Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 AC092296.2-201ENST00000589470 999 ntBASIC23.9■■□□□ 1.42
CPNE9Q8IYJ1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CPNE9Q8IYJ1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CPNE9Q8IYJ1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
CPNE9Q8IYJ1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CPNE9Q8IYJ1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.89■■□□□ 1.42
CPNE9Q8IYJ1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.89■■□□□ 1.42
CPNE9Q8IYJ1 AC010501.1-201ENST00000606270 1962 ntBASIC23.89■■□□□ 1.42
CPNE9Q8IYJ1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.89■■□□□ 1.42
CPNE9Q8IYJ1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CPNE9Q8IYJ1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CPNE9Q8IYJ1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CPNE9Q8IYJ1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.89■■□□□ 1.41
CPNE9Q8IYJ1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
CPNE9Q8IYJ1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CPNE9Q8IYJ1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CPNE9Q8IYJ1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
CPNE9Q8IYJ1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
CPNE9Q8IYJ1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CPNE9Q8IYJ1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CPNE9Q8IYJ1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.88■■□□□ 1.41
CPNE9Q8IYJ1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CPNE9Q8IYJ1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CPNE9Q8IYJ1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CPNE9Q8IYJ1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CPNE9Q8IYJ1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CPNE9Q8IYJ1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.87■■□□□ 1.41
CPNE9Q8IYJ1 AC025884.2-201ENST00000553429 711 ntBASIC23.87■■□□□ 1.41
CPNE9Q8IYJ1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CPNE9Q8IYJ1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CPNE9Q8IYJ1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPNE9Q8IYJ1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.86■■□□□ 1.41
CPNE9Q8IYJ1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPNE9Q8IYJ1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CPNE9Q8IYJ1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPNE9Q8IYJ1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.85■■□□□ 1.41
CPNE9Q8IYJ1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.85■■□□□ 1.41
CPNE9Q8IYJ1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPNE9Q8IYJ1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CPNE9Q8IYJ1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.85■■□□□ 1.41
CPNE9Q8IYJ1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPNE9Q8IYJ1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.85■■□□□ 1.41
CPNE9Q8IYJ1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE9Q8IYJ1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE9Q8IYJ1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE9Q8IYJ1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE9Q8IYJ1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CPNE9Q8IYJ1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE9Q8IYJ1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE9Q8IYJ1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPNE9Q8IYJ1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CPNE9Q8IYJ1 SMPD5-203ENST00000639008 1464 ntBASIC23.83■■□□□ 1.41
CPNE9Q8IYJ1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.83■■□□□ 1.41
CPNE9Q8IYJ1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPNE9Q8IYJ1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPNE9Q8IYJ1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPNE9Q8IYJ1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CPNE9Q8IYJ1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
CPNE9Q8IYJ1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CPNE9Q8IYJ1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.82■■□□□ 1.4
CPNE9Q8IYJ1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CPNE9Q8IYJ1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CPNE9Q8IYJ1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.82■■□□□ 1.4
CPNE9Q8IYJ1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CPNE9Q8IYJ1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CPNE9Q8IYJ1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.82■■□□□ 1.4
CPNE9Q8IYJ1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CPNE9Q8IYJ1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CPNE9Q8IYJ1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CPNE9Q8IYJ1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPNE9Q8IYJ1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CPNE9Q8IYJ1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CPNE9Q8IYJ1 GPX1-201ENST00000419349 1106 ntBASIC23.81■■□□□ 1.4
CPNE9Q8IYJ1 ECEL1P2-201ENST00000461596 1295 ntBASIC23.81■■□□□ 1.4
CPNE9Q8IYJ1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPNE9Q8IYJ1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.81■■□□□ 1.4
CPNE9Q8IYJ1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPNE9Q8IYJ1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CPNE9Q8IYJ1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPNE9Q8IYJ1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.8■■□□□ 1.4
CPNE9Q8IYJ1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CPNE9Q8IYJ1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPNE9Q8IYJ1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.79■■□□□ 1.4
CPNE9Q8IYJ1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CPNE9Q8IYJ1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.79■■□□□ 1.4
CPNE9Q8IYJ1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.79■■□□□ 1.4
CPNE9Q8IYJ1 MIR3960-201ENST00000583311 91 ntBASIC23.79■■□□□ 1.4
CPNE9Q8IYJ1 AC096887.2-201ENST00000623443 1957 ntBASIC23.79■■□□□ 1.4
CPNE9Q8IYJ1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPNE9Q8IYJ1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CPNE9Q8IYJ1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPNE9Q8IYJ1 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.78■■□□□ 1.4
CPNE9Q8IYJ1 AC020928.2-201ENST00000588717 2197 ntBASIC23.78■■□□□ 1.4
CPNE9Q8IYJ1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPNE9Q8IYJ1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.78■■□□□ 1.4
CPNE9Q8IYJ1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CPNE9Q8IYJ1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CPNE9Q8IYJ1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CPNE9Q8IYJ1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.76■■□□□ 1.39
CPNE9Q8IYJ1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 606 ms