Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGA7Q9Y5G6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGA7Q9Y5G6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDHGA7Q9Y5G6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGA7Q9Y5G6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHGA7Q9Y5G6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGA7Q9Y5G6 AC092296.2-201ENST00000589470 999 ntBASIC24.24■■□□□ 1.47
PCDHGA7Q9Y5G6 MIR219A2-201ENST00000608502 1504 ntBASIC24.24■■□□□ 1.47
PCDHGA7Q9Y5G6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGA7Q9Y5G6 AC091060.1-201ENST00000623524 1766 ntBASIC24.24■■□□□ 1.47
PCDHGA7Q9Y5G6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGA7Q9Y5G6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA7Q9Y5G6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA7Q9Y5G6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA7Q9Y5G6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA7Q9Y5G6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDHGA7Q9Y5G6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA7Q9Y5G6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHGA7Q9Y5G6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.23■■□□□ 1.47
PCDHGA7Q9Y5G6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA7Q9Y5G6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA7Q9Y5G6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA7Q9Y5G6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDHGA7Q9Y5G6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGA7Q9Y5G6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGA7Q9Y5G6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGA7Q9Y5G6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGA7Q9Y5G6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGA7Q9Y5G6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGA7Q9Y5G6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGA7Q9Y5G6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDHGA7Q9Y5G6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
PCDHGA7Q9Y5G6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGA7Q9Y5G6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGA7Q9Y5G6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
PCDHGA7Q9Y5G6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHGA7Q9Y5G6 ECEL1P2-201ENST00000461596 1295 ntBASIC24.2■■□□□ 1.46
PCDHGA7Q9Y5G6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDHGA7Q9Y5G6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGA7Q9Y5G6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGA7Q9Y5G6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.19■■□□□ 1.46
PCDHGA7Q9Y5G6 TSPY13P-201ENST00000338964 914 ntBASIC24.19■■□□□ 1.46
PCDHGA7Q9Y5G6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.19■■□□□ 1.46
PCDHGA7Q9Y5G6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGA7Q9Y5G6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGA7Q9Y5G6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
PCDHGA7Q9Y5G6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.18■■□□□ 1.46
PCDHGA7Q9Y5G6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGA7Q9Y5G6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGA7Q9Y5G6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
PCDHGA7Q9Y5G6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
PCDHGA7Q9Y5G6 AC126177.7-201ENST00000547904 679 ntBASIC24.17■■□□□ 1.46
PCDHGA7Q9Y5G6 AP002414.2-202ENST00000590929 1450 ntBASIC24.17■■□□□ 1.46
PCDHGA7Q9Y5G6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGA7Q9Y5G6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHGA7Q9Y5G6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHGA7Q9Y5G6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGA7Q9Y5G6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGA7Q9Y5G6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHGA7Q9Y5G6 KRT18P60-201ENST00000312876 1297 ntBASIC24.15■■□□□ 1.46
PCDHGA7Q9Y5G6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDHGA7Q9Y5G6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA7Q9Y5G6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHGA7Q9Y5G6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA7Q9Y5G6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA7Q9Y5G6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHGA7Q9Y5G6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.14■■□□□ 1.45
PCDHGA7Q9Y5G6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.14■■□□□ 1.45
PCDHGA7Q9Y5G6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDHGA7Q9Y5G6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGA7Q9Y5G6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGA7Q9Y5G6 AC004987.1-201ENST00000428627 508 ntBASIC24.13■■□□□ 1.45
PCDHGA7Q9Y5G6 ATP5G2P3-201ENST00000429083 425 ntBASIC24.13■■□□□ 1.45
PCDHGA7Q9Y5G6 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.13■■□□□ 1.45
PCDHGA7Q9Y5G6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.13■■□□□ 1.45
PCDHGA7Q9Y5G6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PCDHGA7Q9Y5G6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGA7Q9Y5G6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGA7Q9Y5G6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGA7Q9Y5G6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDHGA7Q9Y5G6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGA7Q9Y5G6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGA7Q9Y5G6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGA7Q9Y5G6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGA7Q9Y5G6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGA7Q9Y5G6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
PCDHGA7Q9Y5G6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGA7Q9Y5G6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDHGA7Q9Y5G6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGA7Q9Y5G6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
PCDHGA7Q9Y5G6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHGA7Q9Y5G6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHGA7Q9Y5G6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PCDHGA7Q9Y5G6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA7Q9Y5G6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA7Q9Y5G6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGA7Q9Y5G6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGA7Q9Y5G6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGA7Q9Y5G6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGA7Q9Y5G6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms