Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
VPS16Q9H269 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
VPS16Q9H269 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
VPS16Q9H269 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
VPS16Q9H269 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.07■■□□□ 1.92
VPS16Q9H269 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.07■■□□□ 1.92
VPS16Q9H269 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
VPS16Q9H269 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
VPS16Q9H269 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
VPS16Q9H269 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
VPS16Q9H269 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
VPS16Q9H269 AC020928.2-201ENST00000588717 2197 ntBASIC27.05■■□□□ 1.92
VPS16Q9H269 DUSP8P4-201ENST00000399538 1761 ntBASIC27.05■■□□□ 1.92
VPS16Q9H269 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
VPS16Q9H269 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
VPS16Q9H269 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
VPS16Q9H269 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.04■■□□□ 1.92
VPS16Q9H269 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
VPS16Q9H269 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.04■■□□□ 1.92
VPS16Q9H269 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
VPS16Q9H269 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.04■■□□□ 1.92
VPS16Q9H269 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
VPS16Q9H269 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.03■■□□□ 1.92
VPS16Q9H269 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
VPS16Q9H269 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
VPS16Q9H269 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
VPS16Q9H269 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC27.02■■□□□ 1.92
VPS16Q9H269 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
VPS16Q9H269 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
VPS16Q9H269 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.02■■□□□ 1.92
VPS16Q9H269 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
VPS16Q9H269 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
VPS16Q9H269 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
VPS16Q9H269 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
VPS16Q9H269 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
VPS16Q9H269 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.01■■□□□ 1.91
VPS16Q9H269 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
VPS16Q9H269 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.01■■□□□ 1.91
VPS16Q9H269 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.01■■□□□ 1.91
VPS16Q9H269 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
VPS16Q9H269 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
VPS16Q9H269 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27■■□□□ 1.91
VPS16Q9H269 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
VPS16Q9H269 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
VPS16Q9H269 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
VPS16Q9H269 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.98■■□□□ 1.91
VPS16Q9H269 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
VPS16Q9H269 RPS2P35-201ENST00000443417 897 ntBASIC26.98■■□□□ 1.91
VPS16Q9H269 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.98■■□□□ 1.91
VPS16Q9H269 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
VPS16Q9H269 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.98■■□□□ 1.91
VPS16Q9H269 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
VPS16Q9H269 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
VPS16Q9H269 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
VPS16Q9H269 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
VPS16Q9H269 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
VPS16Q9H269 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
VPS16Q9H269 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.96■■□□□ 1.91
VPS16Q9H269 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
VPS16Q9H269 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
VPS16Q9H269 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
VPS16Q9H269 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
VPS16Q9H269 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
VPS16Q9H269 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
VPS16Q9H269 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
VPS16Q9H269 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
VPS16Q9H269 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.94■■□□□ 1.9
VPS16Q9H269 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.94■■□□□ 1.9
VPS16Q9H269 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
VPS16Q9H269 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
VPS16Q9H269 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
VPS16Q9H269 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
VPS16Q9H269 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.93■■□□□ 1.9
VPS16Q9H269 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.93■■□□□ 1.9
VPS16Q9H269 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
VPS16Q9H269 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
VPS16Q9H269 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
VPS16Q9H269 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.92■■□□□ 1.9
VPS16Q9H269 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
VPS16Q9H269 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
VPS16Q9H269 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.91■■□□□ 1.9
VPS16Q9H269 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.91■■□□□ 1.9
VPS16Q9H269 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
VPS16Q9H269 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
VPS16Q9H269 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
VPS16Q9H269 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
VPS16Q9H269 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
VPS16Q9H269 LINC01971-201ENST00000617888 1048 ntBASIC26.9■■□□□ 1.9
VPS16Q9H269 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
VPS16Q9H269 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
VPS16Q9H269 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
VPS16Q9H269 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.89■■□□□ 1.9
VPS16Q9H269 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
VPS16Q9H269 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.89■■□□□ 1.89
VPS16Q9H269 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
VPS16Q9H269 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
VPS16Q9H269 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
VPS16Q9H269 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
VPS16Q9H269 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
VPS16Q9H269 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms