Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
TBC1D3BA6NDS4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
TBC1D3BA6NDS4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TBC1D3BA6NDS4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TBC1D3BA6NDS4 AC093536.1-201ENST00000569153 554 ntBASIC25.33■■□□□ 1.65
TBC1D3BA6NDS4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
TBC1D3BA6NDS4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.33■■□□□ 1.64
TBC1D3BA6NDS4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TBC1D3BA6NDS4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TBC1D3BA6NDS4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.31■■□□□ 1.64
TBC1D3BA6NDS4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.31■■□□□ 1.64
TBC1D3BA6NDS4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
TBC1D3BA6NDS4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.31■■□□□ 1.64
TBC1D3BA6NDS4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TBC1D3BA6NDS4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TBC1D3BA6NDS4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
TBC1D3BA6NDS4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.3■■□□□ 1.64
TBC1D3BA6NDS4 MIR3960-201ENST00000583311 91 ntBASIC25.3■■□□□ 1.64
TBC1D3BA6NDS4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.3■■□□□ 1.64
TBC1D3BA6NDS4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.3■■□□□ 1.64
TBC1D3BA6NDS4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TBC1D3BA6NDS4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
TBC1D3BA6NDS4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TBC1D3BA6NDS4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
TBC1D3BA6NDS4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.29■■□□□ 1.64
TBC1D3BA6NDS4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TBC1D3BA6NDS4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
TBC1D3BA6NDS4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.28■■□□□ 1.64
TBC1D3BA6NDS4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.28■■□□□ 1.64
TBC1D3BA6NDS4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TBC1D3BA6NDS4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.28■■□□□ 1.64
TBC1D3BA6NDS4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TBC1D3BA6NDS4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
TBC1D3BA6NDS4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TBC1D3BA6NDS4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.27■■□□□ 1.64
TBC1D3BA6NDS4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TBC1D3BA6NDS4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TBC1D3BA6NDS4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.27■■□□□ 1.64
TBC1D3BA6NDS4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
TBC1D3BA6NDS4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TBC1D3BA6NDS4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
TBC1D3BA6NDS4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
TBC1D3BA6NDS4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.26■■□□□ 1.63
TBC1D3BA6NDS4 RARRES2P1-201ENST00000474487 481 ntBASIC25.26■■□□□ 1.63
TBC1D3BA6NDS4 RAP2CP1-202ENST00000605179 643 ntBASIC25.26■■□□□ 1.63
TBC1D3BA6NDS4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TBC1D3BA6NDS4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
TBC1D3BA6NDS4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.25■■□□□ 1.63
TBC1D3BA6NDS4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TBC1D3BA6NDS4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TBC1D3BA6NDS4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
TBC1D3BA6NDS4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TBC1D3BA6NDS4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TBC1D3BA6NDS4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TBC1D3BA6NDS4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TBC1D3BA6NDS4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TBC1D3BA6NDS4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.23■■□□□ 1.63
TBC1D3BA6NDS4 DUX4L9-201ENST00000449051 1259 ntBASIC25.23■■□□□ 1.63
TBC1D3BA6NDS4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TBC1D3BA6NDS4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.22■■□□□ 1.63
TBC1D3BA6NDS4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TBC1D3BA6NDS4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.22■■□□□ 1.63
TBC1D3BA6NDS4 AL359504.2-201ENST00000605506 1601 ntBASIC25.22■■□□□ 1.63
TBC1D3BA6NDS4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
TBC1D3BA6NDS4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TBC1D3BA6NDS4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TBC1D3BA6NDS4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.21■■□□□ 1.63
TBC1D3BA6NDS4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
TBC1D3BA6NDS4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.21■■□□□ 1.63
TBC1D3BA6NDS4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
TBC1D3BA6NDS4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.21■■□□□ 1.63
TBC1D3BA6NDS4 WHAMMP3-201ENST00000611636 1609 ntBASIC25.2■■□□□ 1.62
TBC1D3BA6NDS4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
TBC1D3BA6NDS4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TBC1D3BA6NDS4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.19■■□□□ 1.62
TBC1D3BA6NDS4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
TBC1D3BA6NDS4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.19■■□□□ 1.62
TBC1D3BA6NDS4 BHLHE23-202ENST00000612929 1109 ntBASIC25.19■■□□□ 1.62
TBC1D3BA6NDS4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
TBC1D3BA6NDS4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
TBC1D3BA6NDS4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
TBC1D3BA6NDS4 SPCS2P3-201ENST00000500401 656 ntBASIC25.17■■□□□ 1.62
TBC1D3BA6NDS4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TBC1D3BA6NDS4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
TBC1D3BA6NDS4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
TBC1D3BA6NDS4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.16■■□□□ 1.62
TBC1D3BA6NDS4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TBC1D3BA6NDS4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
TBC1D3BA6NDS4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
TBC1D3BA6NDS4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
TBC1D3BA6NDS4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
TBC1D3BA6NDS4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
TBC1D3BA6NDS4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
TBC1D3BA6NDS4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
TBC1D3BA6NDS4 AC139426.1-201ENST00000568218 2529 ntBASIC25.14■■□□□ 1.61
TBC1D3BA6NDS4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
TBC1D3BA6NDS4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TBC1D3BA6NDS4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.13■■□□□ 1.61
TBC1D3BA6NDS4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TBC1D3BA6NDS4 AC018755.3-202ENST00000596210 929 ntBASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms