RNA–Protein interactions for RNA: ENST00000302101.5

NHLH1-201, Transcript of nescient helix-loop-helix 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLH1, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH1-201ENST00000302101 NISCHQ9Y2I1 1504 aa49.26■■■■■ 5.48
NHLH1-201ENST00000302101 CCDC180Q9P1Z9 1646 aa42.82■■■■■ 4.45
NHLH1-201ENST00000302101 ZCCHC6Q5VYS8 1495 aaKnown RBP41.39■■■■■ 4.22
NHLH1-201ENST00000302101 DCAF8L2P0C7V8 631 aa40.87■■■■■ 4.13
NHLH1-201ENST00000302101 DCAF1Q9Y4B6 1507 aa40.64■■■■■ 4.1
NHLH1-201ENST00000302101 ABCC9O60706 1549 aa40.53■■■■■ 4.08
NHLH1-201ENST00000302101 SHROOM4Q9ULL8 1493 aa40.48■■■■■ 4.07
NHLH1-201ENST00000302101 MYO15BQ96JP2 1530 aa40.08■■■■■ 4.01
NHLH1-201ENST00000302101 NACADO15069 1562 aa39.87■■■■□ 3.97
NHLH1-201ENST00000302101 SCRIBQ14160 1630 aa39.54■■■■□ 3.92
NHLH1-201ENST00000302101 RB1CC1Q8TDY2 1594 aa39.52■■■■□ 3.92
NHLH1-201ENST00000302101 SUPT5HO00267 1087 aaKnown RBP39.03■■■■□ 3.84
NHLH1-201ENST00000302101 UNC13AQ9UPW8 1703 aa38.82■■■■□ 3.8
NHLH1-201ENST00000302101 BICRAQ9NZM4 1560 aa38.36■■■■□ 3.73
NHLH1-201ENST00000302101 CECR2Q9BXF3 1484 aa38.34■■■■□ 3.73
NHLH1-201ENST00000302101 PABPN1Q86U42 306 aaKnown RBP eCLIP38.31■■■■□ 3.72
NHLH1-201ENST00000302101 RSF1Q96T23 1441 aaPredicted RBP38.31■■■■□ 3.72
NHLH1-201ENST00000302101 MROH2BQ7Z745 1585 aa38.12■■■■□ 3.69
NHLH1-201ENST00000302101 BAZ1AQ9NRL2 1556 aaPredicted RBP38.01■■■■□ 3.68
NHLH1-201ENST00000302101 SMARCA4P51532 1647 aa37.85■■■■□ 3.65
NHLH1-201ENST00000302101 WIZO95785 1651 aa37.84■■■■□ 3.65
NHLH1-201ENST00000302101 TOP2AP11388 1531 aaKnown RBP37.36■■■■□ 3.57
NHLH1-201ENST00000302101 CHIC1Q5VXU3 224 aa37.35■■■■□ 3.57
NHLH1-201ENST00000302101 PEG3Q9GZU2 1588 aa37.32■■■■□ 3.56
NHLH1-201ENST00000302101 EIF4G1Q04637 1599 aaKnown RBP37.2■■■■□ 3.55
NHLH1-201ENST00000302101 ATAD2BQ9ULI0 1458 aa37.19■■■■□ 3.54
NHLH1-201ENST00000302101 SMARCA2P51531 1590 aa37.14■■■■□ 3.54
NHLH1-201ENST00000302101 CCDC88BA6NC98 1476 aa37.04■■■■□ 3.52
NHLH1-201ENST00000302101 BAZ1BQ9UIG0 1483 aaKnown RBP37.01■■■■□ 3.52
NHLH1-201ENST00000302101 NCAPD3P42695 1498 aa36.81■■■■□ 3.48
NHLH1-201ENST00000302101 HMGXB3Q12766 1538 aa36.75■■■■□ 3.47
NHLH1-201ENST00000302101 CC2D2AQ9P2K1 1620 aa36.64■■■■□ 3.46
NHLH1-201ENST00000302101 TRIM41Q8WV44 630 aa36.63■■■■□ 3.45
NHLH1-201ENST00000302101 ABCC8Q09428 1581 aa36.37■■■■□ 3.41
NHLH1-201ENST00000302101 CFTRP13569 1480 aa36.06■■■■□ 3.36
NHLH1-201ENST00000302101 WRNQ14191 1432 aaPredicted RBP eCLIP36.06■■■■□ 3.36
NHLH1-201ENST00000302101 FAM9AQ8IZU1 332 aaPredicted RBP36.05■■■■□ 3.36
NHLH1-201ENST00000302101 LOC105371045A0A1W2PR82 267 aa36.02■■■■□ 3.36
NHLH1-201ENST00000302101 CADPSQ9ULU8 1353 aa35.92■■■■□ 3.34
NHLH1-201ENST00000302101 SYNJ1O43426 1573 aa35.91■■■■□ 3.34
NHLH1-201ENST00000302101 PRDM2Q13029 1718 aa35.88■■■■□ 3.33
NHLH1-201ENST00000302101 DNAJC5BQ9UF47 199 aa35.79■■■■□ 3.32
NHLH1-201ENST00000302101 TOP2BQ02880 1626 aa35.72■■■■□ 3.31
NHLH1-201ENST00000302101 SOGA1O94964 1423 aa35.71■■■■□ 3.31
NHLH1-201ENST00000302101 BIVM-ERCC5R4GMW8 1640 aa35.66■■■■□ 3.3
NHLH1-201ENST00000302101 NESP48681 1621 aa35.64■■■■□ 3.3
NHLH1-201ENST00000302101 EHMT2Q96KQ7 1210 aa35.62■■■■□ 3.29
NHLH1-201ENST00000302101 CUX1P39880 1505 aa35.61■■■■□ 3.29
NHLH1-201ENST00000302101 HRCP23327 699 aa35.6■■■■□ 3.29
NHLH1-201ENST00000302101 RUSC2Q8N2Y8 1516 aa35.59■■■■□ 3.29
NHLH1-201ENST00000302101 LAMC3Q9Y6N6 1575 aa35.54■■■■□ 3.28
NHLH1-201ENST00000302101 FANCD2Q9BXW9 1451 aa35.54■■■■□ 3.28
NHLH1-201ENST00000302101 EEA1Q15075 1411 aa35.54■■■■□ 3.28
NHLH1-201ENST00000302101 PCGF6Q9BYE7 350 aa35.51■■■■□ 3.28
NHLH1-201ENST00000302101 CSRNP3Q8WYN3 585 aa35.44■■■■□ 3.26
NHLH1-201ENST00000302101 CEP164Q9UPV0 1460 aa35.28■■■■□ 3.24
NHLH1-201ENST00000302101 PDS5BQ9NTI5 1447 aa35.28■■■■□ 3.24
NHLH1-201ENST00000302101 FGD5Q6ZNL6 1462 aa35.21■■■■□ 3.23
NHLH1-201ENST00000302101 DNMBPQ6XZF7 1577 aa35.21■■■■□ 3.23
NHLH1-201ENST00000302101 KIF21AQ7Z4S6 1674 aa35.18■■■■□ 3.22
NHLH1-201ENST00000302101 TOPBP1Q92547 1522 aa35.16■■■■□ 3.22
NHLH1-201ENST00000302101 KIF27Q86VH2 1401 aa35.11■■■■□ 3.21
NHLH1-201ENST00000302101 GOLGA3Q08378 1498 aa35.11■■■■□ 3.21
NHLH1-201ENST00000302101 KIF21BO75037 1637 aa35.1■■■■□ 3.21
NHLH1-201ENST00000302101 URB2Q14146 1524 aaKnown RBP35.09■■■■□ 3.21
NHLH1-201ENST00000302101 UBTFP17480 764 aaKnown RBP35.07■■■■□ 3.2
NHLH1-201ENST00000302101 TNIKQ9UKE5 1360 aa35.03■■■■□ 3.2
NHLH1-201ENST00000302101 CUX2O14529 1486 aa35.02■■■■□ 3.2
NHLH1-201ENST00000302101 POLA1P09884 1462 aaPredicted RBP35.02■■■■□ 3.2
NHLH1-201ENST00000302101 RAPGEF2Q9Y4G8 1499 aa34.96■■■■□ 3.19
NHLH1-201ENST00000302101 RAD54L2Q9Y4B4 1467 aa34.95■■■■□ 3.19
NHLH1-201ENST00000302101 PRXQ9BXM0 1461 aa34.9■■■■□ 3.18
NHLH1-201ENST00000302101 CEP162Q5TB80 1403 aa34.89■■■■□ 3.18
NHLH1-201ENST00000302101 PPARGC1BQ86YN6 1023 aaKnown RBP34.87■■■■□ 3.17
NHLH1-201ENST00000302101 ABCA10Q8WWZ4 1543 aa34.86■■■■□ 3.17
NHLH1-201ENST00000302101 ERICH3Q5RHP9 1530 aa34.83■■■■□ 3.17
NHLH1-201ENST00000302101 MRC2Q9UBG0 1479 aa34.81■■■■□ 3.16
NHLH1-201ENST00000302101 IGF1RP08069 1367 aa34.81■■■■□ 3.16
NHLH1-201ENST00000302101 TRIM26Q12899 539 aaPredicted RBP34.76■■■■□ 3.15
NHLH1-201ENST00000302101 WDR97A6NE52 1622 aa34.73■■■■□ 3.15
NHLH1-201ENST00000302101 ERCC6Q03468 1493 aa34.71■■■■□ 3.15
NHLH1-201ENST00000302101 CARMIL1Q5VZK9 1371 aa34.65■■■■□ 3.14
NHLH1-201ENST00000302101 TARBP1Q13395 1621 aaKnown RBP34.62■■■■□ 3.13
NHLH1-201ENST00000302101 TDRD9Q8NDG6 1382 aaKnown RBP34.62■■■■□ 3.13
NHLH1-201ENST00000302101 WDR62O43379 1518 aa34.61■■■■□ 3.13
NHLH1-201ENST00000302101 CLIP1P30622 1438 aa34.59■■■■□ 3.13
NHLH1-201ENST00000302101 ABCA5Q8WWZ7 1642 aa34.56■■■■□ 3.12
NHLH1-201ENST00000302101 RANGAP1P46060 587 aaPredicted RBP34.56■■■■□ 3.12
NHLH1-201ENST00000302101 GAPVD1Q14C86 1478 aa34.53■■■■□ 3.12
NHLH1-201ENST00000302101 THOC2Q8NI27 1593 aaKnown RBP34.5■■■■□ 3.11
NHLH1-201ENST00000302101 CUL7Q14999 1698 aa34.48■■■■□ 3.11
NHLH1-201ENST00000302101 IFT140Q96RY7 1462 aa34.4■■■■□ 3.1
NHLH1-201ENST00000302101 AQRO60306 1485 aaKnown RBP eCLIP34.36■■■■□ 3.09
NHLH1-201ENST00000302101 PBRM1Q86U86 1689 aa34.32■■■■□ 3.08
NHLH1-201ENST00000302101 ZNF608Q9ULD9 1512 aaPredicted RBP34.3■■■■□ 3.08
NHLH1-201ENST00000302101 VPS8Q8N3P4 1428 aa34.28■■■■□ 3.08
NHLH1-201ENST00000302101 ARAP1Q96P48 1450 aa34.21■■■■□ 3.07
NHLH1-201ENST00000302101 GRIN2BQ13224 1484 aa34.2■■■■□ 3.07
NHLH1-201ENST00000302101 ARHGAP35Q9NRY4 1499 aa34.19■■■■□ 3.06
NHLH1-201ENST00000302101 CTTNBP2Q8WZ74 1663 aa34.16■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms