RNA–Protein interactions for RNA: ENST00000369077.3

MCMBP-202, Transcript of minichromosome maintenance complex binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MCMBP, Length 2,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCMBP-202ENST00000369077 NISCHQ9Y2I1 1504 aa45.06■■■■■ 4.8
MCMBP-202ENST00000369077 SHROOM4Q9ULL8 1493 aa38.94■■■■□ 3.82
MCMBP-202ENST00000369077 SUPT5HO00267 1087 aaKnown RBP38.22■■■■□ 3.71
MCMBP-202ENST00000369077 ZCCHC6Q5VYS8 1495 aaKnown RBP38.08■■■■□ 3.69
MCMBP-202ENST00000369077 CCDC180Q9P1Z9 1646 aa38.06■■■■□ 3.68
MCMBP-202ENST00000369077 DCAF8L2P0C7V8 631 aa37.89■■■■□ 3.66
MCMBP-202ENST00000369077 CHIC1Q5VXU3 224 aa36.99■■■■□ 3.51
MCMBP-202ENST00000369077 MYO15BQ96JP2 1530 aa36.88■■■■□ 3.49
MCMBP-202ENST00000369077 DCAF1Q9Y4B6 1507 aa36.74■■■■□ 3.47
MCMBP-202ENST00000369077 LOC105371045A0A1W2PR82 267 aa36.1■■■■□ 3.37
MCMBP-202ENST00000369077 PCGF6Q9BYE7 350 aa36.1■■■■□ 3.37
MCMBP-202ENST00000369077 SCRIBQ14160 1630 aa36.04■■■■□ 3.36
MCMBP-202ENST00000369077 HRCP23327 699 aa35.95■■■■□ 3.35
MCMBP-202ENST00000369077 ABCC9O60706 1549 aa35.93■■■■□ 3.34
MCMBP-202ENST00000369077 RSF1Q96T23 1441 aaPredicted RBP35.78■■■■□ 3.32
MCMBP-202ENST00000369077 PPARGC1BQ86YN6 1023 aaKnown RBP35.46■■■■□ 3.27
MCMBP-202ENST00000369077 TRIM41Q8WV44 630 aa35.45■■■■□ 3.27
MCMBP-202ENST00000369077 RB1CC1Q8TDY2 1594 aa35.44■■■■□ 3.26
MCMBP-202ENST00000369077 FAM9AQ8IZU1 332 aaPredicted RBP35.39■■■■□ 3.26
MCMBP-202ENST00000369077 CECR2Q9BXF3 1484 aa35.32■■■■□ 3.24
MCMBP-202ENST00000369077 EHMT2Q96KQ7 1210 aa35.27■■■■□ 3.24
MCMBP-202ENST00000369077 NACADO15069 1562 aa35.26■■■■□ 3.24
MCMBP-202ENST00000369077 TRIM26Q12899 539 aaPredicted RBP35.19■■■■□ 3.22
MCMBP-202ENST00000369077 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
MCMBP-202ENST00000369077 WIZO95785 1651 aa34.97■■■■□ 3.19
MCMBP-202ENST00000369077 BAZ1AQ9NRL2 1556 aaPredicted RBP34.58■■■■□ 3.13
MCMBP-202ENST00000369077 ZEB1P37275 1124 aaPredicted RBP34.32■■■■□ 3.09
MCMBP-202ENST00000369077 EIF4G1Q04637 1599 aaKnown RBP34.32■■■■□ 3.08
MCMBP-202ENST00000369077 ABCC8Q09428 1581 aa34.3■■■■□ 3.08
MCMBP-202ENST00000369077 SMARCA4P51532 1647 aa34.29■■■■□ 3.08
MCMBP-202ENST00000369077 CCDC88BA6NC98 1476 aa34.27■■■■□ 3.08
MCMBP-202ENST00000369077 TOP2AP11388 1531 aaKnown RBP34.27■■■■□ 3.08
MCMBP-202ENST00000369077 PABPN1Q86U42 306 aaKnown RBP eCLIP34.26■■■■□ 3.08
MCMBP-202ENST00000369077 UNC13AQ9UPW8 1703 aa34.24■■■■□ 3.07
MCMBP-202ENST00000369077 SMARCA2P51531 1590 aa34.14■■■■□ 3.06
MCMBP-202ENST00000369077 TTBK1Q5TCY1 1321 aaPredicted RBP34.11■■■■□ 3.05
MCMBP-202ENST00000369077 SOGA1O94964 1423 aa34.01■■■■□ 3.03
MCMBP-202ENST00000369077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.98■■■■□ 3.03
MCMBP-202ENST00000369077 BICRAQ9NZM4 1560 aa33.86■■■■□ 3.01
MCMBP-202ENST00000369077 RUSC2Q8N2Y8 1516 aa33.86■■■■□ 3.01
MCMBP-202ENST00000369077 UBTFP17480 764 aaKnown RBP33.83■■■■□ 3.01
MCMBP-202ENST00000369077 CCER1Q8TC90 406 aaPredicted RBP33.83■■■■□ 3.01
MCMBP-202ENST00000369077 CEP162Q5TB80 1403 aa33.82■■■■□ 3
MCMBP-202ENST00000369077 CSRNP3Q8WYN3 585 aa33.8■■■■□ 3
MCMBP-202ENST00000369077 TNIKQ9UKE5 1360 aa33.67■■■□□ 2.98
MCMBP-202ENST00000369077 WRNQ14191 1432 aaPredicted RBP eCLIP33.62■■■□□ 2.97
MCMBP-202ENST00000369077 EEA1Q15075 1411 aa33.56■■■□□ 2.96
MCMBP-202ENST00000369077 PEG3Q9GZU2 1588 aa33.47■■■□□ 2.95
MCMBP-202ENST00000369077 GOLGA3Q08378 1498 aa33.47■■■□□ 2.95
MCMBP-202ENST00000369077 ATAD2BQ9ULI0 1458 aa33.44■■■□□ 2.94
MCMBP-202ENST00000369077 SYNJ1O43426 1573 aa33.43■■■□□ 2.94
MCMBP-202ENST00000369077 BAZ1BQ9UIG0 1483 aaKnown RBP33.39■■■□□ 2.94
MCMBP-202ENST00000369077 RANGAP1P46060 587 aaPredicted RBP33.39■■■□□ 2.94
MCMBP-202ENST00000369077 SCAF1Q9H7N4 1312 aaKnown RBP33.26■■■□□ 2.92
MCMBP-202ENST00000369077 CEP164Q9UPV0 1460 aa33.25■■■□□ 2.91
MCMBP-202ENST00000369077 HNRNPUL2Q1KMD3 747 aaKnown RBP33.19■■■□□ 2.9
MCMBP-202ENST00000369077 CLIP1P30622 1438 aa33.18■■■□□ 2.9
MCMBP-202ENST00000369077 DIEXFQ68CQ4 756 aaKnown RBP33.15■■■□□ 2.9
MCMBP-202ENST00000369077 RAPGEF2Q9Y4G8 1499 aa33.13■■■□□ 2.89
MCMBP-202ENST00000369077 KIF21BO75037 1637 aa33.11■■■□□ 2.89
MCMBP-202ENST00000369077 PELP1Q8IZL8 1130 aaKnown RBP33.02■■■□□ 2.88
MCMBP-202ENST00000369077 APLP2Q06481 763 aa33.02■■■□□ 2.88
MCMBP-202ENST00000369077 VPS8Q8N3P4 1428 aa32.97■■■□□ 2.87
MCMBP-202ENST00000369077 NEUROD1Q13562 356 aa32.91■■■□□ 2.86
MCMBP-202ENST00000369077 TOP2BQ02880 1626 aa32.91■■■□□ 2.86
MCMBP-202ENST00000369077 ACIN1Q9UKV3 1341 aaKnown RBP32.86■■■□□ 2.85
MCMBP-202ENST00000369077 ZNF316A6NFI3 1004 aaPredicted RBP32.83■■■□□ 2.85
MCMBP-202ENST00000369077 BIVM-ERCC5R4GMW8 1640 aa32.72■■■□□ 2.83
MCMBP-202ENST00000369077 NCAPD3P42695 1498 aa32.7■■■□□ 2.83
MCMBP-202ENST00000369077 CUX1P39880 1505 aa32.68■■■□□ 2.82
MCMBP-202ENST00000369077 PRXQ9BXM0 1461 aa32.65■■■□□ 2.82
MCMBP-202ENST00000369077 CENPBP07199 599 aaPredicted RBP32.63■■■□□ 2.81
MCMBP-202ENST00000369077 KANK4Q5T7N3 995 aaPredicted RBP32.62■■■□□ 2.81
MCMBP-202ENST00000369077 HMGXB3Q12766 1538 aa32.62■■■□□ 2.81
MCMBP-202ENST00000369077 GTF3C3Q9Y5Q9 886 aa32.59■■■□□ 2.81
MCMBP-202ENST00000369077 YTHDC1Q96MU7 727 aaKnown RBP32.58■■■□□ 2.81
MCMBP-202ENST00000369077 ARAP1Q96P48 1450 aa32.58■■■□□ 2.81
MCMBP-202ENST00000369077 ERICH3Q5RHP9 1530 aa32.56■■■□□ 2.8
MCMBP-202ENST00000369077 KIF27Q86VH2 1401 aa32.55■■■□□ 2.8
MCMBP-202ENST00000369077 CFTRP13569 1480 aa32.5■■■□□ 2.79
MCMBP-202ENST00000369077 MIER1Q8N108 512 aa32.48■■■□□ 2.79
MCMBP-202ENST00000369077 ITGAEP38570 1179 aa32.36■■■□□ 2.77
MCMBP-202ENST00000369077 DHX57Q6P158 1386 aaKnown RBP32.31■■■□□ 2.76
MCMBP-202ENST00000369077 CUX2O14529 1486 aa32.3■■■□□ 2.76
MCMBP-202ENST00000369077 ARHGAP35Q9NRY4 1499 aa32.3■■■□□ 2.76
MCMBP-202ENST00000369077 IGF1RP08069 1367 aa32.23■■■□□ 2.75
MCMBP-202ENST00000369077 CADPSQ9ULU8 1353 aa32.19■■■□□ 2.74
MCMBP-202ENST00000369077 RRBP1Q9P2E9 1410 aaKnown RBP32.16■■■□□ 2.74
MCMBP-202ENST00000369077 CCNB3Q8WWL7 1395 aa32.14■■■□□ 2.74
MCMBP-202ENST00000369077 P3H3Q8IVL6 736 aa32.12■■■□□ 2.73
MCMBP-202ENST00000369077 CARMIL1Q5VZK9 1371 aa32.12■■■□□ 2.73
MCMBP-202ENST00000369077 FGD5Q6ZNL6 1462 aa32.12■■■□□ 2.73
MCMBP-202ENST00000369077 CLSPNQ9HAW4 1339 aa32.1■■■□□ 2.73
MCMBP-202ENST00000369077 ATP1B4Q9UN42 357 aaPredicted RBP32.07■■■□□ 2.72
MCMBP-202ENST00000369077 CC2D2AQ9P2K1 1620 aa32.05■■■□□ 2.72
MCMBP-202ENST00000369077 PRDM2Q13029 1718 aa32.05■■■□□ 2.72
MCMBP-202ENST00000369077 FAM50AQ14320 339 aaKnown RBP31.92■■■□□ 2.7
MCMBP-202ENST00000369077 RAB3GAP2Q9H2M9 1393 aa31.91■■■□□ 2.7
MCMBP-202ENST00000369077 FANCD2Q9BXW9 1451 aa31.91■■■□□ 2.7
MCMBP-202ENST00000369077 TIAM1Q13009 1591 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms