RNA–Protein interactions for RNA: ENST00000572515.5

NFKBIB-204, Transcript of NFKB inhibitor beta, humanhuman

TSL 1 (best) BASIC

Gene NFKBIB, Length 1,929 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIB-204ENST00000572515 NISCHQ9Y2I1 1504 aa52.56■■■■■ 6
NFKBIB-204ENST00000572515 CCDC180Q9P1Z9 1646 aa45.8■■■■■ 4.92
NFKBIB-204ENST00000572515 ZCCHC6Q5VYS8 1495 aaKnown RBP44.18■■■■■ 4.66
NFKBIB-204ENST00000572515 DCAF1Q9Y4B6 1507 aa43.49■■■■■ 4.55
NFKBIB-204ENST00000572515 DCAF8L2P0C7V8 631 aa43.26■■■■■ 4.52
NFKBIB-204ENST00000572515 ABCC9O60706 1549 aa43.19■■■■■ 4.51
NFKBIB-204ENST00000572515 MYO15BQ96JP2 1530 aa42.96■■■■■ 4.47
NFKBIB-204ENST00000572515 SHROOM4Q9ULL8 1493 aa42.84■■■■■ 4.45
NFKBIB-204ENST00000572515 NACADO15069 1562 aa42.63■■■■■ 4.42
NFKBIB-204ENST00000572515 RB1CC1Q8TDY2 1594 aa42.22■■■■■ 4.35
NFKBIB-204ENST00000572515 SCRIBQ14160 1630 aa42.09■■■■■ 4.33
NFKBIB-204ENST00000572515 UNC13AQ9UPW8 1703 aa41.45■■■■■ 4.23
NFKBIB-204ENST00000572515 SUPT5HO00267 1087 aaKnown RBP41.24■■■■■ 4.19
NFKBIB-204ENST00000572515 BICRAQ9NZM4 1560 aa41.02■■■■■ 4.16
NFKBIB-204ENST00000572515 CECR2Q9BXF3 1484 aa40.83■■■■■ 4.13
NFKBIB-204ENST00000572515 RSF1Q96T23 1441 aaPredicted RBP40.8■■■■■ 4.12
NFKBIB-204ENST00000572515 PABPN1Q86U42 306 aaKnown RBP eCLIP40.75■■■■■ 4.11
NFKBIB-204ENST00000572515 MROH2BQ7Z745 1585 aa40.6■■■■■ 4.09
NFKBIB-204ENST00000572515 BAZ1AQ9NRL2 1556 aaPredicted RBP40.56■■■■■ 4.08
NFKBIB-204ENST00000572515 SMARCA4P51532 1647 aa40.38■■■■■ 4.06
NFKBIB-204ENST00000572515 WIZO95785 1651 aa40.27■■■■■ 4.04
NFKBIB-204ENST00000572515 PEG3Q9GZU2 1588 aa39.93■■■■□ 3.98
NFKBIB-204ENST00000572515 TOP2AP11388 1531 aaKnown RBP39.85■■■■□ 3.97
NFKBIB-204ENST00000572515 EIF4G1Q04637 1599 aaKnown RBP39.74■■■■□ 3.95
NFKBIB-204ENST00000572515 ATAD2BQ9ULI0 1458 aa39.7■■■■□ 3.95
NFKBIB-204ENST00000572515 CHIC1Q5VXU3 224 aa39.69■■■■□ 3.94
NFKBIB-204ENST00000572515 SMARCA2P51531 1590 aa39.67■■■■□ 3.94
NFKBIB-204ENST00000572515 CCDC88BA6NC98 1476 aa39.45■■■■□ 3.91
NFKBIB-204ENST00000572515 BAZ1BQ9UIG0 1483 aaKnown RBP39.45■■■■□ 3.91
NFKBIB-204ENST00000572515 NCAPD3P42695 1498 aa39.37■■■■□ 3.89
NFKBIB-204ENST00000572515 HMGXB3Q12766 1538 aa39.31■■■■□ 3.88
NFKBIB-204ENST00000572515 CC2D2AQ9P2K1 1620 aa39.13■■■■□ 3.85
NFKBIB-204ENST00000572515 TRIM41Q8WV44 630 aa38.78■■■■□ 3.8
NFKBIB-204ENST00000572515 ABCC8Q09428 1581 aa38.63■■■■□ 3.77
NFKBIB-204ENST00000572515 CFTRP13569 1480 aa38.51■■■■□ 3.76
NFKBIB-204ENST00000572515 WRNQ14191 1432 aaPredicted RBP eCLIP38.37■■■■□ 3.73
NFKBIB-204ENST00000572515 CADPSQ9ULU8 1353 aa38.34■■■■□ 3.73
NFKBIB-204ENST00000572515 PRDM2Q13029 1718 aa38.32■■■■□ 3.72
NFKBIB-204ENST00000572515 SYNJ1O43426 1573 aa38.23■■■■□ 3.71
NFKBIB-204ENST00000572515 DNAJC5BQ9UF47 199 aa38.15■■■■□ 3.7
NFKBIB-204ENST00000572515 LOC105371045A0A1W2PR82 267 aa38.14■■■■□ 3.7
NFKBIB-204ENST00000572515 TOP2BQ02880 1626 aa38.08■■■■□ 3.69
NFKBIB-204ENST00000572515 FAM9AQ8IZU1 332 aaPredicted RBP38.05■■■■□ 3.68
NFKBIB-204ENST00000572515 BIVM-ERCC5R4GMW8 1640 aa38.05■■■■□ 3.68
NFKBIB-204ENST00000572515 LAMC3Q9Y6N6 1575 aa37.99■■■■□ 3.67
NFKBIB-204ENST00000572515 NESP48681 1621 aa37.98■■■■□ 3.67
NFKBIB-204ENST00000572515 CUX1P39880 1505 aa37.97■■■■□ 3.67
NFKBIB-204ENST00000572515 SOGA1O94964 1423 aa37.92■■■■□ 3.66
NFKBIB-204ENST00000572515 FANCD2Q9BXW9 1451 aa37.9■■■■□ 3.66
NFKBIB-204ENST00000572515 EEA1Q15075 1411 aa37.86■■■■□ 3.65
NFKBIB-204ENST00000572515 RUSC2Q8N2Y8 1516 aa37.79■■■■□ 3.64
NFKBIB-204ENST00000572515 PDS5BQ9NTI5 1447 aa37.67■■■■□ 3.62
NFKBIB-204ENST00000572515 CEP164Q9UPV0 1460 aa37.64■■■■□ 3.62
NFKBIB-204ENST00000572515 CSRNP3Q8WYN3 585 aa37.64■■■■□ 3.62
NFKBIB-204ENST00000572515 DNMBPQ6XZF7 1577 aa37.59■■■■□ 3.61
NFKBIB-204ENST00000572515 KIF21AQ7Z4S6 1674 aa37.53■■■■□ 3.6
NFKBIB-204ENST00000572515 FGD5Q6ZNL6 1462 aa37.52■■■■□ 3.6
NFKBIB-204ENST00000572515 TOPBP1Q92547 1522 aa37.52■■■■□ 3.6
NFKBIB-204ENST00000572515 EHMT2Q96KQ7 1210 aa37.48■■■■□ 3.59
NFKBIB-204ENST00000572515 URB2Q14146 1524 aaKnown RBP37.45■■■■□ 3.59
NFKBIB-204ENST00000572515 KIF27Q86VH2 1401 aa37.39■■■■□ 3.58
NFKBIB-204ENST00000572515 KIF21BO75037 1637 aa37.39■■■■□ 3.58
NFKBIB-204ENST00000572515 POLA1P09884 1462 aaPredicted RBP37.34■■■■□ 3.57
NFKBIB-204ENST00000572515 GOLGA3Q08378 1498 aa37.32■■■■□ 3.57
NFKBIB-204ENST00000572515 CUX2O14529 1486 aa37.27■■■■□ 3.56
NFKBIB-204ENST00000572515 TNIKQ9UKE5 1360 aa37.24■■■■□ 3.55
NFKBIB-204ENST00000572515 ABCA10Q8WWZ4 1543 aa37.21■■■■□ 3.55
NFKBIB-204ENST00000572515 RAD54L2Q9Y4B4 1467 aa37.21■■■■□ 3.55
NFKBIB-204ENST00000572515 PRXQ9BXM0 1461 aa37.2■■■■□ 3.55
NFKBIB-204ENST00000572515 MRC2Q9UBG0 1479 aa37.19■■■■□ 3.54
NFKBIB-204ENST00000572515 RAPGEF2Q9Y4G8 1499 aa37.16■■■■□ 3.54
NFKBIB-204ENST00000572515 ERICH3Q5RHP9 1530 aa37.12■■■■□ 3.53
NFKBIB-204ENST00000572515 UBTFP17480 764 aaKnown RBP37.11■■■■□ 3.53
NFKBIB-204ENST00000572515 WDR97A6NE52 1622 aa37.1■■■■□ 3.53
NFKBIB-204ENST00000572515 IGF1RP08069 1367 aa37.08■■■■□ 3.53
NFKBIB-204ENST00000572515 PCGF6Q9BYE7 350 aa37.06■■■■□ 3.52
NFKBIB-204ENST00000572515 CEP162Q5TB80 1403 aa37.04■■■■□ 3.52
NFKBIB-204ENST00000572515 WDR62O43379 1518 aa37.02■■■■□ 3.52
NFKBIB-204ENST00000572515 ERCC6Q03468 1493 aa37■■■■□ 3.51
NFKBIB-204ENST00000572515 TRIM26Q12899 539 aaPredicted RBP36.98■■■■□ 3.51
NFKBIB-204ENST00000572515 TARBP1Q13395 1621 aaKnown RBP36.98■■■■□ 3.51
NFKBIB-204ENST00000572515 ABCA5Q8WWZ7 1642 aa36.91■■■■□ 3.5
NFKBIB-204ENST00000572515 THOC2Q8NI27 1593 aaKnown RBP36.9■■■■□ 3.5
NFKBIB-204ENST00000572515 CARMIL1Q5VZK9 1371 aa36.87■■■■□ 3.49
NFKBIB-204ENST00000572515 TDRD9Q8NDG6 1382 aaKnown RBP36.83■■■■□ 3.49
NFKBIB-204ENST00000572515 GAPVD1Q14C86 1478 aa36.8■■■■□ 3.48
NFKBIB-204ENST00000572515 CUL7Q14999 1698 aa36.78■■■■□ 3.48
NFKBIB-204ENST00000572515 IFT140Q96RY7 1462 aa36.76■■■■□ 3.47
NFKBIB-204ENST00000572515 CLIP1P30622 1438 aa36.73■■■■□ 3.47
NFKBIB-204ENST00000572515 PBRM1Q86U86 1689 aa36.6■■■■□ 3.45
NFKBIB-204ENST00000572515 AQRO60306 1485 aaKnown RBP eCLIP36.59■■■■□ 3.45
NFKBIB-204ENST00000572515 ZNF608Q9ULD9 1512 aaPredicted RBP36.56■■■■□ 3.44
NFKBIB-204ENST00000572515 HRCP23327 699 aa36.56■■■■□ 3.44
NFKBIB-204ENST00000572515 GRIN2BQ13224 1484 aa36.5■■■■□ 3.43
NFKBIB-204ENST00000572515 RANGAP1P46060 587 aaPredicted RBP36.45■■■■□ 3.43
NFKBIB-204ENST00000572515 EIF4G3O43432 1585 aaKnown RBP36.44■■■■□ 3.42
NFKBIB-204ENST00000572515 VPS8Q8N3P4 1428 aa36.43■■■■□ 3.42
NFKBIB-204ENST00000572515 ADAMTS12P58397 1594 aa36.41■■■■□ 3.42
NFKBIB-204ENST00000572515 FHAD1B1AJZ9 1412 aa36.4■■■■□ 3.42
NFKBIB-204ENST00000572515 ARAP1Q96P48 1450 aa36.4■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms