RNA–Protein interactions for RNA: ENST00000327283.7

PTPN2-202, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN2, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-202ENST00000327283 NISCHQ9Y2I1 1504 aa49.87■■■■■ 5.57
PTPN2-202ENST00000327283 CCDC180Q9P1Z9 1646 aa43.09■■■■■ 4.49
PTPN2-202ENST00000327283 ZCCHC6Q5VYS8 1495 aaKnown RBP42.16■■■■■ 4.34
PTPN2-202ENST00000327283 DCAF1Q9Y4B6 1507 aa41.38■■■■■ 4.21
PTPN2-202ENST00000327283 SHROOM4Q9ULL8 1493 aa41.22■■■■■ 4.19
PTPN2-202ENST00000327283 DCAF8L2P0C7V8 631 aa40.49■■■■■ 4.07
PTPN2-202ENST00000327283 MYO15BQ96JP2 1530 aa40.48■■■■■ 4.07
PTPN2-202ENST00000327283 SUPT5HO00267 1087 aaKnown RBP40.25■■■■■ 4.03
PTPN2-202ENST00000327283 NACADO15069 1562 aa39.81■■■■□ 3.96
PTPN2-202ENST00000327283 ABCC9O60706 1549 aa39.7■■■■□ 3.95
PTPN2-202ENST00000327283 SCRIBQ14160 1630 aa39.58■■■■□ 3.93
PTPN2-202ENST00000327283 CHIC1Q5VXU3 224 aa39.26■■■■□ 3.87
PTPN2-202ENST00000327283 RB1CC1Q8TDY2 1594 aa39.16■■■■□ 3.86
PTPN2-202ENST00000327283 RSF1Q96T23 1441 aaPredicted RBP39.08■■■■□ 3.85
PTPN2-202ENST00000327283 CECR2Q9BXF3 1484 aa38.54■■■■□ 3.76
PTPN2-202ENST00000327283 MROH2BQ7Z745 1585 aa38.51■■■■□ 3.76
PTPN2-202ENST00000327283 BAZ1AQ9NRL2 1556 aaPredicted RBP38.45■■■■□ 3.75
PTPN2-202ENST00000327283 UNC13AQ9UPW8 1703 aa38.43■■■■□ 3.74
PTPN2-202ENST00000327283 WIZO95785 1651 aa38.27■■■■□ 3.72
PTPN2-202ENST00000327283 SMARCA4P51532 1647 aa38.11■■■■□ 3.69
PTPN2-202ENST00000327283 TOP2AP11388 1531 aaKnown RBP37.99■■■■□ 3.67
PTPN2-202ENST00000327283 BICRAQ9NZM4 1560 aa37.92■■■■□ 3.66
PTPN2-202ENST00000327283 EIF4G1Q04637 1599 aaKnown RBP37.86■■■■□ 3.65
PTPN2-202ENST00000327283 TRIM41Q8WV44 630 aa37.85■■■■□ 3.65
PTPN2-202ENST00000327283 PEG3Q9GZU2 1588 aa37.68■■■■□ 3.62
PTPN2-202ENST00000327283 LOC105371045A0A1W2PR82 267 aa37.66■■■■□ 3.62
PTPN2-202ENST00000327283 SMARCA2P51531 1590 aa37.64■■■■□ 3.62
PTPN2-202ENST00000327283 CCDC88BA6NC98 1476 aa37.53■■■■□ 3.6
PTPN2-202ENST00000327283 PABPN1Q86U42 306 aaKnown RBP eCLIP37.32■■■■□ 3.56
PTPN2-202ENST00000327283 HRCP23327 699 aa37.22■■■■□ 3.55
PTPN2-202ENST00000327283 PCGF6Q9BYE7 350 aa37.19■■■■□ 3.54
PTPN2-202ENST00000327283 ATAD2BQ9ULI0 1458 aa37.15■■■■□ 3.54
PTPN2-202ENST00000327283 TRIM26Q12899 539 aaPredicted RBP37.06■■■■□ 3.52
PTPN2-202ENST00000327283 ABCC8Q09428 1581 aa37.06■■■■□ 3.52
PTPN2-202ENST00000327283 FAM9AQ8IZU1 332 aaPredicted RBP37.05■■■■□ 3.52
PTPN2-202ENST00000327283 BAZ1BQ9UIG0 1483 aaKnown RBP37.01■■■■□ 3.52
PTPN2-202ENST00000327283 EEA1Q15075 1411 aa36.98■■■■□ 3.51
PTPN2-202ENST00000327283 HMGXB3Q12766 1538 aa36.79■■■■□ 3.48
PTPN2-202ENST00000327283 WRNQ14191 1432 aaPredicted RBP eCLIP36.76■■■■□ 3.48
PTPN2-202ENST00000327283 NCAPD3P42695 1498 aa36.68■■■■□ 3.46
PTPN2-202ENST00000327283 SOGA1O94964 1423 aa36.58■■■■□ 3.45
PTPN2-202ENST00000327283 SYNJ1O43426 1573 aa36.56■■■■□ 3.44
PTPN2-202ENST00000327283 TNIKQ9UKE5 1360 aa36.54■■■■□ 3.44
PTPN2-202ENST00000327283 CSRNP3Q8WYN3 585 aa36.48■■■■□ 3.43
PTPN2-202ENST00000327283 GOLGA3Q08378 1498 aa36.44■■■■□ 3.42
PTPN2-202ENST00000327283 KIF21BO75037 1637 aa36.42■■■■□ 3.42
PTPN2-202ENST00000327283 TOP2BQ02880 1626 aa36.4■■■■□ 3.42
PTPN2-202ENST00000327283 BIVM-ERCC5R4GMW8 1640 aa36.39■■■■□ 3.42
PTPN2-202ENST00000327283 CEP162Q5TB80 1403 aa36.37■■■■□ 3.41
PTPN2-202ENST00000327283 RUSC2Q8N2Y8 1516 aa36.35■■■■□ 3.41
PTPN2-202ENST00000327283 EHMT2Q96KQ7 1210 aa36.34■■■■□ 3.41
PTPN2-202ENST00000327283 CEP164Q9UPV0 1460 aa36.33■■■■□ 3.41
PTPN2-202ENST00000327283 ZEB1P37275 1124 aaPredicted RBP36.31■■■■□ 3.4
PTPN2-202ENST00000327283 PRDM2Q13029 1718 aa36.22■■■■□ 3.39
PTPN2-202ENST00000327283 CFTRP13569 1480 aa36.18■■■■□ 3.38
PTPN2-202ENST00000327283 UBTFP17480 764 aaKnown RBP36.04■■■■□ 3.36
PTPN2-202ENST00000327283 ERICH3Q5RHP9 1530 aa35.97■■■■□ 3.35
PTPN2-202ENST00000327283 CUX1P39880 1505 aa35.96■■■■□ 3.35
PTPN2-202ENST00000327283 PPARGC1BQ86YN6 1023 aaKnown RBP35.93■■■■□ 3.34
PTPN2-202ENST00000327283 CLIP1P30622 1438 aa35.83■■■■□ 3.33
PTPN2-202ENST00000327283 RAPGEF2Q9Y4G8 1499 aa35.83■■■■□ 3.33
PTPN2-202ENST00000327283 PRXQ9BXM0 1461 aa35.82■■■■□ 3.33
PTPN2-202ENST00000327283 CC2D2AQ9P2K1 1620 aa35.82■■■■□ 3.32
PTPN2-202ENST00000327283 CADPSQ9ULU8 1353 aa35.77■■■■□ 3.32
PTPN2-202ENST00000327283 KIF27Q86VH2 1401 aa35.76■■■■□ 3.31
PTPN2-202ENST00000327283 VPS8Q8N3P4 1428 aa35.73■■■■□ 3.31
PTPN2-202ENST00000327283 FANCD2Q9BXW9 1451 aa35.38■■■■□ 3.25
PTPN2-202ENST00000327283 FGD5Q6ZNL6 1462 aa35.37■■■■□ 3.25
PTPN2-202ENST00000327283 DNMBPQ6XZF7 1577 aa35.35■■■■□ 3.25
PTPN2-202ENST00000327283 CUX2O14529 1486 aa35.34■■■■□ 3.25
PTPN2-202ENST00000327283 ARAP1Q96P48 1450 aa35.34■■■■□ 3.25
PTPN2-202ENST00000327283 APLP2Q06481 763 aa35.32■■■■□ 3.25
PTPN2-202ENST00000327283 CCER1Q8TC90 406 aaPredicted RBP35.32■■■■□ 3.24
PTPN2-202ENST00000327283 LAMC3Q9Y6N6 1575 aa35.28■■■■□ 3.24
PTPN2-202ENST00000327283 IGF1RP08069 1367 aa35.26■■■■□ 3.24
PTPN2-202ENST00000327283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.23■■■■□ 3.23
PTPN2-202ENST00000327283 ABCA10Q8WWZ4 1543 aa35.16■■■■□ 3.22
PTPN2-202ENST00000327283 TTBK1Q5TCY1 1321 aaPredicted RBP35.16■■■■□ 3.22
PTPN2-202ENST00000327283 TOPBP1Q92547 1522 aa35.15■■■■□ 3.22
PTPN2-202ENST00000327283 ARHGAP35Q9NRY4 1499 aa35.13■■■■□ 3.21
PTPN2-202ENST00000327283 CARMIL1Q5VZK9 1371 aa35.12■■■■□ 3.21
PTPN2-202ENST00000327283 CUL7Q14999 1698 aa35.05■■■■□ 3.2
PTPN2-202ENST00000327283 POLA1P09884 1462 aaPredicted RBP35.04■■■■□ 3.2
PTPN2-202ENST00000327283 MAP3K1Q13233 1512 aa35.04■■■■□ 3.2
PTPN2-202ENST00000327283 WDR97A6NE52 1622 aa34.99■■■■□ 3.19
PTPN2-202ENST00000327283 NESP48681 1621 aa34.98■■■■□ 3.19
PTPN2-202ENST00000327283 PDS5BQ9NTI5 1447 aa34.92■■■■□ 3.18
PTPN2-202ENST00000327283 RANGAP1P46060 587 aaPredicted RBP34.92■■■■□ 3.18
PTPN2-202ENST00000327283 RRBP1Q9P2E9 1410 aaKnown RBP34.89■■■■□ 3.18
PTPN2-202ENST00000327283 URB2Q14146 1524 aaKnown RBP34.87■■■■□ 3.17
PTPN2-202ENST00000327283 RAD54L2Q9Y4B4 1467 aa34.86■■■■□ 3.17
PTPN2-202ENST00000327283 EFCAB5A4FU69 1503 aa34.85■■■■□ 3.17
PTPN2-202ENST00000327283 FHAD1B1AJZ9 1412 aa34.83■■■■□ 3.17
PTPN2-202ENST00000327283 CTTNBP2Q8WZ74 1663 aa34.81■■■■□ 3.16
PTPN2-202ENST00000327283 ABCA5Q8WWZ7 1642 aa34.8■■■■□ 3.16
PTPN2-202ENST00000327283 TIAM1Q13009 1591 aa34.79■■■■□ 3.16
PTPN2-202ENST00000327283 HNRNPUL2Q1KMD3 747 aaKnown RBP34.76■■■■□ 3.16
PTPN2-202ENST00000327283 CFAP43Q8NDM7 1665 aa34.73■■■■□ 3.15
PTPN2-202ENST00000327283 CLSPNQ9HAW4 1339 aa34.72■■■■□ 3.15
PTPN2-202ENST00000327283 KANK4Q5T7N3 995 aaPredicted RBP34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms