RNA–Protein interactions for RNA: ENST00000358580.9

APBB3-204, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 5 BASIC

Gene APBB3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-204ENST00000358580 NISCHQ9Y2I1 1504 aa47.11■■■■■ 5.13
APBB3-204ENST00000358580 CCDC180Q9P1Z9 1646 aa40.45■■■■■ 4.07
APBB3-204ENST00000358580 ZCCHC6Q5VYS8 1495 aaKnown RBP39.82■■■■□ 3.96
APBB3-204ENST00000358580 SHROOM4Q9ULL8 1493 aa39.31■■■■□ 3.88
APBB3-204ENST00000358580 DCAF1Q9Y4B6 1507 aa38.96■■■■□ 3.83
APBB3-204ENST00000358580 DCAF8L2P0C7V8 631 aa38.54■■■■□ 3.76
APBB3-204ENST00000358580 SUPT5HO00267 1087 aaKnown RBP38.46■■■■□ 3.75
APBB3-204ENST00000358580 MYO15BQ96JP2 1530 aa38.03■■■■□ 3.68
APBB3-204ENST00000358580 ABCC9O60706 1549 aa37.49■■■■□ 3.59
APBB3-204ENST00000358580 CHIC1Q5VXU3 224 aa37.48■■■■□ 3.59
APBB3-204ENST00000358580 NACADO15069 1562 aa37.42■■■■□ 3.58
APBB3-204ENST00000358580 SCRIBQ14160 1630 aa37.4■■■■□ 3.58
APBB3-204ENST00000358580 RSF1Q96T23 1441 aaPredicted RBP37.05■■■■□ 3.52
APBB3-204ENST00000358580 RB1CC1Q8TDY2 1594 aa36.8■■■■□ 3.48
APBB3-204ENST00000358580 CECR2Q9BXF3 1484 aa36.52■■■■□ 3.44
APBB3-204ENST00000358580 MROH2BQ7Z745 1585 aa36.45■■■■□ 3.43
APBB3-204ENST00000358580 BAZ1AQ9NRL2 1556 aaPredicted RBP36.27■■■■□ 3.4
APBB3-204ENST00000358580 WIZO95785 1651 aa36.2■■■■□ 3.39
APBB3-204ENST00000358580 LOC105371045A0A1W2PR82 267 aa36.1■■■■□ 3.37
APBB3-204ENST00000358580 TRIM41Q8WV44 630 aa36.08■■■■□ 3.37
APBB3-204ENST00000358580 UNC13AQ9UPW8 1703 aa36.07■■■■□ 3.36
APBB3-204ENST00000358580 SMARCA4P51532 1647 aa35.93■■■■□ 3.34
APBB3-204ENST00000358580 TOP2AP11388 1531 aaKnown RBP35.86■■■■□ 3.33
APBB3-204ENST00000358580 EIF4G1Q04637 1599 aaKnown RBP35.77■■■■□ 3.32
APBB3-204ENST00000358580 HRCP23327 699 aa35.77■■■■□ 3.32
APBB3-204ENST00000358580 PCGF6Q9BYE7 350 aa35.76■■■■□ 3.32
APBB3-204ENST00000358580 BICRAQ9NZM4 1560 aa35.68■■■■□ 3.3
APBB3-204ENST00000358580 SMARCA2P51531 1590 aa35.56■■■■□ 3.28
APBB3-204ENST00000358580 CCDC88BA6NC98 1476 aa35.55■■■■□ 3.28
APBB3-204ENST00000358580 TRIM26Q12899 539 aaPredicted RBP35.47■■■■□ 3.27
APBB3-204ENST00000358580 PEG3Q9GZU2 1588 aa35.46■■■■□ 3.27
APBB3-204ENST00000358580 FAM9AQ8IZU1 332 aaPredicted RBP35.44■■■■□ 3.26
APBB3-204ENST00000358580 PABPN1Q86U42 306 aaKnown RBP eCLIP35.36■■■■□ 3.25
APBB3-204ENST00000358580 ABCC8Q09428 1581 aa35.16■■■■□ 3.22
APBB3-204ENST00000358580 ATAD2BQ9ULI0 1458 aa35.06■■■■□ 3.2
APBB3-204ENST00000358580 EEA1Q15075 1411 aa35■■■■□ 3.19
APBB3-204ENST00000358580 BAZ1BQ9UIG0 1483 aaKnown RBP34.92■■■■□ 3.18
APBB3-204ENST00000358580 EHMT2Q96KQ7 1210 aa34.88■■■■□ 3.17
APBB3-204ENST00000358580 WRNQ14191 1432 aaPredicted RBP eCLIP34.82■■■■□ 3.16
APBB3-204ENST00000358580 SOGA1O94964 1423 aa34.8■■■■□ 3.16
APBB3-204ENST00000358580 ZEB1P37275 1124 aaPredicted RBP34.73■■■■□ 3.15
APBB3-204ENST00000358580 TNIKQ9UKE5 1360 aa34.71■■■■□ 3.15
APBB3-204ENST00000358580 CSRNP3Q8WYN3 585 aa34.7■■■■□ 3.15
APBB3-204ENST00000358580 PPARGC1BQ86YN6 1023 aaKnown RBP34.69■■■■□ 3.14
APBB3-204ENST00000358580 SYNJ1O43426 1573 aa34.6■■■■□ 3.13
APBB3-204ENST00000358580 HMGXB3Q12766 1538 aa34.59■■■■□ 3.13
APBB3-204ENST00000358580 CEP162Q5TB80 1403 aa34.59■■■■□ 3.13
APBB3-204ENST00000358580 RUSC2Q8N2Y8 1516 aa34.58■■■■□ 3.13
APBB3-204ENST00000358580 NCAPD3P42695 1498 aa34.56■■■■□ 3.12
APBB3-204ENST00000358580 GOLGA3Q08378 1498 aa34.55■■■■□ 3.12
APBB3-204ENST00000358580 KIF21BO75037 1637 aa34.44■■■■□ 3.1
APBB3-204ENST00000358580 CEP164Q9UPV0 1460 aa34.42■■■■□ 3.1
APBB3-204ENST00000358580 TOP2BQ02880 1626 aa34.38■■■■□ 3.09
APBB3-204ENST00000358580 UBTFP17480 764 aaKnown RBP34.35■■■■□ 3.09
APBB3-204ENST00000358580 BIVM-ERCC5R4GMW8 1640 aa34.3■■■■□ 3.08
APBB3-204ENST00000358580 CFTRP13569 1480 aa34.14■■■■□ 3.06
APBB3-204ENST00000358580 CLIP1P30622 1438 aa34.04■■■■□ 3.04
APBB3-204ENST00000358580 RAPGEF2Q9Y4G8 1499 aa34.03■■■■□ 3.04
APBB3-204ENST00000358580 ERICH3Q5RHP9 1530 aa34■■■■□ 3.03
APBB3-204ENST00000358580 CUX1P39880 1505 aa33.99■■■■□ 3.03
APBB3-204ENST00000358580 PRDM2Q13029 1718 aa33.95■■■■□ 3.03
APBB3-204ENST00000358580 VPS8Q8N3P4 1428 aa33.93■■■■□ 3.02
APBB3-204ENST00000358580 PRXQ9BXM0 1461 aa33.93■■■■□ 3.02
APBB3-204ENST00000358580 CCER1Q8TC90 406 aaPredicted RBP33.85■■■■□ 3.01
APBB3-204ENST00000358580 KIF27Q86VH2 1401 aa33.84■■■■□ 3.01
APBB3-204ENST00000358580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.82■■■■□ 3
APBB3-204ENST00000358580 CADPSQ9ULU8 1353 aa33.77■■■■□ 3
APBB3-204ENST00000358580 TTBK1Q5TCY1 1321 aaPredicted RBP33.73■■■□□ 2.99
APBB3-204ENST00000358580 CC2D2AQ9P2K1 1620 aa33.68■■■□□ 2.98
APBB3-204ENST00000358580 APLP2Q06481 763 aa33.65■■■□□ 2.98
APBB3-204ENST00000358580 ARAP1Q96P48 1450 aa33.54■■■□□ 2.96
APBB3-204ENST00000358580 CUX2O14529 1486 aa33.46■■■□□ 2.95
APBB3-204ENST00000358580 FGD5Q6ZNL6 1462 aa33.43■■■□□ 2.94
APBB3-204ENST00000358580 IGF1RP08069 1367 aa33.42■■■□□ 2.94
APBB3-204ENST00000358580 RANGAP1P46060 587 aaPredicted RBP33.39■■■□□ 2.94
APBB3-204ENST00000358580 FANCD2Q9BXW9 1451 aa33.38■■■□□ 2.93
APBB3-204ENST00000358580 ARHGAP35Q9NRY4 1499 aa33.32■■■□□ 2.92
APBB3-204ENST00000358580 DNMBPQ6XZF7 1577 aa33.3■■■□□ 2.92
APBB3-204ENST00000358580 CARMIL1Q5VZK9 1371 aa33.27■■■□□ 2.92
APBB3-204ENST00000358580 HNRNPUL2Q1KMD3 747 aaKnown RBP33.26■■■□□ 2.92
APBB3-204ENST00000358580 ABCA10Q8WWZ4 1543 aa33.18■■■□□ 2.9
APBB3-204ENST00000358580 TOPBP1Q92547 1522 aa33.16■■■□□ 2.9
APBB3-204ENST00000358580 LAMC3Q9Y6N6 1575 aa33.15■■■□□ 2.9
APBB3-204ENST00000358580 MAP3K1Q13233 1512 aa33.14■■■□□ 2.9
APBB3-204ENST00000358580 RRBP1Q9P2E9 1410 aaKnown RBP33.14■■■□□ 2.9
APBB3-204ENST00000358580 KANK4Q5T7N3 995 aaPredicted RBP33.12■■■□□ 2.89
APBB3-204ENST00000358580 POLA1P09884 1462 aaPredicted RBP33.1■■■□□ 2.89
APBB3-204ENST00000358580 NESP48681 1621 aa33.04■■■□□ 2.88
APBB3-204ENST00000358580 CLSPNQ9HAW4 1339 aa33.04■■■□□ 2.88
APBB3-204ENST00000358580 DIEXFQ68CQ4 756 aaKnown RBP33.02■■■□□ 2.88
APBB3-204ENST00000358580 CUL7Q14999 1698 aa33.01■■■□□ 2.88
APBB3-204ENST00000358580 RAD54L2Q9Y4B4 1467 aa33■■■□□ 2.87
APBB3-204ENST00000358580 ZNF316A6NFI3 1004 aaPredicted RBP32.97■■■□□ 2.87
APBB3-204ENST00000358580 FHAD1B1AJZ9 1412 aa32.97■■■□□ 2.87
APBB3-204ENST00000358580 TIAM1Q13009 1591 aa32.97■■■□□ 2.87
APBB3-204ENST00000358580 CCNB3Q8WWL7 1395 aa32.93■■■□□ 2.86
APBB3-204ENST00000358580 WDR97A6NE52 1622 aa32.9■■■□□ 2.86
APBB3-204ENST00000358580 EFCAB5A4FU69 1503 aa32.9■■■□□ 2.86
APBB3-204ENST00000358580 URB2Q14146 1524 aaKnown RBP32.9■■■□□ 2.86
APBB3-204ENST00000358580 PDS5BQ9NTI5 1447 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms