Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.27■■□□□ 1.16
ARHGEF9O43307 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
ARHGEF9O43307 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
ARHGEF9O43307 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ARHGEF9O43307 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
ARHGEF9O43307 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
ARHGEF9O43307 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.26■■□□□ 1.15
ARHGEF9O43307 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.26■■□□□ 1.15
ARHGEF9O43307 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.26■■□□□ 1.15
ARHGEF9O43307 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ARHGEF9O43307 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.26■■□□□ 1.15
ARHGEF9O43307 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ARHGEF9O43307 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.25■■□□□ 1.15
ARHGEF9O43307 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ARHGEF9O43307 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.25■■□□□ 1.15
ARHGEF9O43307 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ARHGEF9O43307 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ARHGEF9O43307 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.25■■□□□ 1.15
ARHGEF9O43307 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.25■■□□□ 1.15
ARHGEF9O43307 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
ARHGEF9O43307 GPX1-201ENST00000419349 1106 ntBASIC22.24■■□□□ 1.15
ARHGEF9O43307 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.24■■□□□ 1.15
ARHGEF9O43307 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
ARHGEF9O43307 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.23■■□□□ 1.15
ARHGEF9O43307 AL449106.1-201ENST00000608517 1980 ntBASIC22.23■■□□□ 1.15
ARHGEF9O43307 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.23■■□□□ 1.15
ARHGEF9O43307 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.23■■□□□ 1.15
ARHGEF9O43307 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.22■■□□□ 1.15
ARHGEF9O43307 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ARHGEF9O43307 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
ARHGEF9O43307 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.22■■□□□ 1.15
ARHGEF9O43307 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
ARHGEF9O43307 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.22■■□□□ 1.15
ARHGEF9O43307 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.21■■□□□ 1.15
ARHGEF9O43307 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ARHGEF9O43307 RNF126P1-201ENST00000567452 1320 ntBASIC22.21■■□□□ 1.15
ARHGEF9O43307 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ARHGEF9O43307 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.21■■□□□ 1.15
ARHGEF9O43307 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.2■■□□□ 1.14
ARHGEF9O43307 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ARHGEF9O43307 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
ARHGEF9O43307 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ARHGEF9O43307 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ARHGEF9O43307 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ARHGEF9O43307 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ARHGEF9O43307 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ARHGEF9O43307 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.19■■□□□ 1.14
ARHGEF9O43307 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ARHGEF9O43307 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
ARHGEF9O43307 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ARHGEF9O43307 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ARHGEF9O43307 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ARHGEF9O43307 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ARHGEF9O43307 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ARHGEF9O43307 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ARHGEF9O43307 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
ARHGEF9O43307 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ARHGEF9O43307 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ARHGEF9O43307 AP004609.3-201ENST00000610705 1884 ntBASIC22.17■■□□□ 1.14
ARHGEF9O43307 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
ARHGEF9O43307 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ARHGEF9O43307 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ARHGEF9O43307 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ARHGEF9O43307 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.16■■□□□ 1.14
ARHGEF9O43307 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ARHGEF9O43307 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
ARHGEF9O43307 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ARHGEF9O43307 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.16■■□□□ 1.14
ARHGEF9O43307 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
ARHGEF9O43307 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ARHGEF9O43307 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.15■■□□□ 1.14
ARHGEF9O43307 WHAMMP3-201ENST00000611636 1609 ntBASIC22.15■■□□□ 1.14
ARHGEF9O43307 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.15■■□□□ 1.14
ARHGEF9O43307 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
ARHGEF9O43307 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
ARHGEF9O43307 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
ARHGEF9O43307 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
ARHGEF9O43307 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
ARHGEF9O43307 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
ARHGEF9O43307 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
ARHGEF9O43307 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ARHGEF9O43307 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ARHGEF9O43307 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.13■■□□□ 1.13
ARHGEF9O43307 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
ARHGEF9O43307 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
ARHGEF9O43307 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
ARHGEF9O43307 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ARHGEF9O43307 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ARHGEF9O43307 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ARHGEF9O43307 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ARHGEF9O43307 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
ARHGEF9O43307 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
ARHGEF9O43307 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ARHGEF9O43307 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.12■■□□□ 1.13
ARHGEF9O43307 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.12■■□□□ 1.13
ARHGEF9O43307 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
ARHGEF9O43307 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ARHGEF9O43307 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ARHGEF9O43307 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ARHGEF9O43307 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms