RNA–Protein interactions for RNA: ENST00000539137.5

SRP68-202, Transcript of signal recognition particle 68, humanhuman

TSL 2 BASIC

Gene SRP68, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP68-202ENST00000539137 NISCHQ9Y2I1 1504 aa54.16■■■■■ 6.26
SRP68-202ENST00000539137 CCDC180Q9P1Z9 1646 aa46.99■■■■■ 5.11
SRP68-202ENST00000539137 ZCCHC6Q5VYS8 1495 aaKnown RBP45.55■■■■■ 4.88
SRP68-202ENST00000539137 DCAF1Q9Y4B6 1507 aa44.77■■■■■ 4.76
SRP68-202ENST00000539137 DCAF8L2P0C7V8 631 aa44.76■■■■■ 4.76
SRP68-202ENST00000539137 SHROOM4Q9ULL8 1493 aa44.47■■■■■ 4.71
SRP68-202ENST00000539137 ABCC9O60706 1549 aa44.24■■■■■ 4.67
SRP68-202ENST00000539137 MYO15BQ96JP2 1530 aa44.12■■■■■ 4.65
SRP68-202ENST00000539137 NACADO15069 1562 aa43.75■■■■■ 4.59
SRP68-202ENST00000539137 SCRIBQ14160 1630 aa43.31■■■■■ 4.52
SRP68-202ENST00000539137 RB1CC1Q8TDY2 1594 aa43.3■■■■■ 4.52
SRP68-202ENST00000539137 SUPT5HO00267 1087 aaKnown RBP43■■■■■ 4.47
SRP68-202ENST00000539137 UNC13AQ9UPW8 1703 aa42.34■■■■■ 4.37
SRP68-202ENST00000539137 RSF1Q96T23 1441 aaPredicted RBP42.17■■■■■ 4.34
SRP68-202ENST00000539137 CECR2Q9BXF3 1484 aa42.07■■■■■ 4.32
SRP68-202ENST00000539137 BICRAQ9NZM4 1560 aa41.96■■■■■ 4.31
SRP68-202ENST00000539137 MROH2BQ7Z745 1585 aa41.85■■■■■ 4.29
SRP68-202ENST00000539137 PABPN1Q86U42 306 aaKnown RBP eCLIP41.85■■■■■ 4.29
SRP68-202ENST00000539137 BAZ1AQ9NRL2 1556 aaPredicted RBP41.79■■■■■ 4.28
SRP68-202ENST00000539137 SMARCA4P51532 1647 aa41.53■■■■■ 4.24
SRP68-202ENST00000539137 WIZO95785 1651 aa41.5■■■■■ 4.23
SRP68-202ENST00000539137 CHIC1Q5VXU3 224 aa41.3■■■■■ 4.2
SRP68-202ENST00000539137 TOP2AP11388 1531 aaKnown RBP41.09■■■■■ 4.17
SRP68-202ENST00000539137 PEG3Q9GZU2 1588 aa41.01■■■■■ 4.16
SRP68-202ENST00000539137 ATAD2BQ9ULI0 1458 aa40.81■■■■■ 4.12
SRP68-202ENST00000539137 SMARCA2P51531 1590 aa40.79■■■■■ 4.12
SRP68-202ENST00000539137 CCDC88BA6NC98 1476 aa40.72■■■■■ 4.11
SRP68-202ENST00000539137 EIF4G1Q04637 1599 aaKnown RBP40.7■■■■■ 4.11
SRP68-202ENST00000539137 BAZ1BQ9UIG0 1483 aaKnown RBP40.61■■■■■ 4.09
SRP68-202ENST00000539137 NCAPD3P42695 1498 aa40.41■■■■■ 4.06
SRP68-202ENST00000539137 TRIM41Q8WV44 630 aa40.41■■■■■ 4.06
SRP68-202ENST00000539137 HMGXB3Q12766 1538 aa40.35■■■■■ 4.05
SRP68-202ENST00000539137 CC2D2AQ9P2K1 1620 aa40.01■■■■■ 4
SRP68-202ENST00000539137 ABCC8Q09428 1581 aa39.94■■■■□ 3.98
SRP68-202ENST00000539137 LOC105371045A0A1W2PR82 267 aa39.75■■■■□ 3.95
SRP68-202ENST00000539137 WRNQ14191 1432 aaPredicted RBP eCLIP39.7■■■■□ 3.95
SRP68-202ENST00000539137 FAM9AQ8IZU1 332 aaPredicted RBP39.67■■■■□ 3.94
SRP68-202ENST00000539137 CFTRP13569 1480 aa39.61■■■■□ 3.93
SRP68-202ENST00000539137 SYNJ1O43426 1573 aa39.45■■■■□ 3.91
SRP68-202ENST00000539137 CADPSQ9ULU8 1353 aa39.43■■■■□ 3.9
SRP68-202ENST00000539137 SOGA1O94964 1423 aa39.31■■■■□ 3.88
SRP68-202ENST00000539137 EEA1Q15075 1411 aa39.31■■■■□ 3.88
SRP68-202ENST00000539137 PRDM2Q13029 1718 aa39.29■■■■□ 3.88
SRP68-202ENST00000539137 TOP2BQ02880 1626 aa39.28■■■■□ 3.88
SRP68-202ENST00000539137 BIVM-ERCC5R4GMW8 1640 aa39.2■■■■□ 3.87
SRP68-202ENST00000539137 RUSC2Q8N2Y8 1516 aa39.11■■■■□ 3.85
SRP68-202ENST00000539137 CUX1P39880 1505 aa39.11■■■■□ 3.85
SRP68-202ENST00000539137 EHMT2Q96KQ7 1210 aa39.1■■■■□ 3.85
SRP68-202ENST00000539137 CSRNP3Q8WYN3 585 aa39.1■■■■□ 3.85
SRP68-202ENST00000539137 FANCD2Q9BXW9 1451 aa38.98■■■■□ 3.83
SRP68-202ENST00000539137 LAMC3Q9Y6N6 1575 aa38.95■■■■□ 3.83
SRP68-202ENST00000539137 DNAJC5BQ9UF47 199 aa38.95■■■■□ 3.83
SRP68-202ENST00000539137 NESP48681 1621 aa38.93■■■■□ 3.82
SRP68-202ENST00000539137 GOLGA3Q08378 1498 aa38.77■■■■□ 3.8
SRP68-202ENST00000539137 CEP164Q9UPV0 1460 aa38.74■■■■□ 3.79
SRP68-202ENST00000539137 TNIKQ9UKE5 1360 aa38.73■■■■□ 3.79
SRP68-202ENST00000539137 KIF21BO75037 1637 aa38.71■■■■□ 3.79
SRP68-202ENST00000539137 PDS5BQ9NTI5 1447 aa38.71■■■■□ 3.79
SRP68-202ENST00000539137 KIF27Q86VH2 1401 aa38.68■■■■□ 3.78
SRP68-202ENST00000539137 UBTFP17480 764 aaKnown RBP38.66■■■■□ 3.78
SRP68-202ENST00000539137 DNMBPQ6XZF7 1577 aa38.64■■■■□ 3.78
SRP68-202ENST00000539137 FGD5Q6ZNL6 1462 aa38.64■■■■□ 3.78
SRP68-202ENST00000539137 TOPBP1Q92547 1522 aa38.57■■■■□ 3.77
SRP68-202ENST00000539137 CEP162Q5TB80 1403 aa38.53■■■■□ 3.76
SRP68-202ENST00000539137 CUX2O14529 1486 aa38.48■■■■□ 3.75
SRP68-202ENST00000539137 RAPGEF2Q9Y4G8 1499 aa38.48■■■■□ 3.75
SRP68-202ENST00000539137 PRXQ9BXM0 1461 aa38.47■■■■□ 3.75
SRP68-202ENST00000539137 URB2Q14146 1524 aaKnown RBP38.44■■■■□ 3.74
SRP68-202ENST00000539137 POLA1P09884 1462 aaPredicted RBP38.42■■■■□ 3.74
SRP68-202ENST00000539137 ERICH3Q5RHP9 1530 aa38.42■■■■□ 3.74
SRP68-202ENST00000539137 KIF21AQ7Z4S6 1674 aa38.39■■■■□ 3.74
SRP68-202ENST00000539137 ABCA10Q8WWZ4 1543 aa38.32■■■■□ 3.72
SRP68-202ENST00000539137 RAD54L2Q9Y4B4 1467 aa38.3■■■■□ 3.72
SRP68-202ENST00000539137 IGF1RP08069 1367 aa38.3■■■■□ 3.72
SRP68-202ENST00000539137 PCGF6Q9BYE7 350 aa38.3■■■■□ 3.72
SRP68-202ENST00000539137 TRIM26Q12899 539 aaPredicted RBP38.22■■■■□ 3.71
SRP68-202ENST00000539137 CLIP1P30622 1438 aa38.17■■■■□ 3.7
SRP68-202ENST00000539137 MRC2Q9UBG0 1479 aa38.15■■■■□ 3.7
SRP68-202ENST00000539137 CARMIL1Q5VZK9 1371 aa38.12■■■■□ 3.69
SRP68-202ENST00000539137 WDR97A6NE52 1622 aa38.07■■■■□ 3.68
SRP68-202ENST00000539137 TDRD9Q8NDG6 1382 aaKnown RBP37.94■■■■□ 3.66
SRP68-202ENST00000539137 ERCC6Q03468 1493 aa37.93■■■■□ 3.66
SRP68-202ENST00000539137 TARBP1Q13395 1621 aaKnown RBP37.93■■■■□ 3.66
SRP68-202ENST00000539137 ABCA5Q8WWZ7 1642 aa37.93■■■■□ 3.66
SRP68-202ENST00000539137 RANGAP1P46060 587 aaPredicted RBP37.92■■■■□ 3.66
SRP68-202ENST00000539137 WDR62O43379 1518 aa37.91■■■■□ 3.66
SRP68-202ENST00000539137 GAPVD1Q14C86 1478 aa37.9■■■■□ 3.66
SRP68-202ENST00000539137 CUL7Q14999 1698 aa37.9■■■■□ 3.66
SRP68-202ENST00000539137 VPS8Q8N3P4 1428 aa37.87■■■■□ 3.65
SRP68-202ENST00000539137 PPARGC1BQ86YN6 1023 aaKnown RBP37.86■■■■□ 3.65
SRP68-202ENST00000539137 IFT140Q96RY7 1462 aa37.75■■■■□ 3.63
SRP68-202ENST00000539137 ARAP1Q96P48 1450 aa37.71■■■■□ 3.63
SRP68-202ENST00000539137 THOC2Q8NI27 1593 aaKnown RBP37.68■■■■□ 3.62
SRP68-202ENST00000539137 ARHGAP35Q9NRY4 1499 aa37.66■■■■□ 3.62
SRP68-202ENST00000539137 AQRO60306 1485 aaKnown RBP eCLIP37.63■■■■□ 3.619e-7■■■■■ 31.4
SRP68-202ENST00000539137 APLP2Q06481 763 aa37.6■■■■□ 3.61
SRP68-202ENST00000539137 PBRM1Q86U86 1689 aa37.56■■■■□ 3.6
SRP68-202ENST00000539137 GRIN2BQ13224 1484 aa37.55■■■■□ 3.6
SRP68-202ENST00000539137 ZNF608Q9ULD9 1512 aaPredicted RBP37.52■■■■□ 3.6
SRP68-202ENST00000539137 TTBK1Q5TCY1 1321 aaPredicted RBP37.51■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms