Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SRFBP1Q8NEF9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SRFBP1Q8NEF9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SRFBP1Q8NEF9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SRFBP1Q8NEF9 AC022413.1-201ENST00000624602 984 ntBASIC23.38■■□□□ 1.33
SRFBP1Q8NEF9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SRFBP1Q8NEF9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SRFBP1Q8NEF9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SRFBP1Q8NEF9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SRFBP1Q8NEF9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SRFBP1Q8NEF9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
SRFBP1Q8NEF9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SRFBP1Q8NEF9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
SRFBP1Q8NEF9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.36■■□□□ 1.33
SRFBP1Q8NEF9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.36■■□□□ 1.33
SRFBP1Q8NEF9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.36■■□□□ 1.33
SRFBP1Q8NEF9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SRFBP1Q8NEF9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
SRFBP1Q8NEF9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SRFBP1Q8NEF9 AL359504.2-201ENST00000605506 1601 ntBASIC23.36■■□□□ 1.33
SRFBP1Q8NEF9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SRFBP1Q8NEF9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.36■■□□□ 1.33
SRFBP1Q8NEF9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SRFBP1Q8NEF9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SRFBP1Q8NEF9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SRFBP1Q8NEF9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SRFBP1Q8NEF9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SRFBP1Q8NEF9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.34■■□□□ 1.33
SRFBP1Q8NEF9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SRFBP1Q8NEF9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SRFBP1Q8NEF9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.34■■□□□ 1.33
SRFBP1Q8NEF9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SRFBP1Q8NEF9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
SRFBP1Q8NEF9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SRFBP1Q8NEF9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SRFBP1Q8NEF9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SRFBP1Q8NEF9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SRFBP1Q8NEF9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.33■■□□□ 1.33
SRFBP1Q8NEF9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SRFBP1Q8NEF9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SRFBP1Q8NEF9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SRFBP1Q8NEF9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.33■■□□□ 1.32
SRFBP1Q8NEF9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SRFBP1Q8NEF9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SRFBP1Q8NEF9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
SRFBP1Q8NEF9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.32■■□□□ 1.32
SRFBP1Q8NEF9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SRFBP1Q8NEF9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.32■■□□□ 1.32
SRFBP1Q8NEF9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SRFBP1Q8NEF9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SRFBP1Q8NEF9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SRFBP1Q8NEF9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SRFBP1Q8NEF9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SRFBP1Q8NEF9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.31■■□□□ 1.32
SRFBP1Q8NEF9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SRFBP1Q8NEF9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SRFBP1Q8NEF9 AC092296.2-201ENST00000589470 999 ntBASIC23.31■■□□□ 1.32
SRFBP1Q8NEF9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SRFBP1Q8NEF9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SRFBP1Q8NEF9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SRFBP1Q8NEF9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
SRFBP1Q8NEF9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.3■■□□□ 1.32
SRFBP1Q8NEF9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SRFBP1Q8NEF9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SRFBP1Q8NEF9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SRFBP1Q8NEF9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.3■■□□□ 1.32
SRFBP1Q8NEF9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SRFBP1Q8NEF9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SRFBP1Q8NEF9 GPX1-201ENST00000419349 1106 ntBASIC23.29■■□□□ 1.32
SRFBP1Q8NEF9 ECEL1P2-201ENST00000461596 1295 ntBASIC23.29■■□□□ 1.32
SRFBP1Q8NEF9 AL157400.5-201ENST00000507624 621 ntBASIC23.29■■□□□ 1.32
SRFBP1Q8NEF9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SRFBP1Q8NEF9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.29■■□□□ 1.32
SRFBP1Q8NEF9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SRFBP1Q8NEF9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SRFBP1Q8NEF9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.28■■□□□ 1.32
SRFBP1Q8NEF9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.28■■□□□ 1.32
SRFBP1Q8NEF9 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.28■■□□□ 1.32
SRFBP1Q8NEF9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.27■■□□□ 1.32
SRFBP1Q8NEF9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SRFBP1Q8NEF9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.27■■□□□ 1.32
SRFBP1Q8NEF9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.27■■□□□ 1.32
SRFBP1Q8NEF9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
SRFBP1Q8NEF9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.27■■□□□ 1.32
SRFBP1Q8NEF9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
SRFBP1Q8NEF9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.26■■□□□ 1.31
SRFBP1Q8NEF9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SRFBP1Q8NEF9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.26■■□□□ 1.31
SRFBP1Q8NEF9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
SRFBP1Q8NEF9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SRFBP1Q8NEF9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.26■■□□□ 1.31
SRFBP1Q8NEF9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
SRFBP1Q8NEF9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SRFBP1Q8NEF9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SRFBP1Q8NEF9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SRFBP1Q8NEF9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.25■■□□□ 1.31
SRFBP1Q8NEF9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.25■■□□□ 1.31
SRFBP1Q8NEF9 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.25■■□□□ 1.31
SRFBP1Q8NEF9 SMPD5-203ENST00000639008 1464 ntBASIC23.24■■□□□ 1.31
SRFBP1Q8NEF9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms