RNA–Protein interactions for RNA: ENST00000378756.7

ATAD3A-203, Transcript of ATPase family, AAA domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATAD3A, Length 2,492 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-203ENST00000378756 NISCHQ9Y2I1 1504 aa46.28■■■■■ 5
ATAD3A-203ENST00000378756 SHROOM4Q9ULL8 1493 aa39.96■■■■□ 3.99
ATAD3A-203ENST00000378756 SUPT5HO00267 1087 aaKnown RBP39.37■■■■□ 3.89
ATAD3A-203ENST00000378756 ZCCHC6Q5VYS8 1495 aaKnown RBP39.23■■■■□ 3.87
ATAD3A-203ENST00000378756 CCDC180Q9P1Z9 1646 aa39.05■■■■□ 3.84
ATAD3A-203ENST00000378756 MYO15BQ96JP2 1530 aa38.47■■■■□ 3.75
ATAD3A-203ENST00000378756 CHIC1Q5VXU3 224 aa38.45■■■■□ 3.75
ATAD3A-203ENST00000378756 DCAF8L2P0C7V8 631 aa38.41■■■■□ 3.74
ATAD3A-203ENST00000378756 HRCP23327 699 aa38.01■■■■□ 3.67
ATAD3A-203ENST00000378756 DCAF1Q9Y4B6 1507 aa37.87■■■■□ 3.65
ATAD3A-203ENST00000378756 PCGF6Q9BYE7 350 aa37.76■■■■□ 3.63
ATAD3A-203ENST00000378756 LOC105371045A0A1W2PR82 267 aa37.4■■■■□ 3.58
ATAD3A-203ENST00000378756 PPARGC1BQ86YN6 1023 aaKnown RBP37.27■■■■□ 3.56
ATAD3A-203ENST00000378756 ABCC9O60706 1549 aa37.11■■■■□ 3.53
ATAD3A-203ENST00000378756 TRIM26Q12899 539 aaPredicted RBP36.85■■■■□ 3.49
ATAD3A-203ENST00000378756 RSF1Q96T23 1441 aaPredicted RBP36.84■■■■□ 3.49
ATAD3A-203ENST00000378756 SCRIBQ14160 1630 aa36.83■■■■□ 3.49
ATAD3A-203ENST00000378756 TRIM41Q8WV44 630 aa36.58■■■■□ 3.45
ATAD3A-203ENST00000378756 RB1CC1Q8TDY2 1594 aa36.55■■■■□ 3.44
ATAD3A-203ENST00000378756 FAM9AQ8IZU1 332 aaPredicted RBP36.4■■■■□ 3.42
ATAD3A-203ENST00000378756 ZEB1P37275 1124 aaPredicted RBP36.17■■■■□ 3.38
ATAD3A-203ENST00000378756 CECR2Q9BXF3 1484 aa36.16■■■■□ 3.38
ATAD3A-203ENST00000378756 EHMT2Q96KQ7 1210 aa36.15■■■■□ 3.38
ATAD3A-203ENST00000378756 MROH2BQ7Z745 1585 aa36.06■■■■□ 3.36
ATAD3A-203ENST00000378756 NACADO15069 1562 aa36.02■■■■□ 3.36
ATAD3A-203ENST00000378756 WIZO95785 1651 aa35.9■■■■□ 3.34
ATAD3A-203ENST00000378756 BAZ1AQ9NRL2 1556 aaPredicted RBP35.64■■■■□ 3.3
ATAD3A-203ENST00000378756 EIF4G1Q04637 1599 aaKnown RBP35.56■■■■□ 3.28
ATAD3A-203ENST00000378756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.39■■■■□ 3.26
ATAD3A-203ENST00000378756 SCAF1Q9H7N4 1312 aaKnown RBP35.35■■■■□ 3.25
ATAD3A-203ENST00000378756 ABCC8Q09428 1581 aa35.29■■■■□ 3.24
ATAD3A-203ENST00000378756 CCER1Q8TC90 406 aaPredicted RBP35.27■■■■□ 3.24
ATAD3A-203ENST00000378756 TOP2AP11388 1531 aaKnown RBP35.27■■■■□ 3.24
ATAD3A-203ENST00000378756 CCDC88BA6NC98 1476 aa35.24■■■■□ 3.23
ATAD3A-203ENST00000378756 SMARCA4P51532 1647 aa35.16■■■■□ 3.22
ATAD3A-203ENST00000378756 SMARCA2P51531 1590 aa35.13■■■■□ 3.21
ATAD3A-203ENST00000378756 TTBK1Q5TCY1 1321 aaPredicted RBP35.09■■■■□ 3.21
ATAD3A-203ENST00000378756 WRNQ14191 1432 aaPredicted RBP eCLIP35.09■■■■□ 3.21
ATAD3A-203ENST00000378756 CEP162Q5TB80 1403 aa35.06■■■■□ 3.2
ATAD3A-203ENST00000378756 SOGA1O94964 1423 aa35.05■■■■□ 3.2
ATAD3A-203ENST00000378756 PELP1Q8IZL8 1130 aaKnown RBP34.96■■■■□ 3.19
ATAD3A-203ENST00000378756 TNIKQ9UKE5 1360 aa34.93■■■■□ 3.18
ATAD3A-203ENST00000378756 UNC13AQ9UPW8 1703 aa34.92■■■■□ 3.18
ATAD3A-203ENST00000378756 RUSC2Q8N2Y8 1516 aa34.88■■■■□ 3.17
ATAD3A-203ENST00000378756 CSRNP3Q8WYN3 585 aa34.84■■■■□ 3.17
ATAD3A-203ENST00000378756 ACIN1Q9UKV3 1341 aaKnown RBP34.82■■■■□ 3.17
ATAD3A-203ENST00000378756 DIEXFQ68CQ4 756 aaKnown RBP34.82■■■■□ 3.16
ATAD3A-203ENST00000378756 EEA1Q15075 1411 aa34.8■■■■□ 3.16
ATAD3A-203ENST00000378756 UBTFP17480 764 aaKnown RBP34.8■■■■□ 3.16
ATAD3A-203ENST00000378756 NEUROD1Q13562 356 aa34.78■■■■□ 3.16
ATAD3A-203ENST00000378756 GOLGA3Q08378 1498 aa34.66■■■■□ 3.14
ATAD3A-203ENST00000378756 PABPN1Q86U42 306 aaKnown RBP eCLIP34.56■■■■□ 3.122e-6■■■■□ 20.4
ATAD3A-203ENST00000378756 CENPBP07199 599 aaPredicted RBP34.5■■■■□ 3.11
ATAD3A-203ENST00000378756 GTF3C3Q9Y5Q9 886 aa34.46■■■■□ 3.11
ATAD3A-203ENST00000378756 BICRAQ9NZM4 1560 aa34.46■■■■□ 3.11
ATAD3A-203ENST00000378756 ZNF316A6NFI3 1004 aaPredicted RBP34.43■■■■□ 3.1
ATAD3A-203ENST00000378756 SYNJ1O43426 1573 aa34.43■■■■□ 3.1
ATAD3A-203ENST00000378756 CEP164Q9UPV0 1460 aa34.4■■■■□ 3.1
ATAD3A-203ENST00000378756 PEG3Q9GZU2 1588 aa34.4■■■■□ 3.1
ATAD3A-203ENST00000378756 KIF21BO75037 1637 aa34.34■■■■□ 3.09
ATAD3A-203ENST00000378756 HNRNPUL2Q1KMD3 747 aaKnown RBP34.33■■■■□ 3.09
ATAD3A-203ENST00000378756 CLIP1P30622 1438 aa34.31■■■■□ 3.08
ATAD3A-203ENST00000378756 VPS8Q8N3P4 1428 aa34.2■■■■□ 3.07
ATAD3A-203ENST00000378756 ATAD2BQ9ULI0 1458 aa34.16■■■■□ 3.06
ATAD3A-203ENST00000378756 RAPGEF2Q9Y4G8 1499 aa34.15■■■■□ 3.06
ATAD3A-203ENST00000378756 BAZ1BQ9UIG0 1483 aaKnown RBP34.12■■■■□ 3.05
ATAD3A-203ENST00000378756 YTHDC1Q96MU7 727 aaKnown RBP34.1■■■■□ 3.05
ATAD3A-203ENST00000378756 RANGAP1P46060 587 aaPredicted RBP34.09■■■■□ 3.05
ATAD3A-203ENST00000378756 APLP2Q06481 763 aa34.07■■■■□ 3.04
ATAD3A-203ENST00000378756 MIER1Q8N108 512 aa34.04■■■■□ 3.04
ATAD3A-203ENST00000378756 TOP2BQ02880 1626 aa33.9■■■■□ 3.02
ATAD3A-203ENST00000378756 BIVM-ERCC5R4GMW8 1640 aa33.75■■■□□ 2.99
ATAD3A-203ENST00000378756 ARAP1Q96P48 1450 aa33.72■■■□□ 2.99
ATAD3A-203ENST00000378756 PRXQ9BXM0 1461 aa33.71■■■□□ 2.99
ATAD3A-203ENST00000378756 ERICH3Q5RHP9 1530 aa33.7■■■□□ 2.99
ATAD3A-203ENST00000378756 DHX57Q6P158 1386 aaKnown RBP33.67■■■□□ 2.98
ATAD3A-203ENST00000378756 KANK4Q5T7N3 995 aaPredicted RBP33.65■■■□□ 2.98
ATAD3A-203ENST00000378756 CLSPNQ9HAW4 1339 aa33.6■■■□□ 2.97
ATAD3A-203ENST00000378756 CUX1P39880 1505 aa33.53■■■□□ 2.96
ATAD3A-203ENST00000378756 RRBP1Q9P2E9 1410 aaKnown RBP33.46■■■□□ 2.95
ATAD3A-203ENST00000378756 KIF27Q86VH2 1401 aa33.45■■■□□ 2.95
ATAD3A-203ENST00000378756 HMGXB3Q12766 1538 aa33.38■■■□□ 2.93
ATAD3A-203ENST00000378756 NCAPD3P42695 1498 aa33.37■■■□□ 2.93
ATAD3A-203ENST00000378756 ARHGAP35Q9NRY4 1499 aa33.35■■■□□ 2.93
ATAD3A-203ENST00000378756 CCNB3Q8WWL7 1395 aa33.32■■■□□ 2.93
ATAD3A-203ENST00000378756 CUX2O14529 1486 aa33.31■■■□□ 2.92
ATAD3A-203ENST00000378756 ITGAEP38570 1179 aa33.27■■■□□ 2.92
ATAD3A-203ENST00000378756 CFTRP13569 1480 aa33.26■■■□□ 2.91
ATAD3A-203ENST00000378756 MYT1Q01538 1121 aa33.23■■■□□ 2.91
ATAD3A-203ENST00000378756 RAB3GAP2Q9H2M9 1393 aa33.11■■■□□ 2.89
ATAD3A-203ENST00000378756 SUPT16HQ9Y5B9 1047 aaKnown RBP33.09■■■□□ 2.89
ATAD3A-203ENST00000378756 IGF1RP08069 1367 aa33.08■■■□□ 2.89
ATAD3A-203ENST00000378756 MAPKBP1O60336 1514 aa33.04■■■□□ 2.88
ATAD3A-203ENST00000378756 TIAM1Q13009 1591 aa33.04■■■□□ 2.88
ATAD3A-203ENST00000378756 MAP3K1Q13233 1512 aa32.96■■■□□ 2.87
ATAD3A-203ENST00000378756 PRDM2Q13029 1718 aa32.94■■■□□ 2.86
ATAD3A-203ENST00000378756 CARMIL1Q5VZK9 1371 aa32.94■■■□□ 2.86
ATAD3A-203ENST00000378756 LRRC9Q6ZRR7 1453 aa32.93■■■□□ 2.86
ATAD3A-203ENST00000378756 SETD5Q9C0A6 1442 aa32.92■■■□□ 2.86
ATAD3A-203ENST00000378756 KCNH8Q96L42 1107 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms