Protein–RNA interactions for Protein: Q9Y221

NIP7, 60S ribosome subunit biogenesis protein NIP7 homolog, humanhuman

Known RBP eCLIP

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7Q9Y221 LRP5-205ENST00000529702 586 ntTSL 315.11■□□□□ 0.015e-11■■□□□ 11.8
NIP7Q9Y221 RPS21-201ENST00000343986 344 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.41e-12■■□□□ 11.8
NIP7Q9Y221 LRP5-204ENST00000529481 551 ntTSL 311.8□□□□□ -0.525e-11■■□□□ 11.8
NIP7Q9Y221 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.732e-6■■□□□ 11.8
NIP7Q9Y221 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.52■■□□□ 1.041e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-203ENST00000420199 1002 ntTSL 320.36■□□□□ 0.851e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-215ENST00000623163 851 ntTSL 519.17■□□□□ 0.661e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-209ENST00000435947 696 ntTSL 218.24■□□□□ 0.511e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC16.46■□□□□ 0.231e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-206ENST00000428833 641 ntTSL 216.04■□□□□ 0.161e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-210ENST00000453754 401 ntTSL 316.04■□□□□ 0.161e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-207ENST00000431043 998 ntTSL 215.81■□□□□ 0.121e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC15.81■□□□□ 0.121e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-212ENST00000589187 568 ntTSL 4 BASIC14.15□□□□□ -0.141e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-202ENST00000414002 430 ntTSL 212.88□□□□□ -0.351e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-220ENST00000624128 672 ntTSL 211.12□□□□□ -0.631e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC10.46□□□□□ -0.731e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-217ENST00000623650 886 ntTSL 510.13□□□□□ -0.791e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC8.14□□□□□ -1.111e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.8□□□□□ -1.321e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-216ENST00000623267 374 ntTSL 56.8□□□□□ -1.321e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.24□□□□□ -1.731e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-205ENST00000427501 680 ntTSL 23.82□□□□□ -1.81e-323■■□□□ 11.8
NIP7Q9Y221 SNHG5-208ENST00000433843 388 ntTSL 21.82□□□□□ -2.121e-323■■□□□ 11.8
NIP7Q9Y221 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.111e-323■■□□□ 11.8
NIP7Q9Y221 WDR43-201ENST00000296126 787 ntTSL 54.05□□□□□ -1.761e-323■■□□□ 11.8
NIP7Q9Y221 WDR43-204ENST00000440983 541 ntTSL 43.32□□□□□ -1.881e-323■■□□□ 11.8
NIP7Q9Y221 SNORD92-201ENST00000585078 85 ntBASIC0.54□□□□□ -2.321e-323■■□□□ 11.8
NIP7Q9Y221 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.991e-32■■□□□ 11.7
NIP7Q9Y221 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.881e-32■■□□□ 11.7
NIP7Q9Y221 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.57■■□□□ 1.841e-32■■□□□ 11.7
NIP7Q9Y221 FN1-215ENST00000461974 571 ntTSL 23.23□□□□□ -1.893e-50■■□□□ 11.7
NIP7Q9Y221 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC16.04■□□□□ 0.162e-12■■□□□ 11.5
NIP7Q9Y221 RPS21-203ENST00000370592 401 ntTSL 215.84■□□□□ 0.132e-12■■□□□ 11.5
NIP7Q9Y221 RPS21-204ENST00000450116 418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.052e-12■■□□□ 11.5
NIP7Q9Y221 AHSG-203ENST00000478441 1269 ntTSL 217.31■□□□□ 0.361e-65■■□□□ 11.5
NIP7Q9Y221 FN1-213ENST00000456923 3720 ntTSL 27.79□□□□□ -1.165e-29■■□□□ 11.5
NIP7Q9Y221 FN1-224ENST00000492816 9171 ntTSL 56.23□□□□□ -1.415e-29■■□□□ 11.5
NIP7Q9Y221 TF-210ENST00000482271 659 ntTSL 424.18■■□□□ 1.463e-42■■□□□ 11.5
NIP7Q9Y221 EPAS1-202ENST00000449347 1067 ntTSL 324.97■■□□□ 1.596e-9■■□□□ 11.4
NIP7Q9Y221 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.376e-9■■□□□ 11.4
NIP7Q9Y221 AC124312.3-201ENST00000567527 1236 ntBASIC14.65□□□□□ -0.066e-9■■□□□ 11.4
NIP7Q9Y221 EPAS1-204ENST00000463191 559 ntTSL 28.09□□□□□ -1.116e-9■■□□□ 11.4
NIP7Q9Y221 SNORD116-20-201ENST00000384529 92 ntBASIC2.2□□□□□ -2.066e-9■■□□□ 11.4
NIP7Q9Y221 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.984e-13■□□□□ 11.3
NIP7Q9Y221 AMBP-204ENST00000603230 1057 ntTSL 1 (best)19.87■□□□□ 0.778e-12■□□□□ 11.3
NIP7Q9Y221 AMBP-202ENST00000466610 579 ntTSL 313.92□□□□□ -0.188e-12■□□□□ 11.3
NIP7Q9Y221 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC14.07□□□□□ -0.163e-24■□□□□ 11.2
NIP7Q9Y221 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC13.93□□□□□ -0.183e-24■□□□□ 11.2
NIP7Q9Y221 FN1-206ENST00000359671 8524 ntTSL 5 BASIC13.66□□□□□ -0.223e-24■□□□□ 11.2
NIP7Q9Y221 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC13.47□□□□□ -0.253e-24■□□□□ 11.2
NIP7Q9Y221 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC13.11□□□□□ -0.313e-24■□□□□ 11.2
NIP7Q9Y221 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC13□□□□□ -0.333e-24■□□□□ 11.2
NIP7Q9Y221 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC12.79□□□□□ -0.363e-24■□□□□ 11.2
NIP7Q9Y221 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC12.76□□□□□ -0.373e-24■□□□□ 11.2
NIP7Q9Y221 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.43e-24■□□□□ 11.2
NIP7Q9Y221 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC11.69□□□□□ -0.543e-24■□□□□ 11.2
NIP7Q9Y221 HLA-A-207ENST00000495183 1766 nt31.19■■■□□ 2.586e-6■□□□□ 11.1
NIP7Q9Y221 HLA-A-201ENST00000376802 1334 ntBASIC23.16■■□□□ 1.36e-6■□□□□ 11.1
NIP7Q9Y221 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC22.5■■□□□ 1.196e-6■□□□□ 11.1
NIP7Q9Y221 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.96■■□□□ 1.116e-6■□□□□ 11.1
NIP7Q9Y221 HLA-A-202ENST00000376806 1854 ntBASIC20.21■□□□□ 0.836e-6■□□□□ 11.1
NIP7Q9Y221 HLA-A-208ENST00000496081 1786 nt20.03■□□□□ 0.86e-6■□□□□ 11.1
NIP7Q9Y221 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.526e-6■□□□□ 11.1
NIP7Q9Y221 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.38■□□□□ 0.053e-27■□□□□ 11.1
NIP7Q9Y221 SERPINE1-201ENST00000223095 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.561e-6■□□□□ 11.1
NIP7Q9Y221 AMBP-203ENST00000540645 1356 ntTSL 216.17■□□□□ 0.185e-10■□□□□ 11.1
NIP7Q9Y221 FN1-227ENST00000498719 2433 ntTSL 210.04□□□□□ -0.82e-52■□□□□ 11.1
NIP7Q9Y221 FN1-225ENST00000494446 676 ntTSL 29.3□□□□□ -0.922e-52■□□□□ 11.1
NIP7Q9Y221 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.29■■□□□ 13e-33■□□□□ 11
NIP7Q9Y221 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.244e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.784e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-227ENST00000552902 869 ntTSL 226.17■■□□□ 1.784e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-222ENST00000551336 406 ntTSL 326.11■■□□□ 1.774e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-223ENST00000551783 676 ntTSL 225.52■■□□□ 1.684e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.394e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-211ENST00000582648 1013 ntTSL 523.41■■□□□ 1.344e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-218ENST00000550856 1003 ntTSL 222.31■■□□□ 1.164e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-222ENST00000584908 1316 ntTSL 1 (best)21.04■□□□□ 0.964e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-212ENST00000582788 2004 ntTSL 520.62■□□□□ 0.894e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.53■□□□□ 0.884e-6■□□□□ 10.9
NIP7Q9Y221 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.48■□□□□ 0.874e-6■□□□□ 10.9
NIP7Q9Y221 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.6■□□□□ 0.574e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-226ENST00000552461 2591 ntTSL 218.45■□□□□ 0.544e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-206ENST00000546990 770 ntTSL 318.41■□□□□ 0.544e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-204ENST00000546564 844 ntTSL 216.57■□□□□ 0.244e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-216ENST00000550296 562 ntTSL 216.57■□□□□ 0.244e-6■□□□□ 10.9
NIP7Q9Y221 CYB5R3-208ENST00000470741 3938 ntTSL 1 (best)15.67■□□□□ 0.14e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-215ENST00000549242 518 ntTSL 215.45■□□□□ 0.064e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-205ENST00000546989 993 ntTSL 5 BASIC15.45■□□□□ 0.064e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-209ENST00000547211 781 ntTSL 315.45■□□□□ 0.064e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC14.54□□□□□ -0.084e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-214ENST00000549098 1106 ntTSL 214.31□□□□□ -0.124e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-217ENST00000550423 561 ntTSL 314.26□□□□□ -0.134e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-203ENST00000392514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.134e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC14.2□□□□□ -0.144e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC13.99□□□□□ -0.174e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-218ENST00000584450 3730 ntTSL 1 (best) BASIC13.9□□□□□ -0.184e-6■□□□□ 10.9
NIP7Q9Y221 ERBB2-206ENST00000578373 4523 ntTSL 1 (best)13.75□□□□□ -0.214e-6■□□□□ 10.9
NIP7Q9Y221 RPLP0-202ENST00000313104 912 ntTSL 1 (best) BASIC13.64□□□□□ -0.234e-6■□□□□ 10.9
Retrieved 100 of 1,619 protein–RNA pairs in 116.1 ms