RNA–Protein interactions for RNA: ENST00000522727.5

RAB11FIP1-203, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-203ENST00000522727 NISCHQ9Y2I1 1504 aa49.22■■■■■ 5.47
RAB11FIP1-203ENST00000522727 CCDC180Q9P1Z9 1646 aa43.19■■■■■ 4.5
RAB11FIP1-203ENST00000522727 ABCC9O60706 1549 aa41.38■■■■■ 4.22
RAB11FIP1-203ENST00000522727 ZCCHC6Q5VYS8 1495 aaKnown RBP41.29■■■■■ 4.2
RAB11FIP1-203ENST00000522727 DCAF8L2P0C7V8 631 aa40.87■■■■■ 4.13
RAB11FIP1-203ENST00000522727 SHROOM4Q9ULL8 1493 aa40.68■■■■■ 4.1
RAB11FIP1-203ENST00000522727 DCAF1Q9Y4B6 1507 aa40.65■■■■■ 4.1
RAB11FIP1-203ENST00000522727 MYO15BQ96JP2 1530 aa40.37■■■■■ 4.05
RAB11FIP1-203ENST00000522727 NACADO15069 1562 aa40.34■■■■■ 4.05
RAB11FIP1-203ENST00000522727 RB1CC1Q8TDY2 1594 aa40.14■■■■■ 4.02
RAB11FIP1-203ENST00000522727 SUPT5HO00267 1087 aaKnown RBP39.86■■■■□ 3.97
RAB11FIP1-203ENST00000522727 SCRIBQ14160 1630 aa39.67■■■■□ 3.94
RAB11FIP1-203ENST00000522727 UNC13AQ9UPW8 1703 aa39.4■■■■□ 3.9
RAB11FIP1-203ENST00000522727 CHIC1Q5VXU3 224 aa39■■■■□ 3.83
RAB11FIP1-203ENST00000522727 BICRAQ9NZM4 1560 aa38.98■■■■□ 3.83
RAB11FIP1-203ENST00000522727 PABPN1Q86U42 306 aaKnown RBP eCLIP38.92■■■■□ 3.82
RAB11FIP1-203ENST00000522727 RSF1Q96T23 1441 aaPredicted RBP38.41■■■■□ 3.74
RAB11FIP1-203ENST00000522727 CECR2Q9BXF3 1484 aa38.32■■■■□ 3.72
RAB11FIP1-203ENST00000522727 BAZ1AQ9NRL2 1556 aaPredicted RBP38.03■■■■□ 3.68
RAB11FIP1-203ENST00000522727 MROH2BQ7Z745 1585 aa38.03■■■■□ 3.68
RAB11FIP1-203ENST00000522727 SMARCA4P51532 1647 aa37.97■■■■□ 3.67
RAB11FIP1-203ENST00000522727 EIF4G1Q04637 1599 aaKnown RBP37.83■■■■□ 3.65
RAB11FIP1-203ENST00000522727 WIZO95785 1651 aa37.71■■■■□ 3.63
RAB11FIP1-203ENST00000522727 PEG3Q9GZU2 1588 aa37.5■■■■□ 3.59
RAB11FIP1-203ENST00000522727 LOC105371045A0A1W2PR82 267 aa37.5■■■■□ 3.59
RAB11FIP1-203ENST00000522727 HRCP23327 699 aa37.48■■■■□ 3.59
RAB11FIP1-203ENST00000522727 ATAD2BQ9ULI0 1458 aa37.47■■■■□ 3.59
RAB11FIP1-203ENST00000522727 CC2D2AQ9P2K1 1620 aa37.44■■■■□ 3.58
RAB11FIP1-203ENST00000522727 TRIM41Q8WV44 630 aa37.43■■■■□ 3.58
RAB11FIP1-203ENST00000522727 SMARCA2P51531 1590 aa37.42■■■■□ 3.58
RAB11FIP1-203ENST00000522727 PCGF6Q9BYE7 350 aa37.3■■■■□ 3.56
RAB11FIP1-203ENST00000522727 TOP2AP11388 1531 aaKnown RBP37.25■■■■□ 3.55
RAB11FIP1-203ENST00000522727 NCAPD3P42695 1498 aa37.23■■■■□ 3.55
RAB11FIP1-203ENST00000522727 BAZ1BQ9UIG0 1483 aaKnown RBP37.23■■■■□ 3.55
RAB11FIP1-203ENST00000522727 HMGXB3Q12766 1538 aa37.13■■■■□ 3.53
RAB11FIP1-203ENST00000522727 DNAJC5BQ9UF47 199 aa37.05■■■■□ 3.52
RAB11FIP1-203ENST00000522727 TRIM26Q12899 539 aaPredicted RBP37.02■■■■□ 3.52
RAB11FIP1-203ENST00000522727 CCDC88BA6NC98 1476 aa36.88■■■■□ 3.49
RAB11FIP1-203ENST00000522727 FAM9AQ8IZU1 332 aaPredicted RBP36.7■■■■□ 3.47
RAB11FIP1-203ENST00000522727 ABCC8Q09428 1581 aa36.44■■■■□ 3.42
RAB11FIP1-203ENST00000522727 EEA1Q15075 1411 aa36.4■■■■□ 3.42
RAB11FIP1-203ENST00000522727 ZEB1P37275 1124 aaPredicted RBP36.33■■■■□ 3.41
RAB11FIP1-203ENST00000522727 CFTRP13569 1480 aa36.25■■■■□ 3.39
RAB11FIP1-203ENST00000522727 CADPSQ9ULU8 1353 aa36.24■■■■□ 3.39
RAB11FIP1-203ENST00000522727 PPARGC1BQ86YN6 1023 aaKnown RBP36.24■■■■□ 3.39
RAB11FIP1-203ENST00000522727 NESP48681 1621 aa36.17■■■■□ 3.38
RAB11FIP1-203ENST00000522727 WRNQ14191 1432 aaPredicted RBP eCLIP36.16■■■■□ 3.38
RAB11FIP1-203ENST00000522727 TNIKQ9UKE5 1360 aa36.09■■■■□ 3.37
RAB11FIP1-203ENST00000522727 PRDM2Q13029 1718 aa36.09■■■■□ 3.37
RAB11FIP1-203ENST00000522727 SOGA1O94964 1423 aa36.08■■■■□ 3.37
RAB11FIP1-203ENST00000522727 LAMC3Q9Y6N6 1575 aa36.07■■■■□ 3.37
RAB11FIP1-203ENST00000522727 EHMT2Q96KQ7 1210 aa36.05■■■■□ 3.36
RAB11FIP1-203ENST00000522727 CSRNP3Q8WYN3 585 aa35.99■■■■□ 3.35
RAB11FIP1-203ENST00000522727 CEP162Q5TB80 1403 aa35.96■■■■□ 3.35
RAB11FIP1-203ENST00000522727 GOLGA3Q08378 1498 aa35.9■■■■□ 3.34
RAB11FIP1-203ENST00000522727 SYNJ1O43426 1573 aa35.86■■■■□ 3.33
RAB11FIP1-203ENST00000522727 FANCD2Q9BXW9 1451 aa35.86■■■■□ 3.33
RAB11FIP1-203ENST00000522727 RUSC2Q8N2Y8 1516 aa35.83■■■■□ 3.33
RAB11FIP1-203ENST00000522727 KIF21BO75037 1637 aa35.8■■■■□ 3.32
RAB11FIP1-203ENST00000522727 PDS5BQ9NTI5 1447 aa35.79■■■■□ 3.32
RAB11FIP1-203ENST00000522727 CEP164Q9UPV0 1460 aa35.76■■■■□ 3.32
RAB11FIP1-203ENST00000522727 KIF21AQ7Z4S6 1674 aa35.75■■■■□ 3.31
RAB11FIP1-203ENST00000522727 TOP2BQ02880 1626 aa35.64■■■■□ 3.3
RAB11FIP1-203ENST00000522727 CUX1P39880 1505 aa35.59■■■■□ 3.29
RAB11FIP1-203ENST00000522727 UBTFP17480 764 aaKnown RBP35.58■■■■□ 3.29
RAB11FIP1-203ENST00000522727 BIVM-ERCC5R4GMW8 1640 aa35.57■■■■□ 3.28
RAB11FIP1-203ENST00000522727 ERCC6Q03468 1493 aa35.51■■■■□ 3.27
RAB11FIP1-203ENST00000522727 URB2Q14146 1524 aaKnown RBP35.46■■■■□ 3.27
RAB11FIP1-203ENST00000522727 DNMBPQ6XZF7 1577 aa35.43■■■■□ 3.26
RAB11FIP1-203ENST00000522727 TOPBP1Q92547 1522 aa35.41■■■■□ 3.26
RAB11FIP1-203ENST00000522727 MRC2Q9UBG0 1479 aa35.39■■■■□ 3.26
RAB11FIP1-203ENST00000522727 CLIP1P30622 1438 aa35.36■■■■□ 3.25
RAB11FIP1-203ENST00000522727 ERICH3Q5RHP9 1530 aa35.32■■■■□ 3.24
RAB11FIP1-203ENST00000522727 RAPGEF2Q9Y4G8 1499 aa35.3■■■■□ 3.24
RAB11FIP1-203ENST00000522727 VPS8Q8N3P4 1428 aa35.28■■■■□ 3.24
RAB11FIP1-203ENST00000522727 FGD5Q6ZNL6 1462 aa35.28■■■■□ 3.24
RAB11FIP1-203ENST00000522727 THOC2Q8NI27 1593 aaKnown RBP35.27■■■■□ 3.24
RAB11FIP1-203ENST00000522727 CCER1Q8TC90 406 aaPredicted RBP35.25■■■■□ 3.23
RAB11FIP1-203ENST00000522727 WDR62O43379 1518 aa35.23■■■■□ 3.23
RAB11FIP1-203ENST00000522727 PRXQ9BXM0 1461 aa35.22■■■■□ 3.23
RAB11FIP1-203ENST00000522727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.2■■■■□ 3.23
RAB11FIP1-203ENST00000522727 POLA1P09884 1462 aaPredicted RBP35.19■■■■□ 3.22
RAB11FIP1-203ENST00000522727 RAD54L2Q9Y4B4 1467 aa35.1■■■■□ 3.21
RAB11FIP1-203ENST00000522727 KIF27Q86VH2 1401 aa35.06■■■■□ 3.2
RAB11FIP1-203ENST00000522727 CUX2O14529 1486 aa35■■■■□ 3.19
RAB11FIP1-203ENST00000522727 TARBP1Q13395 1621 aaKnown RBP34.95■■■■□ 3.18
RAB11FIP1-203ENST00000522727 ABCA10Q8WWZ4 1543 aa34.93■■■■□ 3.18
RAB11FIP1-203ENST00000522727 TTBK1Q5TCY1 1321 aaPredicted RBP34.93■■■■□ 3.18
RAB11FIP1-203ENST00000522727 WDR97A6NE52 1622 aa34.91■■■■□ 3.18
RAB11FIP1-203ENST00000522727 APLP2Q06481 763 aa34.9■■■■□ 3.18
RAB11FIP1-203ENST00000522727 IFT140Q96RY7 1462 aa34.84■■■■□ 3.17
RAB11FIP1-203ENST00000522727 ARAP1Q96P48 1450 aa34.84■■■■□ 3.17
RAB11FIP1-203ENST00000522727 TDRD9Q8NDG6 1382 aaKnown RBP34.8■■■■□ 3.16
RAB11FIP1-203ENST00000522727 ZNF608Q9ULD9 1512 aaPredicted RBP34.73■■■■□ 3.15
RAB11FIP1-203ENST00000522727 ABCA5Q8WWZ7 1642 aa34.72■■■■□ 3.15
RAB11FIP1-203ENST00000522727 AQRO60306 1485 aaKnown RBP eCLIP34.68■■■■□ 3.142e-7■■□□□ 11.4
RAB11FIP1-203ENST00000522727 GAPVD1Q14C86 1478 aa34.67■■■■□ 3.14
RAB11FIP1-203ENST00000522727 IGF1RP08069 1367 aa34.64■■■■□ 3.14
RAB11FIP1-203ENST00000522727 EIF4G3O43432 1585 aaKnown RBP34.59■■■■□ 3.13
RAB11FIP1-203ENST00000522727 ARHGAP35Q9NRY4 1499 aa34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms