RNA–Protein interactions for RNA: ENST00000216121.11

NIPSNAP1-201, Transcript of nipsnap homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP1, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-201ENST00000216121 NISCHQ9Y2I1 1504 aa46.5■■■■■ 5.03
NIPSNAP1-201ENST00000216121 CCDC180Q9P1Z9 1646 aa39.75■■■■□ 3.95
NIPSNAP1-201ENST00000216121 ZCCHC6Q5VYS8 1495 aaKnown RBP39.31■■■■□ 3.88
NIPSNAP1-201ENST00000216121 SHROOM4Q9ULL8 1493 aa39.15■■■■□ 3.86
NIPSNAP1-201ENST00000216121 SUPT5HO00267 1087 aaKnown RBP38.34■■■■□ 3.73
NIPSNAP1-201ENST00000216121 DCAF1Q9Y4B6 1507 aa38.32■■■■□ 3.72
NIPSNAP1-201ENST00000216121 DCAF8L2P0C7V8 631 aa38.23■■■■□ 3.71
NIPSNAP1-201ENST00000216121 CHIC1Q5VXU3 224 aa37.34■■■■□ 3.57
NIPSNAP1-201ENST00000216121 MYO15BQ96JP2 1530 aa37.32■■■■□ 3.57
NIPSNAP1-201ENST00000216121 ABCC9O60706 1549 aa37.04■■■■□ 3.52
NIPSNAP1-201ENST00000216121 SCRIBQ14160 1630 aa36.97■■■■□ 3.51
NIPSNAP1-201ENST00000216121 NACADO15069 1562 aa36.76■■■■□ 3.48
NIPSNAP1-201ENST00000216121 RSF1Q96T23 1441 aaPredicted RBP36.67■■■■□ 3.46
NIPSNAP1-201ENST00000216121 RB1CC1Q8TDY2 1594 aa36.3■■■■□ 3.4
NIPSNAP1-201ENST00000216121 CECR2Q9BXF3 1484 aa36.15■■■■□ 3.38
NIPSNAP1-201ENST00000216121 LOC105371045A0A1W2PR82 267 aa36.09■■■■□ 3.37
NIPSNAP1-201ENST00000216121 MROH2BQ7Z745 1585 aa36.06■■■■□ 3.36
NIPSNAP1-201ENST00000216121 HRCP23327 699 aa35.86■■■■□ 3.33
NIPSNAP1-201ENST00000216121 TRIM41Q8WV44 630 aa35.85■■■■□ 3.33
NIPSNAP1-201ENST00000216121 PCGF6Q9BYE7 350 aa35.85■■■■□ 3.33
NIPSNAP1-201ENST00000216121 WIZO95785 1651 aa35.85■■■■□ 3.33
NIPSNAP1-201ENST00000216121 BAZ1AQ9NRL2 1556 aaPredicted RBP35.75■■■■□ 3.31
NIPSNAP1-201ENST00000216121 UNC13AQ9UPW8 1703 aa35.58■■■■□ 3.29
NIPSNAP1-201ENST00000216121 SMARCA4P51532 1647 aa35.45■■■■□ 3.27
NIPSNAP1-201ENST00000216121 EIF4G1Q04637 1599 aaKnown RBP35.39■■■■□ 3.26
NIPSNAP1-201ENST00000216121 TOP2AP11388 1531 aaKnown RBP35.39■■■■□ 3.26
NIPSNAP1-201ENST00000216121 TRIM26Q12899 539 aaPredicted RBP35.38■■■■□ 3.26
NIPSNAP1-201ENST00000216121 FAM9AQ8IZU1 332 aaPredicted RBP35.37■■■■□ 3.25
NIPSNAP1-201ENST00000216121 CCDC88BA6NC98 1476 aa35.16■■■■□ 3.22
NIPSNAP1-201ENST00000216121 SMARCA2P51531 1590 aa35.15■■■■□ 3.22
NIPSNAP1-201ENST00000216121 BICRAQ9NZM4 1560 aa35.14■■■■□ 3.22
NIPSNAP1-201ENST00000216121 PABPN1Q86U42 306 aaKnown RBP eCLIP34.96■■■■□ 3.19
NIPSNAP1-201ENST00000216121 PPARGC1BQ86YN6 1023 aaKnown RBP34.94■■■■□ 3.18
NIPSNAP1-201ENST00000216121 EHMT2Q96KQ7 1210 aa34.91■■■■□ 3.18
NIPSNAP1-201ENST00000216121 ABCC8Q09428 1581 aa34.91■■■■□ 3.18
NIPSNAP1-201ENST00000216121 PEG3Q9GZU2 1588 aa34.89■■■■□ 3.18
NIPSNAP1-201ENST00000216121 ZEB1P37275 1124 aaPredicted RBP34.61■■■■□ 3.13
NIPSNAP1-201ENST00000216121 ATAD2BQ9ULI0 1458 aa34.56■■■■□ 3.12
NIPSNAP1-201ENST00000216121 EEA1Q15075 1411 aa34.56■■■■□ 3.12
NIPSNAP1-201ENST00000216121 SOGA1O94964 1423 aa34.55■■■■□ 3.12
NIPSNAP1-201ENST00000216121 WRNQ14191 1432 aaPredicted RBP eCLIP34.44■■■■□ 3.1
NIPSNAP1-201ENST00000216121 BAZ1BQ9UIG0 1483 aaKnown RBP34.43■■■■□ 3.1
NIPSNAP1-201ENST00000216121 CSRNP3Q8WYN3 585 aa34.4■■■■□ 3.1
NIPSNAP1-201ENST00000216121 TNIKQ9UKE5 1360 aa34.4■■■■□ 3.1
NIPSNAP1-201ENST00000216121 RUSC2Q8N2Y8 1516 aa34.38■■■■□ 3.09
NIPSNAP1-201ENST00000216121 CEP162Q5TB80 1403 aa34.35■■■■□ 3.09
NIPSNAP1-201ENST00000216121 SYNJ1O43426 1573 aa34.27■■■■□ 3.08
NIPSNAP1-201ENST00000216121 GOLGA3Q08378 1498 aa34.22■■■■□ 3.07
NIPSNAP1-201ENST00000216121 UBTFP17480 764 aaKnown RBP34.14■■■■□ 3.06
NIPSNAP1-201ENST00000216121 KIF21BO75037 1637 aa34.07■■■■□ 3.04
NIPSNAP1-201ENST00000216121 CEP164Q9UPV0 1460 aa34.06■■■■□ 3.04
NIPSNAP1-201ENST00000216121 HMGXB3Q12766 1538 aa33.99■■■■□ 3.03
NIPSNAP1-201ENST00000216121 NCAPD3P42695 1498 aa33.99■■■■□ 3.03
NIPSNAP1-201ENST00000216121 TOP2BQ02880 1626 aa33.95■■■■□ 3.03
NIPSNAP1-201ENST00000216121 BIVM-ERCC5R4GMW8 1640 aa33.86■■■■□ 3.01
NIPSNAP1-201ENST00000216121 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.85■■■■□ 3.01
NIPSNAP1-201ENST00000216121 CCER1Q8TC90 406 aaPredicted RBP33.8■■■■□ 3
NIPSNAP1-201ENST00000216121 TTBK1Q5TCY1 1321 aaPredicted RBP33.77■■■■□ 3
NIPSNAP1-201ENST00000216121 CLIP1P30622 1438 aa33.77■■■■□ 3
NIPSNAP1-201ENST00000216121 RAPGEF2Q9Y4G8 1499 aa33.75■■■□□ 2.99
NIPSNAP1-201ENST00000216121 VPS8Q8N3P4 1428 aa33.64■■■□□ 2.98
NIPSNAP1-201ENST00000216121 CFTRP13569 1480 aa33.63■■■□□ 2.97
NIPSNAP1-201ENST00000216121 CUX1P39880 1505 aa33.6■■■□□ 2.97
NIPSNAP1-201ENST00000216121 ERICH3Q5RHP9 1530 aa33.58■■■□□ 2.97
NIPSNAP1-201ENST00000216121 PRXQ9BXM0 1461 aa33.55■■■□□ 2.96
NIPSNAP1-201ENST00000216121 PRDM2Q13029 1718 aa33.44■■■□□ 2.94
NIPSNAP1-201ENST00000216121 KIF27Q86VH2 1401 aa33.42■■■□□ 2.94
NIPSNAP1-201ENST00000216121 APLP2Q06481 763 aa33.38■■■□□ 2.93
NIPSNAP1-201ENST00000216121 RANGAP1P46060 587 aaPredicted RBP33.3■■■□□ 2.92
NIPSNAP1-201ENST00000216121 ARAP1Q96P48 1450 aa33.27■■■□□ 2.92
NIPSNAP1-201ENST00000216121 CADPSQ9ULU8 1353 aa33.26■■■□□ 2.92
NIPSNAP1-201ENST00000216121 HNRNPUL2Q1KMD3 747 aaKnown RBP33.2■■■□□ 2.91
NIPSNAP1-201ENST00000216121 CC2D2AQ9P2K1 1620 aa33.13■■■□□ 2.89
NIPSNAP1-201ENST00000216121 CUX2O14529 1486 aa33.08■■■□□ 2.89
NIPSNAP1-201ENST00000216121 IGF1RP08069 1367 aa33.06■■■□□ 2.88
NIPSNAP1-201ENST00000216121 DIEXFQ68CQ4 756 aaKnown RBP33.06■■■□□ 2.88
NIPSNAP1-201ENST00000216121 ARHGAP35Q9NRY4 1499 aa33.02■■■□□ 2.88
NIPSNAP1-201ENST00000216121 FGD5Q6ZNL6 1462 aa33.01■■■□□ 2.88
NIPSNAP1-201ENST00000216121 KANK4Q5T7N3 995 aaPredicted RBP32.96■■■□□ 2.87
NIPSNAP1-201ENST00000216121 ZNF316A6NFI3 1004 aaPredicted RBP32.93■■■□□ 2.86
NIPSNAP1-201ENST00000216121 FANCD2Q9BXW9 1451 aa32.91■■■□□ 2.86
NIPSNAP1-201ENST00000216121 CARMIL1Q5VZK9 1371 aa32.9■■■□□ 2.86
NIPSNAP1-201ENST00000216121 RRBP1Q9P2E9 1410 aaKnown RBP32.87■■■□□ 2.85
NIPSNAP1-201ENST00000216121 SCAF1Q9H7N4 1312 aaKnown RBP32.8■■■□□ 2.84
NIPSNAP1-201ENST00000216121 DNMBPQ6XZF7 1577 aa32.79■■■□□ 2.84
NIPSNAP1-201ENST00000216121 CLSPNQ9HAW4 1339 aa32.77■■■□□ 2.84
NIPSNAP1-201ENST00000216121 MAP3K1Q13233 1512 aa32.74■■■□□ 2.83
NIPSNAP1-201ENST00000216121 ABCA10Q8WWZ4 1543 aa32.7■■■□□ 2.83
NIPSNAP1-201ENST00000216121 TOPBP1Q92547 1522 aa32.7■■■□□ 2.82
NIPSNAP1-201ENST00000216121 DHX57Q6P158 1386 aaKnown RBP32.69■■■□□ 2.82
NIPSNAP1-201ENST00000216121 CCNB3Q8WWL7 1395 aa32.68■■■□□ 2.82
NIPSNAP1-201ENST00000216121 ACIN1Q9UKV3 1341 aaKnown RBP32.67■■■□□ 2.82
NIPSNAP1-201ENST00000216121 TIAM1Q13009 1591 aa32.66■■■□□ 2.82
NIPSNAP1-201ENST00000216121 POLA1P09884 1462 aaPredicted RBP32.66■■■□□ 2.82
NIPSNAP1-201ENST00000216121 RAD54L2Q9Y4B4 1467 aa32.64■■■□□ 2.82
NIPSNAP1-201ENST00000216121 NESP48681 1621 aa32.64■■■□□ 2.82
NIPSNAP1-201ENST00000216121 FHAD1B1AJZ9 1412 aa32.57■■■□□ 2.8
NIPSNAP1-201ENST00000216121 NEUROD1Q13562 356 aa32.57■■■□□ 2.8
NIPSNAP1-201ENST00000216121 LAMC3Q9Y6N6 1575 aa32.56■■■□□ 2.8
NIPSNAP1-201ENST00000216121 CENPBP07199 599 aaPredicted RBP32.54■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms