Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-4A0A0B4J246 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAV8-4A0A0B4J246 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAV8-4A0A0B4J246 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV8-4A0A0B4J246 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRAV8-4A0A0B4J246 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRAV8-4A0A0B4J246 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-4A0A0B4J246 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-4A0A0B4J246 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-4A0A0B4J246 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-4A0A0B4J246 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV8-4A0A0B4J246 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-4A0A0B4J246 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-4A0A0B4J246 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TRAV8-4A0A0B4J246 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV8-4A0A0B4J246 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRAV8-4A0A0B4J246 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-4A0A0B4J246 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV8-4A0A0B4J246 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRAV8-4A0A0B4J246 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-4A0A0B4J246 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAV8-4A0A0B4J246 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-4A0A0B4J246 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-4A0A0B4J246 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAV8-4A0A0B4J246 PKD1P6-201ENST00000343738 4769 ntBASIC16.61■□□□□ 0.25
TRAV8-4A0A0B4J246 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-4A0A0B4J246 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-4A0A0B4J246 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-4A0A0B4J246 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-4A0A0B4J246 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-4A0A0B4J246 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV8-4A0A0B4J246 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV8-4A0A0B4J246 AC126177.7-201ENST00000547904 679 ntBASIC16.6■□□□□ 0.25
TRAV8-4A0A0B4J246 MIR3648-2-201ENST00000581792 180 ntBASIC16.6■□□□□ 0.25
TRAV8-4A0A0B4J246 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
TRAV8-4A0A0B4J246 MIR3648-1-201ENST00000615959 180 ntBASIC16.6■□□□□ 0.25
TRAV8-4A0A0B4J246 CR559946.2-201ENST00000623684 991 ntBASIC16.6■□□□□ 0.25
TRAV8-4A0A0B4J246 GDI1-215ENST00000630693 786 ntTSL 4 BASIC16.6■□□□□ 0.25
TRAV8-4A0A0B4J246 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV8-4A0A0B4J246 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRAV8-4A0A0B4J246 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-4A0A0B4J246 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV8-4A0A0B4J246 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.58■□□□□ 0.25
TRAV8-4A0A0B4J246 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-4A0A0B4J246 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV8-4A0A0B4J246 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-4A0A0B4J246 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-4A0A0B4J246 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV8-4A0A0B4J246 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-4A0A0B4J246 AC133561.1-201ENST00000568600 2415 ntBASIC16.58■□□□□ 0.24
TRAV8-4A0A0B4J246 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRAV8-4A0A0B4J246 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
TRAV8-4A0A0B4J246 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-4A0A0B4J246 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV8-4A0A0B4J246 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-4A0A0B4J246 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV8-4A0A0B4J246 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.57■□□□□ 0.24
TRAV8-4A0A0B4J246 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-4A0A0B4J246 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRAV8-4A0A0B4J246 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-4A0A0B4J246 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-4A0A0B4J246 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-4A0A0B4J246 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAV8-4A0A0B4J246 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-4A0A0B4J246 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRAV8-4A0A0B4J246 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-4A0A0B4J246 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-4A0A0B4J246 HLA-V-202ENST00000446817 847 ntBASIC16.56■□□□□ 0.24
TRAV8-4A0A0B4J246 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TRAV8-4A0A0B4J246 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-4A0A0B4J246 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-4A0A0B4J246 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-4A0A0B4J246 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-4A0A0B4J246 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV8-4A0A0B4J246 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-4A0A0B4J246 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-4A0A0B4J246 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-4A0A0B4J246 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-4A0A0B4J246 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
TRAV8-4A0A0B4J246 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-4A0A0B4J246 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV8-4A0A0B4J246 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-4A0A0B4J246 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-4A0A0B4J246 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-4A0A0B4J246 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms