RNA–Protein interactions for RNA: ENST00000564784.5

NEIL1-206, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 2,019 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-206ENST00000564784 NISCHQ9Y2I1 1504 aa45.19■■■■■ 4.83
NEIL1-206ENST00000564784 CCDC180Q9P1Z9 1646 aa38.52■■■■□ 3.76
NEIL1-206ENST00000564784 ZCCHC6Q5VYS8 1495 aaKnown RBP38.28■■■■□ 3.72
NEIL1-206ENST00000564784 SHROOM4Q9ULL8 1493 aa38.2■■■■□ 3.71
NEIL1-206ENST00000564784 SUPT5HO00267 1087 aaKnown RBP37.51■■■■□ 3.59
NEIL1-206ENST00000564784 DCAF1Q9Y4B6 1507 aa37.25■■■■□ 3.55
NEIL1-206ENST00000564784 DCAF8L2P0C7V8 631 aa36.95■■■■□ 3.51
NEIL1-206ENST00000564784 CHIC1Q5VXU3 224 aa36.73■■■■□ 3.47
NEIL1-206ENST00000564784 MYO15BQ96JP2 1530 aa36.61■■■■□ 3.45
NEIL1-206ENST00000564784 ABCC9O60706 1549 aa36.13■■■■□ 3.37
NEIL1-206ENST00000564784 SCRIBQ14160 1630 aa35.85■■■■□ 3.33
NEIL1-206ENST00000564784 HRCP23327 699 aa35.75■■■■□ 3.31
NEIL1-206ENST00000564784 RSF1Q96T23 1441 aaPredicted RBP35.74■■■■□ 3.31
NEIL1-206ENST00000564784 NACADO15069 1562 aa35.53■■■■□ 3.28
NEIL1-206ENST00000564784 LOC105371045A0A1W2PR82 267 aa35.5■■■■□ 3.27
NEIL1-206ENST00000564784 PCGF6Q9BYE7 350 aa35.5■■■■□ 3.27
NEIL1-206ENST00000564784 RB1CC1Q8TDY2 1594 aa35.43■■■■□ 3.26
NEIL1-206ENST00000564784 CECR2Q9BXF3 1484 aa35.13■■■■□ 3.21
NEIL1-206ENST00000564784 MROH2BQ7Z745 1585 aa35.07■■■■□ 3.21
NEIL1-206ENST00000564784 TRIM41Q8WV44 630 aa35.04■■■■□ 3.2
NEIL1-206ENST00000564784 TRIM26Q12899 539 aaPredicted RBP34.98■■■■□ 3.19
NEIL1-206ENST00000564784 WIZO95785 1651 aa34.89■■■■□ 3.18
NEIL1-206ENST00000564784 PPARGC1BQ86YN6 1023 aaKnown RBP34.79■■■■□ 3.16
NEIL1-206ENST00000564784 BAZ1AQ9NRL2 1556 aaPredicted RBP34.78■■■■□ 3.16
NEIL1-206ENST00000564784 EIF4G1Q04637 1599 aaKnown RBP34.63■■■■□ 3.13
NEIL1-206ENST00000564784 FAM9AQ8IZU1 332 aaPredicted RBP34.59■■■■□ 3.13
NEIL1-206ENST00000564784 TOP2AP11388 1531 aaKnown RBP34.43■■■■□ 3.1
NEIL1-206ENST00000564784 SMARCA4P51532 1647 aa34.4■■■■□ 3.1
NEIL1-206ENST00000564784 UNC13AQ9UPW8 1703 aa34.4■■■■□ 3.1
NEIL1-206ENST00000564784 ZEB1P37275 1124 aaPredicted RBP34.32■■■■□ 3.08
NEIL1-206ENST00000564784 SMARCA2P51531 1590 aa34.23■■■■□ 3.07
NEIL1-206ENST00000564784 CCDC88BA6NC98 1476 aa34.21■■■■□ 3.07
NEIL1-206ENST00000564784 EHMT2Q96KQ7 1210 aa34.13■■■■□ 3.05
NEIL1-206ENST00000564784 ABCC8Q09428 1581 aa34.06■■■■□ 3.04
NEIL1-206ENST00000564784 BICRAQ9NZM4 1560 aa33.95■■■■□ 3.03
NEIL1-206ENST00000564784 PEG3Q9GZU2 1588 aa33.86■■■■□ 3.01
NEIL1-206ENST00000564784 WRNQ14191 1432 aaPredicted RBP eCLIP33.82■■■■□ 3.01
NEIL1-206ENST00000564784 EEA1Q15075 1411 aa33.78■■■■□ 3
NEIL1-206ENST00000564784 SOGA1O94964 1423 aa33.76■■■□□ 2.99
NEIL1-206ENST00000564784 TNIKQ9UKE5 1360 aa33.71■■■□□ 2.99
NEIL1-206ENST00000564784 CEP162Q5TB80 1403 aa33.68■■■□□ 2.98
NEIL1-206ENST00000564784 PABPN1Q86U42 306 aaKnown RBP eCLIP33.63■■■□□ 2.97
NEIL1-206ENST00000564784 CSRNP3Q8WYN3 585 aa33.59■■■□□ 2.97
NEIL1-206ENST00000564784 RUSC2Q8N2Y8 1516 aa33.59■■■□□ 2.97
NEIL1-206ENST00000564784 GOLGA3Q08378 1498 aa33.47■■■□□ 2.95
NEIL1-206ENST00000564784 ATAD2BQ9ULI0 1458 aa33.46■■■□□ 2.95
NEIL1-206ENST00000564784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.41■■■□□ 2.94
NEIL1-206ENST00000564784 SYNJ1O43426 1573 aa33.41■■■□□ 2.94
NEIL1-206ENST00000564784 CCER1Q8TC90 406 aaPredicted RBP33.35■■■□□ 2.93
NEIL1-206ENST00000564784 KIF21BO75037 1637 aa33.34■■■□□ 2.93
NEIL1-206ENST00000564784 BAZ1BQ9UIG0 1483 aaKnown RBP33.32■■■□□ 2.92
NEIL1-206ENST00000564784 UBTFP17480 764 aaKnown RBP33.31■■■□□ 2.92
NEIL1-206ENST00000564784 CEP164Q9UPV0 1460 aa33.28■■■□□ 2.92
NEIL1-206ENST00000564784 TTBK1Q5TCY1 1321 aaPredicted RBP33.09■■■□□ 2.89
NEIL1-206ENST00000564784 TOP2BQ02880 1626 aa33.06■■■□□ 2.88
NEIL1-206ENST00000564784 CLIP1P30622 1438 aa33.03■■■□□ 2.88
NEIL1-206ENST00000564784 BIVM-ERCC5R4GMW8 1640 aa33■■■□□ 2.87
NEIL1-206ENST00000564784 VPS8Q8N3P4 1428 aa32.96■■■□□ 2.87
NEIL1-206ENST00000564784 RAPGEF2Q9Y4G8 1499 aa32.96■■■□□ 2.87
NEIL1-206ENST00000564784 SCAF1Q9H7N4 1312 aaKnown RBP32.9■■■□□ 2.86
NEIL1-206ENST00000564784 HMGXB3Q12766 1538 aa32.89■■■□□ 2.86
NEIL1-206ENST00000564784 NCAPD3P42695 1498 aa32.85■■■□□ 2.85
NEIL1-206ENST00000564784 ERICH3Q5RHP9 1530 aa32.8■■■□□ 2.84
NEIL1-206ENST00000564784 DIEXFQ68CQ4 756 aaKnown RBP32.79■■■□□ 2.84
NEIL1-206ENST00000564784 PRXQ9BXM0 1461 aa32.75■■■□□ 2.83
NEIL1-206ENST00000564784 CUX1P39880 1505 aa32.66■■■□□ 2.82
NEIL1-206ENST00000564784 ACIN1Q9UKV3 1341 aaKnown RBP32.63■■■□□ 2.81
NEIL1-206ENST00000564784 ZNF316A6NFI3 1004 aaPredicted RBP32.61■■■□□ 2.81
NEIL1-206ENST00000564784 APLP2Q06481 763 aa32.6■■■□□ 2.81
NEIL1-206ENST00000564784 HNRNPUL2Q1KMD3 747 aaKnown RBP32.59■■■□□ 2.81
NEIL1-206ENST00000564784 CFTRP13569 1480 aa32.58■■■□□ 2.81
NEIL1-206ENST00000564784 ARAP1Q96P48 1450 aa32.56■■■□□ 2.8
NEIL1-206ENST00000564784 NEUROD1Q13562 356 aa32.52■■■□□ 2.8
NEIL1-206ENST00000564784 KIF27Q86VH2 1401 aa32.5■■■□□ 2.79
NEIL1-206ENST00000564784 PRDM2Q13029 1718 aa32.46■■■□□ 2.79
NEIL1-206ENST00000564784 PELP1Q8IZL8 1130 aaKnown RBP32.43■■■□□ 2.78
NEIL1-206ENST00000564784 RANGAP1P46060 587 aaPredicted RBP32.41■■■□□ 2.78
NEIL1-206ENST00000564784 CENPBP07199 599 aaPredicted RBP32.4■■■□□ 2.78
NEIL1-206ENST00000564784 CLSPNQ9HAW4 1339 aa32.29■■■□□ 2.76
NEIL1-206ENST00000564784 RRBP1Q9P2E9 1410 aaKnown RBP32.26■■■□□ 2.76
NEIL1-206ENST00000564784 ARHGAP35Q9NRY4 1499 aa32.26■■■□□ 2.75
NEIL1-206ENST00000564784 KANK4Q5T7N3 995 aaPredicted RBP32.26■■■□□ 2.75
NEIL1-206ENST00000564784 DHX57Q6P158 1386 aaKnown RBP32.19■■■□□ 2.74
NEIL1-206ENST00000564784 GTF3C3Q9Y5Q9 886 aa32.16■■■□□ 2.74
NEIL1-206ENST00000564784 CUX2O14529 1486 aa32.15■■■□□ 2.74
NEIL1-206ENST00000564784 IGF1RP08069 1367 aa32.15■■■□□ 2.74
NEIL1-206ENST00000564784 CADPSQ9ULU8 1353 aa32.14■■■□□ 2.74
NEIL1-206ENST00000564784 MIER1Q8N108 512 aa32.08■■■□□ 2.73
NEIL1-206ENST00000564784 MAP3K1Q13233 1512 aa32.05■■■□□ 2.72
NEIL1-206ENST00000564784 FGD5Q6ZNL6 1462 aa32.02■■■□□ 2.72
NEIL1-206ENST00000564784 CCNB3Q8WWL7 1395 aa32.02■■■□□ 2.72
NEIL1-206ENST00000564784 CARMIL1Q5VZK9 1371 aa31.98■■■□□ 2.71
NEIL1-206ENST00000564784 TIAM1Q13009 1591 aa31.96■■■□□ 2.71
NEIL1-206ENST00000564784 CC2D2AQ9P2K1 1620 aa31.87■■■□□ 2.69
NEIL1-206ENST00000564784 YTHDC1Q96MU7 727 aaKnown RBP31.83■■■□□ 2.69
NEIL1-206ENST00000564784 FANCD2Q9BXW9 1451 aa31.81■■■□□ 2.68
NEIL1-206ENST00000564784 LRRC9Q6ZRR7 1453 aa31.81■■■□□ 2.68
NEIL1-206ENST00000564784 CFAP43Q8NDM7 1665 aa31.78■■■□□ 2.68
NEIL1-206ENST00000564784 DNMBPQ6XZF7 1577 aa31.77■■■□□ 2.68
NEIL1-206ENST00000564784 FHAD1B1AJZ9 1412 aa31.76■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms