Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LINC00862A6NCI5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.9■□□□□ 0.78
LINC00862A6NCI5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.9■□□□□ 0.78
LINC00862A6NCI5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.9■□□□□ 0.78
LINC00862A6NCI5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINC00862A6NCI5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LINC00862A6NCI5 LINC01124-201ENST00000409786 2117 ntBASIC19.89■□□□□ 0.77
LINC00862A6NCI5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.88■□□□□ 0.77
LINC00862A6NCI5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00862A6NCI5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00862A6NCI5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00862A6NCI5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00862A6NCI5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00862A6NCI5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.88■□□□□ 0.77
LINC00862A6NCI5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00862A6NCI5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00862A6NCI5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00862A6NCI5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC00862A6NCI5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC00862A6NCI5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LINC00862A6NCI5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC00862A6NCI5 AC096887.2-201ENST00000623443 1957 ntBASIC19.86■□□□□ 0.77
LINC00862A6NCI5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC00862A6NCI5 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC00862A6NCI5 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LINC00862A6NCI5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC00862A6NCI5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
LINC00862A6NCI5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00862A6NCI5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00862A6NCI5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00862A6NCI5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00862A6NCI5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00862A6NCI5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00862A6NCI5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.84■□□□□ 0.77
LINC00862A6NCI5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00862A6NCI5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LINC00862A6NCI5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LINC00862A6NCI5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LINC00862A6NCI5 EP400NL-214ENST00000641289 2402 ntBASIC19.83■□□□□ 0.76
LINC00862A6NCI5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LINC00862A6NCI5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.82■□□□□ 0.76
LINC00862A6NCI5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LINC00862A6NCI5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.82■□□□□ 0.76
LINC00862A6NCI5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LINC00862A6NCI5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LINC00862A6NCI5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LINC00862A6NCI5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
LINC00862A6NCI5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LINC00862A6NCI5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LINC00862A6NCI5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00862A6NCI5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.81■□□□□ 0.76
LINC00862A6NCI5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
LINC00862A6NCI5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LINC00862A6NCI5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.81■□□□□ 0.76
LINC00862A6NCI5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
LINC00862A6NCI5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00862A6NCI5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00862A6NCI5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00862A6NCI5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.81■□□□□ 0.76
LINC00862A6NCI5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.81■□□□□ 0.76
LINC00862A6NCI5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00862A6NCI5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00862A6NCI5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LINC00862A6NCI5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.8■□□□□ 0.76
LINC00862A6NCI5 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.8■□□□□ 0.76
LINC00862A6NCI5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00862A6NCI5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00862A6NCI5 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00862A6NCI5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00862A6NCI5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.8■□□□□ 0.76
LINC00862A6NCI5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00862A6NCI5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00862A6NCI5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LINC00862A6NCI5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
LINC00862A6NCI5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00862A6NCI5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00862A6NCI5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LINC00862A6NCI5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00862A6NCI5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00862A6NCI5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.79■□□□□ 0.76
LINC00862A6NCI5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00862A6NCI5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.78■□□□□ 0.76
LINC00862A6NCI5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00862A6NCI5 AP004609.3-201ENST00000610705 1884 ntBASIC19.78■□□□□ 0.76
LINC00862A6NCI5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00862A6NCI5 WHAMMP2-203ENST00000563942 1603 ntBASIC19.78■□□□□ 0.76
LINC00862A6NCI5 AC137767.1-201ENST00000602918 1920 ntBASIC19.78■□□□□ 0.76
LINC00862A6NCI5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.78■□□□□ 0.76
LINC00862A6NCI5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00862A6NCI5 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.77■□□□□ 0.76
LINC00862A6NCI5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.77■□□□□ 0.76
LINC00862A6NCI5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC00862A6NCI5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LINC00862A6NCI5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LINC00862A6NCI5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LINC00862A6NCI5 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00862A6NCI5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00862A6NCI5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00862A6NCI5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LINC00862A6NCI5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms