Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.6■■□□□ 1.05
CCL21O00585 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.6■■□□□ 1.05
CCL21O00585 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
CCL21O00585 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCL21O00585 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCL21O00585 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCL21O00585 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCL21O00585 KRT18P10-201ENST00000388836 1287 ntBASIC21.59■■□□□ 1.05
CCL21O00585 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCL21O00585 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
CCL21O00585 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
CCL21O00585 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CCL21O00585 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CCL21O00585 AC022616.5-201ENST00000518796 181 ntBASIC21.58■■□□□ 1.05
CCL21O00585 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCL21O00585 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
CCL21O00585 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCL21O00585 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCL21O00585 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.57■■□□□ 1.04
CCL21O00585 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCL21O00585 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.56■■□□□ 1.04
CCL21O00585 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CCL21O00585 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCL21O00585 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCL21O00585 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCL21O00585 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.56■■□□□ 1.04
CCL21O00585 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCL21O00585 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCL21O00585 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCL21O00585 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.56■■□□□ 1.04
CCL21O00585 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.55■■□□□ 1.04
CCL21O00585 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCL21O00585 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.55■■□□□ 1.04
CCL21O00585 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.55■■□□□ 1.04
CCL21O00585 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CCL21O00585 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.55■■□□□ 1.04
CCL21O00585 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCL21O00585 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCL21O00585 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCL21O00585 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CCL21O00585 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCL21O00585 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCL21O00585 MIR935-201ENST00000401179 91 ntBASIC21.54■■□□□ 1.04
CCL21O00585 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.54■■□□□ 1.04
CCL21O00585 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
CCL21O00585 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.53■■□□□ 1.04
CCL21O00585 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.53■■□□□ 1.04
CCL21O00585 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.53■■□□□ 1.04
CCL21O00585 KRT16P3-201ENST00000439127 1283 ntBASIC21.53■■□□□ 1.04
CCL21O00585 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL21O00585 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCL21O00585 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.52■■□□□ 1.04
CCL21O00585 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCL21O00585 ABCB10P1-201ENST00000614297 2181 ntBASIC21.52■■□□□ 1.04
CCL21O00585 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCL21O00585 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.52■■□□□ 1.03
CCL21O00585 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCL21O00585 UNC93B8-201ENST00000511903 705 ntBASIC21.51■■□□□ 1.03
CCL21O00585 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCL21O00585 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.51■■□□□ 1.03
CCL21O00585 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CCL21O00585 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL21O00585 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL21O00585 KRT18P24-201ENST00000344739 1156 ntBASIC21.5■■□□□ 1.03
CCL21O00585 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCL21O00585 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.5■■□□□ 1.03
CCL21O00585 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.5■■□□□ 1.03
CCL21O00585 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.5■■□□□ 1.03
CCL21O00585 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.5■■□□□ 1.03
CCL21O00585 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCL21O00585 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCL21O00585 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CCL21O00585 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CCL21O00585 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.49■■□□□ 1.03
CCL21O00585 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCL21O00585 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCL21O00585 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCL21O00585 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCL21O00585 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CCL21O00585 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CCL21O00585 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.48■■□□□ 1.03
CCL21O00585 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCL21O00585 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCL21O00585 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCL21O00585 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCL21O00585 TSPY9P-201ENST00000440215 945 ntBASIC21.47■■□□□ 1.03
CCL21O00585 TSPY11P-201ENST00000442607 1045 ntBASIC21.47■■□□□ 1.03
CCL21O00585 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCL21O00585 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCL21O00585 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCL21O00585 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCL21O00585 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCL21O00585 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.46■■□□□ 1.03
CCL21O00585 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.46■■□□□ 1.03
CCL21O00585 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CCL21O00585 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.45■■□□□ 1.02
CCL21O00585 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCL21O00585 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCL21O00585 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.44■■□□□ 1.02
CCL21O00585 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms