Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ERCC1P07992 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ERCC1P07992 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ERCC1P07992 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
ERCC1P07992 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ERCC1P07992 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ERCC1P07992 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ERCC1P07992 ABHD17AP5-201ENST00000580133 923 ntBASIC21.42■■□□□ 1.02
ERCC1P07992 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.42■■□□□ 1.02
ERCC1P07992 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.42■■□□□ 1.02
ERCC1P07992 AP004609.3-201ENST00000610705 1884 ntBASIC21.42■■□□□ 1.02
ERCC1P07992 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC1P07992 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC1P07992 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.41■■□□□ 1.02
ERCC1P07992 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC1P07992 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
ERCC1P07992 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC1P07992 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ERCC1P07992 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.41■■□□□ 1.02
ERCC1P07992 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
ERCC1P07992 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.41■■□□□ 1.02
ERCC1P07992 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.4■■□□□ 1.02
ERCC1P07992 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ERCC1P07992 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ERCC1P07992 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ERCC1P07992 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ERCC1P07992 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ERCC1P07992 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ERCC1P07992 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ERCC1P07992 AC092803.2-201ENST00000564287 1899 ntBASIC21.38■■□□□ 1.01
ERCC1P07992 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.38■■□□□ 1.01
ERCC1P07992 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ERCC1P07992 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ERCC1P07992 DUSP8P4-201ENST00000399538 1761 ntBASIC21.36■■□□□ 1.01
ERCC1P07992 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.36■■□□□ 1.01
ERCC1P07992 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
ERCC1P07992 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
ERCC1P07992 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.36■■□□□ 1.01
ERCC1P07992 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ERCC1P07992 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC1P07992 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC1P07992 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC1P07992 AC060814.1-201ENST00000554326 538 ntBASIC21.35■■□□□ 1.01
ERCC1P07992 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC1P07992 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC1P07992 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC1P07992 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC1P07992 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.34■■□□□ 1.01
ERCC1P07992 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC1P07992 AC142472.1-201ENST00000612013 1741 ntBASIC21.33■■□□□ 1.01
ERCC1P07992 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.33■■□□□ 1.01
ERCC1P07992 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1.01
ERCC1P07992 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.33■■□□□ 1.01
ERCC1P07992 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ERCC1P07992 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ERCC1P07992 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ERCC1P07992 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
ERCC1P07992 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ERCC1P07992 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ERCC1P07992 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.32■■□□□ 1
ERCC1P07992 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ERCC1P07992 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.31■■□□□ 1
ERCC1P07992 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ERCC1P07992 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ERCC1P07992 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.31■■□□□ 1
ERCC1P07992 WHAMMP3-201ENST00000611636 1609 ntBASIC21.31■■□□□ 1
ERCC1P07992 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ERCC1P07992 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ERCC1P07992 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.31■■□□□ 1
ERCC1P07992 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ERCC1P07992 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ERCC1P07992 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ERCC1P07992 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ERCC1P07992 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ERCC1P07992 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ERCC1P07992 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.29■■□□□ 1
ERCC1P07992 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ERCC1P07992 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
ERCC1P07992 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.29■■□□□ 1
ERCC1P07992 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ERCC1P07992 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.29■■□□□ 1
ERCC1P07992 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ERCC1P07992 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
ERCC1P07992 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.28■■□□□ 1
ERCC1P07992 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.28■■□□□ 1
ERCC1P07992 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.28■■□□□ 1
ERCC1P07992 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
ERCC1P07992 ECEL1P2-201ENST00000461596 1295 ntBASIC21.27■■□□□ 1
ERCC1P07992 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.27■■□□□ 1
ERCC1P07992 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.27■■□□□ 1
ERCC1P07992 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ERCC1P07992 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
ERCC1P07992 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC1P07992 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ERCC1P07992 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.26■□□□□ 0.99
ERCC1P07992 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ERCC1P07992 AC020928.2-201ENST00000588717 2197 ntBASIC21.26■□□□□ 0.99
ERCC1P07992 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.26■□□□□ 0.99
ERCC1P07992 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC1P07992 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms