RNA–Protein interactions for RNA: ENST00000255641.12

CSNK1G2-201, Transcript of casein kinase 1 gamma 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1G2, Length 2,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G2-201ENST00000255641 NISCHQ9Y2I1 1504 aa42.44■■■■■ 4.38
CSNK1G2-201ENST00000255641 SHROOM4Q9ULL8 1493 aa36.96■■■■□ 3.51
CSNK1G2-201ENST00000255641 SUPT5HO00267 1087 aaKnown RBP36.53■■■■□ 3.44
CSNK1G2-201ENST00000255641 CCDC180Q9P1Z9 1646 aa36.15■■■■□ 3.38
CSNK1G2-201ENST00000255641 DCAF8L2P0C7V8 631 aa36.12■■■■□ 3.37
CSNK1G2-201ENST00000255641 ZCCHC6Q5VYS8 1495 aaKnown RBP35.69■■■■□ 3.3
CSNK1G2-201ENST00000255641 MYO15BQ96JP2 1530 aa35.65■■■■□ 3.3
CSNK1G2-201ENST00000255641 HRCP23327 699 aa35.61■■■■□ 3.29
CSNK1G2-201ENST00000255641 PCGF6Q9BYE7 350 aa35.48■■■■□ 3.27
CSNK1G2-201ENST00000255641 CHIC1Q5VXU3 224 aa35.46■■■■□ 3.27
CSNK1G2-201ENST00000255641 PPARGC1BQ86YN6 1023 aaKnown RBP35.39■■■■□ 3.26
CSNK1G2-201ENST00000255641 LOC105371045A0A1W2PR82 267 aa34.88■■■■□ 3.18
CSNK1G2-201ENST00000255641 ABCC9O60706 1549 aa34.69■■■■□ 3.14
CSNK1G2-201ENST00000255641 DCAF1Q9Y4B6 1507 aa34.53■■■■□ 3.12
CSNK1G2-201ENST00000255641 SCRIBQ14160 1630 aa34.21■■■■□ 3.07
CSNK1G2-201ENST00000255641 TRIM26Q12899 539 aaPredicted RBP34.14■■■■□ 3.06
CSNK1G2-201ENST00000255641 EHMT2Q96KQ7 1210 aa34.04■■■■□ 3.04
CSNK1G2-201ENST00000255641 FAM9AQ8IZU1 332 aaPredicted RBP33.92■■■■□ 3.02
CSNK1G2-201ENST00000255641 NACADO15069 1562 aa33.7■■■□□ 2.99
CSNK1G2-201ENST00000255641 TRIM41Q8WV44 630 aa33.6■■■□□ 2.97
CSNK1G2-201ENST00000255641 SCAF1Q9H7N4 1312 aaKnown RBP33.56■■■□□ 2.96
CSNK1G2-201ENST00000255641 RSF1Q96T23 1441 aaPredicted RBP33.42■■■□□ 2.94
CSNK1G2-201ENST00000255641 ZEB1P37275 1124 aaPredicted RBP33.41■■■□□ 2.94
CSNK1G2-201ENST00000255641 CECR2Q9BXF3 1484 aa33.38■■■□□ 2.93
CSNK1G2-201ENST00000255641 RB1CC1Q8TDY2 1594 aa33.38■■■□□ 2.93
CSNK1G2-201ENST00000255641 PABPN1Q86U42 306 aaKnown RBP eCLIP33.21■■■□□ 2.913e-8■□□□□ 9.6
CSNK1G2-201ENST00000255641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.14■■■□□ 2.9
CSNK1G2-201ENST00000255641 MROH2BQ7Z745 1585 aa33.1■■■□□ 2.89
CSNK1G2-201ENST00000255641 TTBK1Q5TCY1 1321 aaPredicted RBP33.04■■■□□ 2.88
CSNK1G2-201ENST00000255641 PELP1Q8IZL8 1130 aaKnown RBP33.01■■■□□ 2.88
CSNK1G2-201ENST00000255641 UNC13AQ9UPW8 1703 aa32.9■■■□□ 2.86
CSNK1G2-201ENST00000255641 CCER1Q8TC90 406 aaPredicted RBP32.89■■■□□ 2.86
CSNK1G2-201ENST00000255641 WIZO95785 1651 aa32.89■■■□□ 2.86
CSNK1G2-201ENST00000255641 NEUROD1Q13562 356 aa32.88■■■□□ 2.85
CSNK1G2-201ENST00000255641 ACIN1Q9UKV3 1341 aaKnown RBP32.74■■■□□ 2.83
CSNK1G2-201ENST00000255641 GTF3C3Q9Y5Q9 886 aa32.62■■■□□ 2.81
CSNK1G2-201ENST00000255641 BAZ1AQ9NRL2 1556 aaPredicted RBP32.6■■■□□ 2.81
CSNK1G2-201ENST00000255641 DIEXFQ68CQ4 756 aaKnown RBP32.58■■■□□ 2.81
CSNK1G2-201ENST00000255641 BICRAQ9NZM4 1560 aa32.56■■■□□ 2.8
CSNK1G2-201ENST00000255641 SMARCA4P51532 1647 aa32.45■■■□□ 2.79
CSNK1G2-201ENST00000255641 YTHDC1Q96MU7 727 aaKnown RBP32.34■■■□□ 2.77
CSNK1G2-201ENST00000255641 CENPBP07199 599 aaPredicted RBP32.28■■■□□ 2.76
CSNK1G2-201ENST00000255641 CCDC88BA6NC98 1476 aa32.19■■■□□ 2.74
CSNK1G2-201ENST00000255641 TOP2AP11388 1531 aaKnown RBP32.17■■■□□ 2.74
CSNK1G2-201ENST00000255641 ABCC8Q09428 1581 aa32.15■■■□□ 2.74
CSNK1G2-201ENST00000255641 CEP162Q5TB80 1403 aa32.06■■■□□ 2.72
CSNK1G2-201ENST00000255641 SMARCA2P51531 1590 aa32.04■■■□□ 2.72
CSNK1G2-201ENST00000255641 UBTFP17480 764 aaKnown RBP32.04■■■□□ 2.72
CSNK1G2-201ENST00000255641 SOGA1O94964 1423 aa32.03■■■□□ 2.72
CSNK1G2-201ENST00000255641 ZNF316A6NFI3 1004 aaPredicted RBP31.99■■■□□ 2.71
CSNK1G2-201ENST00000255641 HNRNPUL2Q1KMD3 747 aaKnown RBP31.97■■■□□ 2.71
CSNK1G2-201ENST00000255641 MIER1Q8N108 512 aa31.92■■■□□ 2.7
CSNK1G2-201ENST00000255641 RUSC2Q8N2Y8 1516 aa31.91■■■□□ 2.7
CSNK1G2-201ENST00000255641 EIF4G1Q04637 1599 aaKnown RBP31.91■■■□□ 2.7
CSNK1G2-201ENST00000255641 ATAD2BQ9ULI0 1458 aa31.87■■■□□ 2.69
CSNK1G2-201ENST00000255641 WRNQ14191 1432 aaPredicted RBP eCLIP31.84■■■□□ 2.69
CSNK1G2-201ENST00000255641 RANGAP1P46060 587 aaPredicted RBP31.79■■■□□ 2.68
CSNK1G2-201ENST00000255641 BAZ1BQ9UIG0 1483 aaKnown RBP31.78■■■□□ 2.68
CSNK1G2-201ENST00000255641 CSRNP3Q8WYN3 585 aa31.78■■■□□ 2.68
CSNK1G2-201ENST00000255641 TNIKQ9UKE5 1360 aa31.73■■■□□ 2.67
CSNK1G2-201ENST00000255641 PEG3Q9GZU2 1588 aa31.67■■■□□ 2.66
CSNK1G2-201ENST00000255641 GOLGA3Q08378 1498 aa31.42■■■□□ 2.62
CSNK1G2-201ENST00000255641 MYT1Q01538 1121 aa31.34■■■□□ 2.61
CSNK1G2-201ENST00000255641 CLIP1P30622 1438 aa31.29■■■□□ 2.6
CSNK1G2-201ENST00000255641 SYNJ1O43426 1573 aa31.29■■■□□ 2.6
CSNK1G2-201ENST00000255641 APLP2Q06481 763 aa31.28■■■□□ 2.6
CSNK1G2-201ENST00000255641 EEA1Q15075 1411 aa31.27■■■□□ 2.6
CSNK1G2-201ENST00000255641 NCAPD3P42695 1498 aa31.27■■■□□ 2.6
CSNK1G2-201ENST00000255641 HMGXB3Q12766 1538 aa31.11■■■□□ 2.57
CSNK1G2-201ENST00000255641 CEP164Q9UPV0 1460 aa31.11■■■□□ 2.57
CSNK1G2-201ENST00000255641 RAPGEF2Q9Y4G8 1499 aa31.1■■■□□ 2.57
CSNK1G2-201ENST00000255641 VPS8Q8N3P4 1428 aa31.1■■■□□ 2.57
CSNK1G2-201ENST00000255641 SUPT16HQ9Y5B9 1047 aaKnown RBP31.09■■■□□ 2.57
CSNK1G2-201ENST00000255641 CC2D2AQ9P2K1 1620 aa31.02■■■□□ 2.56
CSNK1G2-201ENST00000255641 ITGAEP38570 1179 aa30.99■■■□□ 2.55
CSNK1G2-201ENST00000255641 KANK4Q5T7N3 995 aaPredicted RBP30.98■■■□□ 2.55
CSNK1G2-201ENST00000255641 KCNH8Q96L42 1107 aa30.98■■■□□ 2.55
CSNK1G2-201ENST00000255641 DHX57Q6P158 1386 aaKnown RBP30.96■■■□□ 2.55
CSNK1G2-201ENST00000255641 DNAJC5BQ9UF47 199 aa30.91■■■□□ 2.54
CSNK1G2-201ENST00000255641 KIF21BO75037 1637 aa30.91■■■□□ 2.54
CSNK1G2-201ENST00000255641 BCANQ96GW7 911 aa30.87■■■□□ 2.53
CSNK1G2-201ENST00000255641 CFTRP13569 1480 aa30.87■■■□□ 2.53
CSNK1G2-201ENST00000255641 TOP2BQ02880 1626 aa30.82■■■□□ 2.52
CSNK1G2-201ENST00000255641 CUX1P39880 1505 aa30.81■■■□□ 2.52
CSNK1G2-201ENST00000255641 TSHZ2Q9NRE2 1034 aa30.81■■■□□ 2.52
CSNK1G2-201ENST00000255641 CADPSQ9ULU8 1353 aa30.75■■■□□ 2.51
CSNK1G2-201ENST00000255641 NESP48681 1621 aa30.68■■■□□ 2.5
CSNK1G2-201ENST00000255641 BIVM-ERCC5R4GMW8 1640 aa30.64■■■□□ 2.5
CSNK1G2-201ENST00000255641 ARAP1Q96P48 1450 aa30.63■■■□□ 2.49
CSNK1G2-201ENST00000255641 HIRIP3Q9BW71 556 aaPredicted RBP30.58■■■□□ 2.49
CSNK1G2-201ENST00000255641 CLSPNQ9HAW4 1339 aa30.58■■■□□ 2.49
CSNK1G2-201ENST00000255641 DDX10Q13206 875 aaKnown RBP30.53■■■□□ 2.48
CSNK1G2-201ENST00000255641 FKBP8Q14318 412 aa30.51■■■□□ 2.47
CSNK1G2-201ENST00000255641 KIF27Q86VH2 1401 aa30.49■■■□□ 2.47
CSNK1G2-201ENST00000255641 FANCD2Q9BXW9 1451 aa30.48■■■□□ 2.47
CSNK1G2-201ENST00000255641 SIN3AQ96ST3 1273 aa30.47■■■□□ 2.47
CSNK1G2-201ENST00000255641 CUX2O14529 1486 aa30.46■■■□□ 2.47
CSNK1G2-201ENST00000255641 ANP32EQ9BTT0 268 aa30.45■■■□□ 2.46
CSNK1G2-201ENST00000255641 CCNB3Q8WWL7 1395 aa30.44■■■□□ 2.46
CSNK1G2-201ENST00000255641 FGD5Q6ZNL6 1462 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms