RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 NISCHQ9Y2I1 1504 aa49.88■■■■■ 5.58
CTSF-201ENST00000310325 CCDC180Q9P1Z9 1646 aa43.07■■■■■ 4.49
CTSF-201ENST00000310325 ZCCHC6Q5VYS8 1495 aaKnown RBP42.08■■■■■ 4.33
CTSF-201ENST00000310325 SHROOM4Q9ULL8 1493 aa41.43■■■■■ 4.22
CTSF-201ENST00000310325 DCAF1Q9Y4B6 1507 aa41.17■■■■■ 4.18
CTSF-201ENST00000310325 DCAF8L2P0C7V8 631 aa41.01■■■■■ 4.16
CTSF-201ENST00000310325 MYO15BQ96JP2 1530 aa40.33■■■■■ 4.05
CTSF-201ENST00000310325 SUPT5HO00267 1087 aaKnown RBP40.26■■■■■ 4.04
CTSF-201ENST00000310325 ABCC9O60706 1549 aa40.07■■■■■ 4
CTSF-201ENST00000310325 NACADO15069 1562 aa39.89■■■■□ 3.98
CTSF-201ENST00000310325 SCRIBQ14160 1630 aa39.85■■■■□ 3.97
CTSF-201ENST00000310325 RB1CC1Q8TDY2 1594 aa39.38■■■■□ 3.89
CTSF-201ENST00000310325 RSF1Q96T23 1441 aaPredicted RBP39.04■■■■□ 3.84
CTSF-201ENST00000310325 CHIC1Q5VXU3 224 aa38.94■■■■□ 3.82
CTSF-201ENST00000310325 CECR2Q9BXF3 1484 aa38.75■■■■□ 3.79
CTSF-201ENST00000310325 UNC13AQ9UPW8 1703 aa38.74■■■■□ 3.79
CTSF-201ENST00000310325 MROH2BQ7Z745 1585 aa38.62■■■■□ 3.77
CTSF-201ENST00000310325 BAZ1AQ9NRL2 1556 aaPredicted RBP38.44■■■■□ 3.74
CTSF-201ENST00000310325 WIZO95785 1651 aa38.39■■■■□ 3.74
CTSF-201ENST00000310325 BICRAQ9NZM4 1560 aa38.23■■■■□ 3.71
CTSF-201ENST00000310325 SMARCA4P51532 1647 aa38.2■■■■□ 3.71
CTSF-201ENST00000310325 PABPN1Q86U42 306 aaKnown RBP eCLIP37.96■■■■□ 3.67
CTSF-201ENST00000310325 TOP2AP11388 1531 aaKnown RBP37.93■■■■□ 3.66
CTSF-201ENST00000310325 TRIM41Q8WV44 630 aa37.73■■■■□ 3.63
CTSF-201ENST00000310325 EIF4G1Q04637 1599 aaKnown RBP37.69■■■■□ 3.62
CTSF-201ENST00000310325 SMARCA2P51531 1590 aa37.64■■■■□ 3.62
CTSF-201ENST00000310325 PEG3Q9GZU2 1588 aa37.64■■■■□ 3.62
CTSF-201ENST00000310325 CCDC88BA6NC98 1476 aa37.59■■■■□ 3.61
CTSF-201ENST00000310325 LOC105371045A0A1W2PR82 267 aa37.53■■■■□ 3.6
CTSF-201ENST00000310325 ATAD2BQ9ULI0 1458 aa37.33■■■■□ 3.57
CTSF-201ENST00000310325 BAZ1BQ9UIG0 1483 aaKnown RBP37.18■■■■□ 3.54
CTSF-201ENST00000310325 FAM9AQ8IZU1 332 aaPredicted RBP37.15■■■■□ 3.54
CTSF-201ENST00000310325 ABCC8Q09428 1581 aa37.15■■■■□ 3.54
CTSF-201ENST00000310325 HMGXB3Q12766 1538 aa36.86■■■■□ 3.49
CTSF-201ENST00000310325 NCAPD3P42695 1498 aa36.81■■■■□ 3.48
CTSF-201ENST00000310325 PCGF6Q9BYE7 350 aa36.73■■■■□ 3.47
CTSF-201ENST00000310325 WRNQ14191 1432 aaPredicted RBP eCLIP36.73■■■■□ 3.47
CTSF-201ENST00000310325 EHMT2Q96KQ7 1210 aa36.66■■■■□ 3.46
CTSF-201ENST00000310325 EEA1Q15075 1411 aa36.6■■■■□ 3.45
CTSF-201ENST00000310325 SYNJ1O43426 1573 aa36.59■■■■□ 3.45
CTSF-201ENST00000310325 SOGA1O94964 1423 aa36.59■■■■□ 3.45
CTSF-201ENST00000310325 TRIM26Q12899 539 aaPredicted RBP36.44■■■■□ 3.42
CTSF-201ENST00000310325 RUSC2Q8N2Y8 1516 aa36.42■■■■□ 3.42
CTSF-201ENST00000310325 CSRNP3Q8WYN3 585 aa36.35■■■■□ 3.41
CTSF-201ENST00000310325 HRCP23327 699 aa36.34■■■■□ 3.41
CTSF-201ENST00000310325 TOP2BQ02880 1626 aa36.34■■■■□ 3.41
CTSF-201ENST00000310325 BIVM-ERCC5R4GMW8 1640 aa36.29■■■■□ 3.4
CTSF-201ENST00000310325 CFTRP13569 1480 aa36.26■■■■□ 3.4
CTSF-201ENST00000310325 CC2D2AQ9P2K1 1620 aa36.26■■■■□ 3.39
CTSF-201ENST00000310325 TNIKQ9UKE5 1360 aa36.22■■■■□ 3.39
CTSF-201ENST00000310325 PRDM2Q13029 1718 aa36.2■■■■□ 3.39
CTSF-201ENST00000310325 GOLGA3Q08378 1498 aa36.19■■■■□ 3.38
CTSF-201ENST00000310325 CEP162Q5TB80 1403 aa36.14■■■■□ 3.38
CTSF-201ENST00000310325 KIF21BO75037 1637 aa36.13■■■■□ 3.37
CTSF-201ENST00000310325 CEP164Q9UPV0 1460 aa36.1■■■■□ 3.37
CTSF-201ENST00000310325 CUX1P39880 1505 aa36.05■■■■□ 3.36
CTSF-201ENST00000310325 UBTFP17480 764 aaKnown RBP36.01■■■■□ 3.35
CTSF-201ENST00000310325 CADPSQ9ULU8 1353 aa35.95■■■■□ 3.35
CTSF-201ENST00000310325 RAPGEF2Q9Y4G8 1499 aa35.8■■■■□ 3.32
CTSF-201ENST00000310325 PPARGC1BQ86YN6 1023 aaKnown RBP35.75■■■■□ 3.31
CTSF-201ENST00000310325 ERICH3Q5RHP9 1530 aa35.71■■■■□ 3.31
CTSF-201ENST00000310325 KIF27Q86VH2 1401 aa35.69■■■■□ 3.3
CTSF-201ENST00000310325 PRXQ9BXM0 1461 aa35.68■■■■□ 3.3
CTSF-201ENST00000310325 CLIP1P30622 1438 aa35.65■■■■□ 3.3
CTSF-201ENST00000310325 FANCD2Q9BXW9 1451 aa35.6■■■■□ 3.29
CTSF-201ENST00000310325 FGD5Q6ZNL6 1462 aa35.52■■■■□ 3.28
CTSF-201ENST00000310325 NESP48681 1621 aa35.46■■■■□ 3.27
CTSF-201ENST00000310325 LAMC3Q9Y6N6 1575 aa35.45■■■■□ 3.27
CTSF-201ENST00000310325 VPS8Q8N3P4 1428 aa35.45■■■■□ 3.27
CTSF-201ENST00000310325 CUX2O14529 1486 aa35.45■■■■□ 3.27
CTSF-201ENST00000310325 DNMBPQ6XZF7 1577 aa35.43■■■■□ 3.26
CTSF-201ENST00000310325 ZEB1P37275 1124 aaPredicted RBP35.39■■■■□ 3.26
CTSF-201ENST00000310325 TTBK1Q5TCY1 1321 aaPredicted RBP35.32■■■■□ 3.25
CTSF-201ENST00000310325 TOPBP1Q92547 1522 aa35.32■■■■□ 3.24
CTSF-201ENST00000310325 IGF1RP08069 1367 aa35.29■■■■□ 3.24
CTSF-201ENST00000310325 RANGAP1P46060 587 aaPredicted RBP35.25■■■■□ 3.23
CTSF-201ENST00000310325 POLA1P09884 1462 aaPredicted RBP35.22■■■■□ 3.23
CTSF-201ENST00000310325 ARAP1Q96P48 1450 aa35.21■■■■□ 3.23
CTSF-201ENST00000310325 ABCA10Q8WWZ4 1543 aa35.19■■■■□ 3.22
CTSF-201ENST00000310325 RAD54L2Q9Y4B4 1467 aa35.14■■■■□ 3.22
CTSF-201ENST00000310325 CARMIL1Q5VZK9 1371 aa35.14■■■■□ 3.22
CTSF-201ENST00000310325 PDS5BQ9NTI5 1447 aa35.13■■■■□ 3.21
CTSF-201ENST00000310325 URB2Q14146 1524 aaKnown RBP35.13■■■■□ 3.21
CTSF-201ENST00000310325 DNAJC5BQ9UF47 199 aa35.13■■■■□ 3.21
CTSF-201ENST00000310325 APLP2Q06481 763 aa35.11■■■■□ 3.21
CTSF-201ENST00000310325 KIF21AQ7Z4S6 1674 aa35.05■■■■□ 3.2
CTSF-201ENST00000310325 WDR97A6NE52 1622 aa35.05■■■■□ 3.2
CTSF-201ENST00000310325 ARHGAP35Q9NRY4 1499 aa35.04■■■■□ 3.2
CTSF-201ENST00000310325 CUL7Q14999 1698 aa34.97■■■■□ 3.19
CTSF-201ENST00000310325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.96■■■■□ 3.19
CTSF-201ENST00000310325 CCER1Q8TC90 406 aaPredicted RBP34.89■■■■□ 3.18
CTSF-201ENST00000310325 ABCA5Q8WWZ7 1642 aa34.86■■■■□ 3.17
CTSF-201ENST00000310325 CTTNBP2Q8WZ74 1663 aa34.76■■■■□ 3.15
CTSF-201ENST00000310325 TARBP1Q13395 1621 aaKnown RBP34.73■■■■□ 3.15
CTSF-201ENST00000310325 GAPVD1Q14C86 1478 aa34.73■■■■□ 3.15
CTSF-201ENST00000310325 TDRD9Q8NDG6 1382 aaKnown RBP34.71■■■■□ 3.15
CTSF-201ENST00000310325 KANK4Q5T7N3 995 aaPredicted RBP34.69■■■■□ 3.14
CTSF-201ENST00000310325 MRC2Q9UBG0 1479 aa34.66■■■■□ 3.14
CTSF-201ENST00000310325 EFCAB5A4FU69 1503 aa34.64■■■■□ 3.14
CTSF-201ENST00000310325 HNRNPUL2Q1KMD3 747 aaKnown RBP34.64■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms