RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 DCAF8L2P0C7V8 631 aa35.29■■■■□ 3.24
SH3D19-211ENST00000604030 NISCHQ9Y2I1 1504 aa34.42■■■■□ 3.1
SH3D19-211ENST00000604030 SUPT5HO00267 1087 aaKnown RBP34.12■■■■□ 3.05
SH3D19-211ENST00000604030 PELP1Q8IZL8 1130 aaKnown RBP33.68■■■□□ 2.98
SH3D19-211ENST00000604030 SHROOM4Q9ULL8 1493 aa33.25■■■□□ 2.91
SH3D19-211ENST00000604030 APLP2Q06481 763 aa32.84■■■□□ 2.85
SH3D19-211ENST00000604030 ZEB1P37275 1124 aaPredicted RBP32.59■■■□□ 2.81
SH3D19-211ENST00000604030 EHMT2Q96KQ7 1210 aa32.53■■■□□ 2.8
SH3D19-211ENST00000604030 CENPBP07199 599 aaPredicted RBP32.42■■■□□ 2.78
SH3D19-211ENST00000604030 PCGF6Q9BYE7 350 aa32.36■■■□□ 2.77
SH3D19-211ENST00000604030 FAM9AQ8IZU1 332 aaPredicted RBP32.15■■■□□ 2.74
SH3D19-211ENST00000604030 CCER1Q8TC90 406 aaPredicted RBP32.11■■■□□ 2.73
SH3D19-211ENST00000604030 MYT1Q01538 1121 aa32.1■■■□□ 2.73
SH3D19-211ENST00000604030 ERICH6Q7L0X2 663 aa31.93■■■□□ 2.7
SH3D19-211ENST00000604030 TRIM41Q8WV44 630 aa31.85■■■□□ 2.69
SH3D19-211ENST00000604030 TTBK1Q5TCY1 1321 aaPredicted RBP31.63■■■□□ 2.65
SH3D19-211ENST00000604030 NEFLP07196 543 aa31.53■■■□□ 2.64
SH3D19-211ENST00000604030 UBTFP17480 764 aaKnown RBP31.36■■■□□ 2.61
SH3D19-211ENST00000604030 TRIM26Q12899 539 aaPredicted RBP31.32■■■□□ 2.6
SH3D19-211ENST00000604030 HRCP23327 699 aa31.17■■■□□ 2.58
SH3D19-211ENST00000604030 RANGAP1P46060 587 aaPredicted RBP31.16■■■□□ 2.58
SH3D19-211ENST00000604030 ATP1B4Q9UN42 357 aaPredicted RBP31.07■■■□□ 2.56
SH3D19-211ENST00000604030 YTHDC1Q96MU7 727 aaKnown RBP31.02■■■□□ 2.56
SH3D19-211ENST00000604030 CHIC1Q5VXU3 224 aa30.63■■■□□ 2.49
SH3D19-211ENST00000604030 DAXXQ9UER7 740 aaPredicted RBP30.53■■■□□ 2.48
SH3D19-211ENST00000604030 PPARGC1BQ86YN6 1023 aaKnown RBP30.52■■■□□ 2.48
SH3D19-211ENST00000604030 LOC105371045A0A1W2PR82 267 aa30.31■■■□□ 2.44
SH3D19-211ENST00000604030 HNRNPUL2Q1KMD3 747 aaKnown RBP30.2■■■□□ 2.43
SH3D19-211ENST00000604030 DIEXFQ68CQ4 756 aaKnown RBP30.2■■■□□ 2.43
SH3D19-211ENST00000604030 ITGAEP38570 1179 aa30.17■■■□□ 2.42
SH3D19-211ENST00000604030 RTL5Q5HYW3 569 aaPredicted RBP30.03■■■□□ 2.4
SH3D19-211ENST00000604030 POLR3GLQ9BT43 218 aa30■■■□□ 2.39
SH3D19-211ENST00000604030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.96■■■□□ 2.39
SH3D19-211ENST00000604030 ZNF316A6NFI3 1004 aaPredicted RBP29.8■■■□□ 2.36
SH3D19-211ENST00000604030 MYT1LQ9UL68 1186 aa29.77■■■□□ 2.36
SH3D19-211ENST00000604030 CLSPNQ9HAW4 1339 aa29.64■■■□□ 2.33
SH3D19-211ENST00000604030 GTF3C3Q9Y5Q9 886 aa29.62■■■□□ 2.33
SH3D19-211ENST00000604030 ANP32CO43423 234 aa29.59■■■□□ 2.33
SH3D19-211ENST00000604030 FAM50AQ14320 339 aaKnown RBP29.58■■■□□ 2.33
SH3D19-211ENST00000604030 CDK11AQ9UQ88 783 aaPredicted RBP29.54■■■□□ 2.32
SH3D19-211ENST00000604030 CNGB1Q14028 1251 aaPredicted RBP29.46■■■□□ 2.31
SH3D19-211ENST00000604030 TRIM52Q96A61 297 aa29.44■■■□□ 2.3
SH3D19-211ENST00000604030 ACIN1Q9UKV3 1341 aaKnown RBP29.4■■■□□ 2.3
SH3D19-211ENST00000604030 NEUROD1Q13562 356 aa29.35■■■□□ 2.29
SH3D19-211ENST00000604030 SLC4A1APQ9BWU0 796 aaKnown RBP29.34■■■□□ 2.29
SH3D19-211ENST00000604030 BCANQ96GW7 911 aa29.24■■■□□ 2.27
SH3D19-211ENST00000604030 DCAF1Q9Y4B6 1507 aa29.14■■■□□ 2.26
SH3D19-211ENST00000604030 ZBTB47Q9UFB7 747 aaPredicted RBP29.13■■■□□ 2.25
SH3D19-211ENST00000604030 CSRNP3Q8WYN3 585 aa29.11■■■□□ 2.25
SH3D19-211ENST00000604030 ANP32AP39687 249 aaKnown RBP29.08■■■□□ 2.25
SH3D19-211ENST00000604030 ZNF326Q5BKZ1 582 aaKnown RBP28.95■■■□□ 2.23
SH3D19-211ENST00000604030 ABCC9O60706 1549 aa28.92■■■□□ 2.22
SH3D19-211ENST00000604030 CANXP27824 592 aaKnown RBP28.91■■■□□ 2.22
SH3D19-211ENST00000604030 NEFMP07197 916 aa28.85■■■□□ 2.21
SH3D19-211ENST00000604030 PABPN1Q86U42 306 aaKnown RBP eCLIP28.83■■■□□ 2.21
SH3D19-211ENST00000604030 TONSLQ96HA7 1378 aa28.74■■■□□ 2.19
SH3D19-211ENST00000604030 FKBP8Q14318 412 aa28.68■■■□□ 2.18
SH3D19-211ENST00000604030 ANP32BQ92688 251 aaKnown RBP28.61■■■□□ 2.17
SH3D19-211ENST00000604030 ZCCHC6Q5VYS8 1495 aaKnown RBP28.58■■■□□ 2.17
SH3D19-211ENST00000604030 UPF2Q9HAU5 1272 aaKnown RBP28.56■■■□□ 2.16
SH3D19-211ENST00000604030 HNRNPUQ00839 825 aaKnown RBP eCLIP28.54■■■□□ 2.16
SH3D19-211ENST00000604030 NPM2Q86SE8 214 aaKnown RBP28.49■■■□□ 2.15
SH3D19-211ENST00000604030 P3H3Q8IVL6 736 aa28.49■■■□□ 2.15
SH3D19-211ENST00000604030 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.43■■■□□ 2.14
SH3D19-211ENST00000604030 FBLN2P98095 1184 aa28.42■■■□□ 2.14
SH3D19-211ENST00000604030 DDX10Q13206 875 aaKnown RBP28.42■■■□□ 2.14
SH3D19-211ENST00000604030 GLIPR1L2Q4G1C9 344 aa28.39■■■□□ 2.14
SH3D19-211ENST00000604030 CCDC136Q96JN2 1154 aa28.35■■■□□ 2.13
SH3D19-211ENST00000604030 HSP90AA1P07900 732 aaKnown RBP28.35■■■□□ 2.13
SH3D19-211ENST00000604030 ZNF777Q9ULD5 760 aaPredicted RBP28.35■■■□□ 2.13
SH3D19-211ENST00000604030 FAM9BQ8IZU0 186 aa28.31■■■□□ 2.12
SH3D19-211ENST00000604030 SCRIBQ14160 1630 aa28.3■■■□□ 2.12
SH3D19-211ENST00000604030 EEA1Q15075 1411 aa28.29■■■□□ 2.12
SH3D19-211ENST00000604030 TMC1Q8TDI8 760 aa28.28■■■□□ 2.12
SH3D19-211ENST00000604030 EIF5BO60841 1220 aaKnown RBP28.24■■■□□ 2.11
SH3D19-211ENST00000604030 SLC24A1O60721 1099 aa28.24■■■□□ 2.11
SH3D19-211ENST00000604030 SCAF1Q9H7N4 1312 aaKnown RBP28.22■■■□□ 2.11
SH3D19-211ENST00000604030 MRS2Q9HD23 443 aa28.18■■■□□ 2.1
SH3D19-211ENST00000604030 ARID3CA6NKF2 412 aa28.16■■■□□ 2.1
SH3D19-211ENST00000604030 CLIP1P30622 1438 aa28.16■■■□□ 2.1
SH3D19-211ENST00000604030 MIER1Q8N108 512 aa28.14■■■□□ 2.1
SH3D19-211ENST00000604030 BCL11AQ9H165 835 aa28.14■■■□□ 2.09
SH3D19-211ENST00000604030 WDR43Q15061 677 aaKnown RBP eCLIP28.12■■■□□ 2.09
SH3D19-211ENST00000604030 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
SH3D19-211ENST00000604030 DDRGK1Q96HY6 314 aa28.09■■■□□ 2.09
SH3D19-211ENST00000604030 EIF4G2P78344 907 aaKnown RBP eCLIP28.07■■■□□ 2.08
SH3D19-211ENST00000604030 MTUS2Q5JR59 1369 aa28.07■■■□□ 2.08
SH3D19-211ENST00000604030 ANP32EQ9BTT0 268 aa28.07■■■□□ 2.08
SH3D19-211ENST00000604030 GOLGA3Q08378 1498 aa28.04■■■□□ 2.08
SH3D19-211ENST00000604030 TSPY4P0CV99 314 aa28■■■□□ 2.07
SH3D19-211ENST00000604030 TSPY10P0CW01 314 aa28■■■□□ 2.07
SH3D19-211ENST00000604030 NBR1Q14596 966 aa27.98■■■□□ 2.07
SH3D19-211ENST00000604030 RSF1Q96T23 1441 aaPredicted RBP27.97■■■□□ 2.07
SH3D19-211ENST00000604030 ESF1Q9H501 851 aaKnown RBP27.97■■■□□ 2.07
SH3D19-211ENST00000604030 BECN1Q14457 450 aa27.95■■■□□ 2.07
SH3D19-211ENST00000604030 CEP162Q5TB80 1403 aa27.92■■■□□ 2.06
SH3D19-211ENST00000604030 CHGAP10645 457 aaKnown RBP27.92■■■□□ 2.06
SH3D19-211ENST00000604030 CHIC2Q9UKJ5 165 aa27.92■■■□□ 2.06
SH3D19-211ENST00000604030 STAG3Q9UJ98 1225 aa27.9■■■□□ 2.06
SH3D19-211ENST00000604030 SALL2Q9Y467 1007 aaPredicted RBP27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms