RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 NISCHQ9Y2I1 1504 aa52.72■■■■■ 6.03
TRIOBP-203ENST00000403663 CCDC180Q9P1Z9 1646 aa46.11■■■■■ 4.97
TRIOBP-203ENST00000403663 ZCCHC6Q5VYS8 1495 aaKnown RBP44.21■■■■■ 4.67
TRIOBP-203ENST00000403663 ABCC9O60706 1549 aa44.1■■■■■ 4.65
TRIOBP-203ENST00000403663 DCAF8L2P0C7V8 631 aa43.75■■■■■ 4.59
TRIOBP-203ENST00000403663 DCAF1Q9Y4B6 1507 aa43.48■■■■■ 4.55
TRIOBP-203ENST00000403663 MYO15BQ96JP2 1530 aa43.09■■■■■ 4.49
TRIOBP-203ENST00000403663 NACADO15069 1562 aa43.01■■■■■ 4.48
TRIOBP-203ENST00000403663 SHROOM4Q9ULL8 1493 aa42.89■■■■■ 4.46
TRIOBP-203ENST00000403663 RB1CC1Q8TDY2 1594 aa42.76■■■■■ 4.44
TRIOBP-203ENST00000403663 SCRIBQ14160 1630 aa42.49■■■■■ 4.39
TRIOBP-203ENST00000403663 UNC13AQ9UPW8 1703 aa42.08■■■■■ 4.33
TRIOBP-203ENST00000403663 BICRAQ9NZM4 1560 aa41.61■■■■■ 4.25
TRIOBP-203ENST00000403663 PABPN1Q86U42 306 aaKnown RBP eCLIP41.53■■■■■ 4.24
TRIOBP-203ENST00000403663 CECR2Q9BXF3 1484 aa41.1■■■■■ 4.17
TRIOBP-203ENST00000403663 SUPT5HO00267 1087 aaKnown RBP41■■■■■ 4.15
TRIOBP-203ENST00000403663 MROH2BQ7Z745 1585 aa40.79■■■■■ 4.12
TRIOBP-203ENST00000403663 RSF1Q96T23 1441 aaPredicted RBP40.77■■■■■ 4.12
TRIOBP-203ENST00000403663 BAZ1AQ9NRL2 1556 aaPredicted RBP40.7■■■■■ 4.11
TRIOBP-203ENST00000403663 SMARCA4P51532 1647 aa40.64■■■■■ 4.1
TRIOBP-203ENST00000403663 WIZO95785 1651 aa40.47■■■■■ 4.07
TRIOBP-203ENST00000403663 EIF4G1Q04637 1599 aaKnown RBP40.34■■■■■ 4.05
TRIOBP-203ENST00000403663 PEG3Q9GZU2 1588 aa40.1■■■■■ 4.01
TRIOBP-203ENST00000403663 ATAD2BQ9ULI0 1458 aa40.05■■■■■ 4
TRIOBP-203ENST00000403663 SMARCA2P51531 1590 aa39.95■■■■□ 3.99
TRIOBP-203ENST00000403663 TOP2AP11388 1531 aaKnown RBP39.93■■■■□ 3.98
TRIOBP-203ENST00000403663 CC2D2AQ9P2K1 1620 aa39.87■■■■□ 3.97
TRIOBP-203ENST00000403663 BAZ1BQ9UIG0 1483 aaKnown RBP39.79■■■■□ 3.96
TRIOBP-203ENST00000403663 NCAPD3P42695 1498 aa39.72■■■■□ 3.95
TRIOBP-203ENST00000403663 HMGXB3Q12766 1538 aa39.63■■■■□ 3.93
TRIOBP-203ENST00000403663 CCDC88BA6NC98 1476 aa39.56■■■■□ 3.92
TRIOBP-203ENST00000403663 DNAJC5BQ9UF47 199 aa39.33■■■■□ 3.89
TRIOBP-203ENST00000403663 CHIC1Q5VXU3 224 aa39■■■■□ 3.83
TRIOBP-203ENST00000403663 HRCP23327 699 aa38.82■■■■□ 3.81
TRIOBP-203ENST00000403663 CFTRP13569 1480 aa38.76■■■■□ 3.79
TRIOBP-203ENST00000403663 ABCC8Q09428 1581 aa38.69■■■■□ 3.78
TRIOBP-203ENST00000403663 CADPSQ9ULU8 1353 aa38.69■■■■□ 3.78
TRIOBP-203ENST00000403663 NESP48681 1621 aa38.63■■■■□ 3.78
TRIOBP-203ENST00000403663 PRDM2Q13029 1718 aa38.57■■■■□ 3.77
TRIOBP-203ENST00000403663 TRIM41Q8WV44 630 aa38.49■■■■□ 3.75
TRIOBP-203ENST00000403663 LAMC3Q9Y6N6 1575 aa38.44■■■■□ 3.74
TRIOBP-203ENST00000403663 WRNQ14191 1432 aaPredicted RBP eCLIP38.36■■■■□ 3.73
TRIOBP-203ENST00000403663 SYNJ1O43426 1573 aa38.31■■■■□ 3.72
TRIOBP-203ENST00000403663 FANCD2Q9BXW9 1451 aa38.3■■■■□ 3.72
TRIOBP-203ENST00000403663 CUX1P39880 1505 aa38.16■■■■□ 3.7
TRIOBP-203ENST00000403663 KIF21AQ7Z4S6 1674 aa38.15■■■■□ 3.7
TRIOBP-203ENST00000403663 PDS5BQ9NTI5 1447 aa38.12■■■■□ 3.69
TRIOBP-203ENST00000403663 TOP2BQ02880 1626 aa38.11■■■■□ 3.69
TRIOBP-203ENST00000403663 PCGF6Q9BYE7 350 aa38.1■■■■□ 3.69
TRIOBP-203ENST00000403663 BIVM-ERCC5R4GMW8 1640 aa38.08■■■■□ 3.69
TRIOBP-203ENST00000403663 CEP164Q9UPV0 1460 aa38.07■■■■□ 3.69
TRIOBP-203ENST00000403663 FAM9AQ8IZU1 332 aaPredicted RBP37.9■■■■□ 3.66
TRIOBP-203ENST00000403663 URB2Q14146 1524 aaKnown RBP37.89■■■■□ 3.66
TRIOBP-203ENST00000403663 PPARGC1BQ86YN6 1023 aaKnown RBP37.89■■■■□ 3.66
TRIOBP-203ENST00000403663 DNMBPQ6XZF7 1577 aa37.86■■■■□ 3.65
TRIOBP-203ENST00000403663 TOPBP1Q92547 1522 aa37.85■■■■□ 3.65
TRIOBP-203ENST00000403663 SOGA1O94964 1423 aa37.84■■■■□ 3.65
TRIOBP-203ENST00000403663 RUSC2Q8N2Y8 1516 aa37.78■■■■□ 3.64
TRIOBP-203ENST00000403663 FGD5Q6ZNL6 1462 aa37.78■■■■□ 3.64
TRIOBP-203ENST00000403663 ERCC6Q03468 1493 aa37.76■■■■□ 3.64
TRIOBP-203ENST00000403663 MRC2Q9UBG0 1479 aa37.7■■■■□ 3.63
TRIOBP-203ENST00000403663 POLA1P09884 1462 aaPredicted RBP37.65■■■■□ 3.62
TRIOBP-203ENST00000403663 LOC105371045A0A1W2PR82 267 aa37.59■■■■□ 3.61
TRIOBP-203ENST00000403663 RAD54L2Q9Y4B4 1467 aa37.58■■■■□ 3.61
TRIOBP-203ENST00000403663 THOC2Q8NI27 1593 aaKnown RBP37.58■■■■□ 3.61
TRIOBP-203ENST00000403663 WDR62O43379 1518 aa37.54■■■■□ 3.6
TRIOBP-203ENST00000403663 EHMT2Q96KQ7 1210 aa37.48■■■■□ 3.59
TRIOBP-203ENST00000403663 EEA1Q15075 1411 aa37.47■■■■□ 3.59
TRIOBP-203ENST00000403663 CUX2O14529 1486 aa37.44■■■■□ 3.58
TRIOBP-203ENST00000403663 CSRNP3Q8WYN3 585 aa37.41■■■■□ 3.58
TRIOBP-203ENST00000403663 KIF27Q86VH2 1401 aa37.38■■■■□ 3.57
TRIOBP-203ENST00000403663 ABCA10Q8WWZ4 1543 aa37.38■■■■□ 3.57
TRIOBP-203ENST00000403663 WDR97A6NE52 1622 aa37.37■■■■□ 3.57
TRIOBP-203ENST00000403663 TARBP1Q13395 1621 aaKnown RBP37.35■■■■□ 3.57
TRIOBP-203ENST00000403663 TDRD9Q8NDG6 1382 aaKnown RBP37.23■■■■□ 3.55
TRIOBP-203ENST00000403663 ABCA5Q8WWZ7 1642 aa37.16■■■■□ 3.54
TRIOBP-203ENST00000403663 IFT140Q96RY7 1462 aa37.15■■■■□ 3.54
TRIOBP-203ENST00000403663 IGF1RP08069 1367 aa37.15■■■■□ 3.54
TRIOBP-203ENST00000403663 KIF21BO75037 1637 aa37.12■■■■□ 3.53
TRIOBP-203ENST00000403663 ZNF608Q9ULD9 1512 aaPredicted RBP37.11■■■■□ 3.53
TRIOBP-203ENST00000403663 TRIM26Q12899 539 aaPredicted RBP37.09■■■■□ 3.53
TRIOBP-203ENST00000403663 AQRO60306 1485 aaKnown RBP eCLIP37.07■■■■□ 3.521e-6■■■■□ 24.7
TRIOBP-203ENST00000403663 GAPVD1Q14C86 1478 aa37.07■■■■□ 3.52
TRIOBP-203ENST00000403663 PRXQ9BXM0 1461 aa37.07■■■■□ 3.52
TRIOBP-203ENST00000403663 RAPGEF2Q9Y4G8 1499 aa37.07■■■■□ 3.52
TRIOBP-203ENST00000403663 GOLGA3Q08378 1498 aa37.03■■■■□ 3.52
TRIOBP-203ENST00000403663 PBRM1Q86U86 1689 aa36.95■■■■□ 3.51
TRIOBP-203ENST00000403663 EIF4G3O43432 1585 aaKnown RBP36.94■■■■□ 3.5
TRIOBP-203ENST00000403663 CARMIL1Q5VZK9 1371 aa36.93■■■■□ 3.5
TRIOBP-203ENST00000403663 UBTFP17480 764 aaKnown RBP36.92■■■■□ 3.5
TRIOBP-203ENST00000403663 PELP1Q8IZL8 1130 aaKnown RBP36.92■■■■□ 3.5
TRIOBP-203ENST00000403663 ERICH3Q5RHP9 1530 aa36.91■■■■□ 3.5
TRIOBP-203ENST00000403663 CUL7Q14999 1698 aa36.85■■■■□ 3.49
TRIOBP-203ENST00000403663 TNIKQ9UKE5 1360 aa36.82■■■■□ 3.48
TRIOBP-203ENST00000403663 GRIN2BQ13224 1484 aa36.81■■■■□ 3.48
TRIOBP-203ENST00000403663 ZEB1P37275 1124 aaPredicted RBP36.7■■■■□ 3.47
TRIOBP-203ENST00000403663 ADAMTS12P58397 1594 aa36.7■■■■□ 3.47
TRIOBP-203ENST00000403663 SNAPC4Q5SXM2 1469 aa36.69■■■■□ 3.46
TRIOBP-203ENST00000403663 CEP162Q5TB80 1403 aa36.67■■■■□ 3.46
TRIOBP-203ENST00000403663 FHAD1B1AJZ9 1412 aa36.62■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms