 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCR9P51686 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCR9P51686 AC126177.7-201ENST00000547904 679 ntBASIC20.98■□□□□ 0.95
CCR9P51686 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.98■□□□□ 0.95
CCR9P51686 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCR9P51686 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCR9P51686 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCR9P51686 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCR9P51686 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCR9P51686 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.97■□□□□ 0.95
CCR9P51686 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCR9P51686 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCR9P51686 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCR9P51686 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCR9P51686 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCR9P51686 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCR9P51686 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms